PMC:7275193 / 3721-4033 JSONTXT

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T50","span":{"begin":4,"end":9},"obj":"UBERON:0001443"},{"id":"T51","span":{"begin":33,"end":38},"obj":"UBERON:0000101"},{"id":"T52","span":{"begin":39,"end":43},"obj":"UBERON:3010752"},{"id":"T53","span":{"begin":76,"end":83},"obj":"UBERON:0000175"},{"id":"T54","span":{"begin":277,"end":285},"obj":"SP_7"},{"id":"T31758","span":{"begin":4,"end":9},"obj":"UBERON:0001443"},{"id":"T52706","span":{"begin":33,"end":38},"obj":"UBERON:0000101"},{"id":"T42231","span":{"begin":39,"end":43},"obj":"UBERON:3010752"},{"id":"T37353","span":{"begin":76,"end":83},"obj":"UBERON:0000175"},{"id":"T43144","span":{"begin":277,"end":285},"obj":"SP_7"}],"text":"The chest X-ray showed bilateral lower lobe collapse and consolidation with pleural effusion, more noted on the left side, which is increased compared to baseline (Fig. 2). Considering the patient's background, clinical presentation and the current pandemic, we tested him for COVID-19 and it came back positive."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T12","span":{"begin":4,"end":9},"obj":"Body_part"},{"id":"T13","span":{"begin":298,"end":302},"obj":"Body_part"}],"attributes":[{"id":"A12","pred":"fma_id","subj":"T12","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A13","pred":"fma_id","subj":"T13","obj":"http://purl.org/sig/ont/fma/fma25056"}],"text":"The chest X-ray showed bilateral lower lobe collapse and consolidation with pleural effusion, more noted on the left side, which is increased compared to baseline (Fig. 2). Considering the patient's background, clinical presentation and the current pandemic, we tested him for COVID-19 and it came back positive."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T13","span":{"begin":4,"end":9},"obj":"Body_part"},{"id":"T14","span":{"begin":39,"end":43},"obj":"Body_part"},{"id":"T15","span":{"begin":76,"end":92},"obj":"Body_part"}],"attributes":[{"id":"A13","pred":"uberon_id","subj":"T13","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"},{"id":"A14","pred":"uberon_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/UBERON_3010752"},{"id":"A15","pred":"uberon_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/UBERON_0000175"}],"text":"The chest X-ray showed bilateral lower lobe collapse and consolidation with pleural effusion, more noted on the left side, which is increased compared to baseline (Fig. 2). Considering the patient's background, clinical presentation and the current pandemic, we tested him for COVID-19 and it came back positive."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T32","span":{"begin":76,"end":92},"obj":"Phenotype"}],"attributes":[{"id":"A32","pred":"hp_id","subj":"T32","obj":"http://purl.obolibrary.org/obo/HP_0002202"}],"text":"The chest X-ray showed bilateral lower lobe collapse and consolidation with pleural effusion, more noted on the left side, which is increased compared to baseline (Fig. 2). Considering the patient's background, clinical presentation and the current pandemic, we tested him for COVID-19 and it came back positive."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T59","span":{"begin":277,"end":285},"obj":"Disease"}],"attributes":[{"id":"A59","pred":"mondo_id","subj":"T59","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"The chest X-ray showed bilateral lower lobe collapse and consolidation with pleural effusion, more noted on the left side, which is increased compared to baseline (Fig. 2). Considering the patient's background, clinical presentation and the current pandemic, we tested him for COVID-19 and it came back positive."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T57","span":{"begin":4,"end":9},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"},{"id":"T58","span":{"begin":76,"end":92},"obj":"http://purl.obolibrary.org/obo/UBERON_0000175"},{"id":"T59","span":{"begin":262,"end":268},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"}],"text":"The chest X-ray showed bilateral lower lobe collapse and consolidation with pleural effusion, more noted on the left side, which is increased compared to baseline (Fig. 2). Considering the patient's background, clinical presentation and the current pandemic, we tested him for COVID-19 and it came back positive."}

{"project":"LitCovid-sentences","denotations":[{"id":"T31","span":{"begin":0,"end":172},"obj":"Sentence"},{"id":"T32","span":{"begin":173,"end":312},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"The chest X-ray showed bilateral lower lobe collapse and consolidation with pleural effusion, more noted on the left side, which is increased compared to baseline (Fig. 2). Considering the patient's background, clinical presentation and the current pandemic, we tested him for COVID-19 and it came back positive."}

{"project":"LitCovid-PubTator","denotations":[{"id":"125","span":{"begin":189,"end":196},"obj":"Species"},{"id":"126","span":{"begin":76,"end":92},"obj":"Disease"},{"id":"127","span":{"begin":277,"end":285},"obj":"Disease"}],"attributes":[{"id":"A125","pred":"tao:has_database_id","subj":"125","obj":"Tax:9606"},{"id":"A126","pred":"tao:has_database_id","subj":"126","obj":"MESH:D010996"},{"id":"A127","pred":"tao:has_database_id","subj":"127","obj":"MESH:C000657245"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"The chest X-ray showed bilateral lower lobe collapse and consolidation with pleural effusion, more noted on the left side, which is increased compared to baseline (Fig. 2). Considering the patient's background, clinical presentation and the current pandemic, we tested him for COVID-19 and it came back positive."}