PMC:7275193 / 2047-2634 JSONTXT

{"project":"LitCovid-PMC-OGER-BB","denotations":[{"id":"T31","span":{"begin":50,"end":61},"obj":"CL:0000763"},{"id":"T32","span":{"begin":318,"end":324},"obj":"UBERON:0007311"},{"id":"T33","span":{"begin":352,"end":357},"obj":"UBERON:0001443"},{"id":"T34","span":{"begin":410,"end":414},"obj":"UBERON:0000004"},{"id":"T35","span":{"begin":421,"end":427},"obj":"UBERON:0000341"},{"id":"T36","span":{"begin":437,"end":442},"obj":"GO:0007608"},{"id":"T37","span":{"begin":446,"end":451},"obj":"GO:0050909"},{"id":"T38","span":{"begin":559,"end":567},"obj":"SP_7"},{"id":"T87066","span":{"begin":50,"end":61},"obj":"CL:0000763"},{"id":"T66593","span":{"begin":318,"end":324},"obj":"UBERON:0007311"},{"id":"T39725","span":{"begin":352,"end":357},"obj":"UBERON:0001443"},{"id":"T86265","span":{"begin":410,"end":414},"obj":"UBERON:0000004"},{"id":"T28470","span":{"begin":421,"end":427},"obj":"UBERON:0000341"},{"id":"T22437","span":{"begin":437,"end":442},"obj":"GO:0007608"},{"id":"T21556","span":{"begin":446,"end":451},"obj":"GO:0050909"},{"id":"T93777","span":{"begin":559,"end":567},"obj":"SP_7"}],"text":"A 65-year-old male with accelerated phase chronic myelogenous leukemia (AP-CML) presented to the emergency department with a 3-day history of febrile sensation (not measured by the patient) and progressive shortness of breath, mainly with exertion. Also, he had had a productive cough with a small amount of yellowish sputum and intermittent pleuritic chest pain for a few days. He denied any history of runny nose, sore throat, loss of smell or taste sense, night sweating, or weight loss. There was no history of contact with sick patients, especially with COVID-19, nor recent travel."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T2","span":{"begin":318,"end":324},"obj":"Body_part"},{"id":"T3","span":{"begin":352,"end":357},"obj":"Body_part"},{"id":"T4","span":{"begin":410,"end":414},"obj":"Body_part"},{"id":"T5","span":{"begin":421,"end":427},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"fma_id","subj":"T2","obj":"http://purl.org/sig/ont/fma/fma312401"},{"id":"A3","pred":"fma_id","subj":"T3","obj":"http://purl.org/sig/ont/fma/fma9576"},{"id":"A4","pred":"fma_id","subj":"T4","obj":"http://purl.org/sig/ont/fma/fma46472"},{"id":"A5","pred":"fma_id","subj":"T5","obj":"http://purl.org/sig/ont/fma/fma228738"}],"text":"A 65-year-old male with accelerated phase chronic myelogenous leukemia (AP-CML) presented to the emergency department with a 3-day history of febrile sensation (not measured by the patient) and progressive shortness of breath, mainly with exertion. Also, he had had a productive cough with a small amount of yellowish sputum and intermittent pleuritic chest pain for a few days. He denied any history of runny nose, sore throat, loss of smell or taste sense, night sweating, or weight loss. There was no history of contact with sick patients, especially with COVID-19, nor recent travel."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T2","span":{"begin":318,"end":324},"obj":"Body_part"},{"id":"T3","span":{"begin":352,"end":357},"obj":"Body_part"},{"id":"T4","span":{"begin":410,"end":414},"obj":"Body_part"},{"id":"T5","span":{"begin":421,"end":427},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/UBERON_0007311"},{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/UBERON_0001443"},{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/UBERON_0000004"},{"id":"A5","pred":"uberon_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/UBERON_0000341"}],"text":"A 65-year-old male with accelerated phase chronic myelogenous leukemia (AP-CML) presented to the emergency department with a 3-day history of febrile sensation (not measured by the patient) and progressive shortness of breath, mainly with exertion. Also, he had had a productive cough with a small amount of yellowish sputum and intermittent pleuritic chest pain for a few days. He denied any history of runny nose, sore throat, loss of smell or taste sense, night sweating, or weight loss. There was no history of contact with sick patients, especially with COVID-19, nor recent travel."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T18","span":{"begin":42,"end":70},"obj":"Phenotype"},{"id":"T19","span":{"begin":206,"end":225},"obj":"Phenotype"},{"id":"T20","span":{"begin":268,"end":284},"obj":"Phenotype"},{"id":"T21","span":{"begin":352,"end":362},"obj":"Phenotype"},{"id":"T22","span":{"begin":404,"end":414},"obj":"Phenotype"},{"id":"T23","span":{"begin":416,"end":427},"obj":"Phenotype"},{"id":"T24","span":{"begin":429,"end":442},"obj":"Phenotype"},{"id":"T25","span":{"begin":465,"end":473},"obj":"Phenotype"},{"id":"T26","span":{"begin":478,"end":489},"obj":"Phenotype"}],"attributes":[{"id":"A18","pred":"hp_id","subj":"T18","obj":"http://purl.obolibrary.org/obo/HP_0005506"},{"id":"A19","pred":"hp_id","subj":"T19","obj":"http://purl.obolibrary.org/obo/HP_0002098"},{"id":"A20","pred":"hp_id","subj":"T20","obj":"http://purl.obolibrary.org/obo/HP_0031245"},{"id":"A21","pred":"hp_id","subj":"T21","obj":"http://purl.obolibrary.org/obo/HP_0100749"},{"id":"A22","pred":"hp_id","subj":"T22","obj":"http://purl.obolibrary.org/obo/HP_0031417"},{"id":"A23","pred":"hp_id","subj":"T23","obj":"http://purl.obolibrary.org/obo/HP_0033050"},{"id":"A24","pred":"hp_id","subj":"T24","obj":"http://purl.obolibrary.org/obo/HP_0000458"},{"id":"A25","pred":"hp_id","subj":"T25","obj":"http://purl.obolibrary.org/obo/HP_0000975"},{"id":"A26","pred":"hp_id","subj":"T26","obj":"http://purl.obolibrary.org/obo/HP_0001824"}],"text":"A 65-year-old male with accelerated phase chronic myelogenous leukemia (AP-CML) presented to the emergency department with a 3-day history of febrile sensation (not measured by the patient) and progressive shortness of breath, mainly with exertion. Also, he had had a productive cough with a small amount of yellowish sputum and intermittent pleuritic chest pain for a few days. He denied any history of runny nose, sore throat, loss of smell or taste sense, night sweating, or weight loss. There was no history of contact with sick patients, especially with COVID-19, nor recent travel."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T40","span":{"begin":24,"end":70},"obj":"Disease"},{"id":"T41","span":{"begin":42,"end":70},"obj":"Disease"},{"id":"T42","span":{"begin":50,"end":70},"obj":"Disease"},{"id":"T43","span":{"begin":62,"end":70},"obj":"Disease"},{"id":"T44","span":{"begin":75,"end":78},"obj":"Disease"},{"id":"T46","span":{"begin":255,"end":257},"obj":"Disease"},{"id":"T47","span":{"begin":404,"end":414},"obj":"Disease"},{"id":"T48","span":{"begin":416,"end":427},"obj":"Disease"},{"id":"T49","span":{"begin":559,"end":567},"obj":"Disease"}],"attributes":[{"id":"A40","pred":"mondo_id","subj":"T40","obj":"http://purl.obolibrary.org/obo/MONDO_0021367"},{"id":"A41","pred":"mondo_id","subj":"T41","obj":"http://purl.obolibrary.org/obo/MONDO_0011996"},{"id":"A42","pred":"mondo_id","subj":"T42","obj":"http://purl.obolibrary.org/obo/MONDO_0004643"},{"id":"A43","pred":"mondo_id","subj":"T43","obj":"http://purl.obolibrary.org/obo/MONDO_0005059"},{"id":"A44","pred":"mondo_id","subj":"T44","obj":"http://purl.obolibrary.org/obo/MONDO_0001014"},{"id":"A45","pred":"mondo_id","subj":"T44","obj":"http://purl.obolibrary.org/obo/MONDO_0011996"},{"id":"A46","pred":"mondo_id","subj":"T46","obj":"http://purl.obolibrary.org/obo/MONDO_0017319"},{"id":"A47","pred":"mondo_id","subj":"T47","obj":"http://purl.obolibrary.org/obo/MONDO_0003014"},{"id":"A48","pred":"mondo_id","subj":"T48","obj":"http://purl.obolibrary.org/obo/MONDO_0002258"},{"id":"A49","pred":"mondo_id","subj":"T49","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"}],"text":"A 65-year-old male with accelerated phase chronic myelogenous leukemia (AP-CML) presented to the emergency department with a 3-day history of febrile sensation (not measured by the patient) and progressive shortness of breath, mainly with exertion. Also, he had had a productive cough with a small amount of yellowish sputum and intermittent pleuritic chest pain for a few days. He denied any history of runny nose, sore throat, loss of smell or taste sense, night sweating, or weight loss. There was no history of contact with sick patients, especially with COVID-19, nor recent travel."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T24","span":{"begin":0,"end":1},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T25","span":{"begin":14,"end":18},"obj":"http://purl.obolibrary.org/obo/UBERON_0003101"},{"id":"T26","span":{"begin":14,"end":18},"obj":"http://www.ebi.ac.uk/efo/EFO_0000970"},{"id":"T27","span":{"begin":72,"end":74},"obj":"http://purl.obolibrary.org/obo/CLO_0001547"},{"id":"T28","span":{"begin":123,"end":126},"obj":"http://purl.obolibrary.org/obo/CLO_0001577"},{"id":"T29","span":{"begin":266,"end":267},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T30","span":{"begin":290,"end":291},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T31","span":{"begin":352,"end":357},"obj":"http://www.ebi.ac.uk/efo/EFO_0000965"},{"id":"T32","span":{"begin":367,"end":368},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T33","span":{"begin":410,"end":414},"obj":"http://www.ebi.ac.uk/efo/EFO_0000828"}],"text":"A 65-year-old male with accelerated phase chronic myelogenous leukemia (AP-CML) presented to the emergency department with a 3-day history of febrile sensation (not measured by the patient) and progressive shortness of breath, mainly with exertion. Also, he had had a productive cough with a small amount of yellowish sputum and intermittent pleuritic chest pain for a few days. He denied any history of runny nose, sore throat, loss of smell or taste sense, night sweating, or weight loss. There was no history of contact with sick patients, especially with COVID-19, nor recent travel."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T7","span":{"begin":14,"end":18},"obj":"Chemical"},{"id":"T8","span":{"begin":72,"end":74},"obj":"Chemical"}],"attributes":[{"id":"A7","pred":"chebi_id","subj":"T7","obj":"http://purl.obolibrary.org/obo/CHEBI_30780"},{"id":"A8","pred":"chebi_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CHEBI_28971"},{"id":"A9","pred":"chebi_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CHEBI_73393"},{"id":"A10","pred":"chebi_id","subj":"T8","obj":"http://purl.obolibrary.org/obo/CHEBI_81686"}],"text":"A 65-year-old male with accelerated phase chronic myelogenous leukemia (AP-CML) presented to the emergency department with a 3-day history of febrile sensation (not measured by the patient) and progressive shortness of breath, mainly with exertion. Also, he had had a productive cough with a small amount of yellowish sputum and intermittent pleuritic chest pain for a few days. He denied any history of runny nose, sore throat, loss of smell or taste sense, night sweating, or weight loss. There was no history of contact with sick patients, especially with COVID-19, nor recent travel."}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T1","span":{"begin":446,"end":451},"obj":"http://purl.obolibrary.org/obo/GO_0050909"}],"text":"A 65-year-old male with accelerated phase chronic myelogenous leukemia (AP-CML) presented to the emergency department with a 3-day history of febrile sensation (not measured by the patient) and progressive shortness of breath, mainly with exertion. Also, he had had a productive cough with a small amount of yellowish sputum and intermittent pleuritic chest pain for a few days. He denied any history of runny nose, sore throat, loss of smell or taste sense, night sweating, or weight loss. There was no history of contact with sick patients, especially with COVID-19, nor recent travel."}

{"project":"LitCovid-sentences","denotations":[{"id":"T17","span":{"begin":0,"end":248},"obj":"Sentence"},{"id":"T18","span":{"begin":249,"end":378},"obj":"Sentence"},{"id":"T19","span":{"begin":379,"end":490},"obj":"Sentence"},{"id":"T20","span":{"begin":491,"end":587},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"A 65-year-old male with accelerated phase chronic myelogenous leukemia (AP-CML) presented to the emergency department with a 3-day history of febrile sensation (not measured by the patient) and progressive shortness of breath, mainly with exertion. Also, he had had a productive cough with a small amount of yellowish sputum and intermittent pleuritic chest pain for a few days. He denied any history of runny nose, sore throat, loss of smell or taste sense, night sweating, or weight loss. There was no history of contact with sick patients, especially with COVID-19, nor recent travel."}

{"project":"LitCovid-PubTator","denotations":[{"id":"92","span":{"begin":181,"end":188},"obj":"Species"},{"id":"93","span":{"begin":533,"end":541},"obj":"Species"},{"id":"94","span":{"begin":50,"end":70},"obj":"Disease"},{"id":"95","span":{"begin":75,"end":78},"obj":"Disease"},{"id":"96","span":{"begin":206,"end":225},"obj":"Disease"},{"id":"97","span":{"begin":279,"end":284},"obj":"Disease"},{"id":"98","span":{"begin":342,"end":362},"obj":"Disease"},{"id":"99","span":{"begin":416,"end":427},"obj":"Disease"},{"id":"100","span":{"begin":478,"end":489},"obj":"Disease"},{"id":"101","span":{"begin":559,"end":567},"obj":"Disease"}],"attributes":[{"id":"A92","pred":"tao:has_database_id","subj":"92","obj":"Tax:9606"},{"id":"A93","pred":"tao:has_database_id","subj":"93","obj":"Tax:9606"},{"id":"A94","pred":"tao:has_database_id","subj":"94","obj":"MESH:D007951"},{"id":"A95","pred":"tao:has_database_id","subj":"95","obj":"MESH:D015464"},{"id":"A96","pred":"tao:has_database_id","subj":"96","obj":"MESH:D004417"},{"id":"A97","pred":"tao:has_database_id","subj":"97","obj":"MESH:D003371"},{"id":"A98","pred":"tao:has_database_id","subj":"98","obj":"MESH:D002637"},{"id":"A99","pred":"tao:has_database_id","subj":"99","obj":"MESH:D010608"},{"id":"A100","pred":"tao:has_database_id","subj":"100","obj":"MESH:D015431"},{"id":"A101","pred":"tao:has_database_id","subj":"101","obj":"MESH:C000657245"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"A 65-year-old male with accelerated phase chronic myelogenous leukemia (AP-CML) presented to the emergency department with a 3-day history of febrile sensation (not measured by the patient) and progressive shortness of breath, mainly with exertion. Also, he had had a productive cough with a small amount of yellowish sputum and intermittent pleuritic chest pain for a few days. He denied any history of runny nose, sore throat, loss of smell or taste sense, night sweating, or weight loss. There was no history of contact with sick patients, especially with COVID-19, nor recent travel."}