PMC:7275193 / 4034-4421
Annnotations
LitCovid-PMC-OGER-BB
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T55 | 48-55 | UBERON:0000175 | denotes | pleural |
T56 | 102-106 | UBERON:3010752 | denotes | lobe |
T57 | 197-204 | UBERON:0000922;GO:0009790 | denotes | empyema |
T58 | 205-214 | GO:0007492 | denotes | formation |
T59 | 235-244 | UBERON:0000101 | denotes | lung lobe |
T60 | 307-312 | UBERON:0000178 | denotes | blood |
T61 | 317-323 | UBERON:0007311 | denotes | sputum |
T62 | 340-344 | CHEBI:37527;CHEBI:37527 | denotes | acid |
T96450 | 48-55 | UBERON:0000175 | denotes | pleural |
T65828 | 102-106 | UBERON:3010752 | denotes | lobe |
T25744 | 197-204 | UBERON:0000922;GO:0009790 | denotes | empyema |
T2543 | 205-214 | GO:0007492 | denotes | formation |
T24147 | 235-244 | UBERON:0000101 | denotes | lung lobe |
T49310 | 307-312 | UBERON:0000178 | denotes | blood |
T46406 | 317-323 | UBERON:0007311 | denotes | sputum |
T77011 | 340-344 | CHEBI:37527;CHEBI:37527 | denotes | acid |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T14 | 0-5 | Body_part | denotes | Chest | http://purl.org/sig/ont/fma/fma9576 |
T15 | 235-239 | Body_part | denotes | lung | http://purl.org/sig/ont/fma/fma7195 |
T16 | 307-312 | Body_part | denotes | blood | http://purl.org/sig/ont/fma/fma9670 |
T17 | 317-323 | Body_part | denotes | sputum | http://purl.org/sig/ont/fma/fma312401 |
LitCovid-PD-UBERON
Id | Subject | Object | Predicate | Lexical cue | uberon_id |
---|---|---|---|---|---|
T16 | 0-5 | Body_part | denotes | Chest | http://purl.obolibrary.org/obo/UBERON_0001443 |
T17 | 48-65 | Body_part | denotes | pleural effusions | http://purl.obolibrary.org/obo/UBERON_0000175 |
T18 | 102-106 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
T19 | 235-239 | Body_part | denotes | lung | http://purl.obolibrary.org/obo/UBERON_0002048 |
T20 | 240-244 | Body_part | denotes | lobe | http://purl.obolibrary.org/obo/UBERON_3010752 |
T21 | 307-312 | Body_part | denotes | blood | http://purl.obolibrary.org/obo/UBERON_0000178 |
T22 | 317-323 | Body_part | denotes | sputum | http://purl.obolibrary.org/obo/UBERON_0007311 |
LitCovid-PD-HP
Id | Subject | Object | Predicate | Lexical cue | hp_id |
---|---|---|---|---|---|
T33 | 48-65 | Phenotype | denotes | pleural effusions | http://purl.obolibrary.org/obo/HP_0002202 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T60 | 197-204 | Disease | denotes | empyema | http://purl.obolibrary.org/obo/MONDO_0005242|http://purl.obolibrary.org/obo/MONDO_0018667 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T60 | 0-5 | http://www.ebi.ac.uk/efo/EFO_0000965 | denotes | Chest |
T61 | 48-65 | http://purl.obolibrary.org/obo/UBERON_0000175 | denotes | pleural effusions |
T62 | 150-151 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T63 | 235-239 | http://purl.obolibrary.org/obo/UBERON_0002048 | denotes | lung |
T64 | 235-239 | http://www.ebi.ac.uk/efo/EFO_0000934 | denotes | lung |
T65 | 277-281 | http://purl.obolibrary.org/obo/CLO_0001302 | denotes | 3, 4 |
T66 | 307-312 | http://purl.obolibrary.org/obo/UBERON_0000178 | denotes | blood |
T67 | 307-312 | http://www.ebi.ac.uk/efo/EFO_0000296 | denotes | blood |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T24 | 340-344 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2 | 205-214 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | formation |
T3 | 297-303 | http://purl.obolibrary.org/obo/GO_0040007 | denotes | growth |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T33 | 0-283 | Sentence | denotes | Chest computed tomography (CT) showed bilateral pleural effusions evident on the left side with lower lobe subsegmental collapse and consolidation as a consequence as well as likely right anterior empyema formation and bilateral lower lung lobe post-inflammatory changes (Fig. 3, 4). |
T34 | 284-333 | Sentence | denotes | There was no growth in blood nor sputum cultures. |
T35 | 334-387 | Sentence | denotes | Also, acid fast bacilli smears and PCR were negative. |
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
130 | 48-65 | Disease | denotes | pleural effusions | MESH:D010996 |
131 | 188-204 | Disease | denotes | anterior empyema | MESH:D004653 |