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PMC:7272971 / 7922-14415 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
211 11-24 Species denotes coronaviruses Tax:11118
240 107-138 Gene denotes angiotensin converting enzyme‐2 Gene:59272
241 140-144 Gene denotes ACE2 Gene:59272
242 255-262 Gene denotes TMPRSS2 Gene:7113
243 279-284 Gene denotes Furin Gene:5045
244 361-366 Gene denotes spike Gene:43740568
245 396-400 Gene denotes ACE2 Gene:59272
246 456-460 Gene denotes ACE2 Gene:59272
247 554-558 Gene denotes ACE2 Gene:59272
248 672-677 Gene denotes spike Gene:43740568
249 714-719 Gene denotes CD209 Gene:30835
250 783-789 Gene denotes ICAM‐3 Gene:3385
251 814-821 Gene denotes DC‐SIGN Gene:30835
252 827-833 Gene denotes CD209L Gene:10332
253 835-841 Gene denotes L‐SIGN Gene:10332
254 904-909 Gene denotes DPP‐4 Gene:1803
255 951-956 Gene denotes CD66e Gene:1048
256 958-965 Gene denotes CEACAM5 Gene:1048
257 91-101 Species denotes SARS‐CoV‐2 Tax:2697049
258 165-170 Species denotes human Tax:9606
259 229-238 Species denotes mammalian Tax:9606
260 408-416 Species denotes SARS‐CoV Tax:694009
261 540-550 Species denotes SARS‐CoV‐2 Tax:2697049
262 591-599 Species denotes SARS‐CoV Tax:694009
263 691-699 Species denotes SARS‐CoV Tax:694009
264 854-862 Species denotes MERS‐CoV Tax:1335626
265 239-245 Chemical denotes serine MESH:D012694
266 307-323 Chemical denotes basic Amino acid MESH:D024361
267 210-219 Disease denotes infection MESH:D007239
288 1107-1116 Gene denotes Neu5,9Ac2
289 1137-1141 Gene denotes ACE2 Gene:59272
290 1271-1275 Gene denotes ACE2 Gene:59272
291 1521-1537 Gene denotes aminopeptidase N Gene:290
292 1542-1547 Gene denotes CD209 Gene:30835
293 995-1000 Species denotes human Tax:9606
294 1001-1014 Species denotes coronaviruses Tax:11118
295 1016-1025 Species denotes hCoV‐229E Tax:11137
296 1178-1186 Species denotes SARS‐CoV Tax:694009
297 1393-1406 Species denotes coronaviruses Tax:11118
298 1474-1509 Species denotes Feline infectious peritonitis virus Tax:11135
299 1579-1597 Species denotes Bovine coronavirus Tax:11128
300 1066-1070 Species denotes HKU1 Tax:290028
301 1127-1131 Species denotes NL63 Tax:277944
302 1169-1173 Species denotes NL63 Tax:277944
303 1094-1105 Chemical denotes sialic acid MESH:D019158
304 1213-1228 Chemical denotes heparan sulfate MESH:D006497
305 1416-1431 Chemical denotes heparan sulfate MESH:D006497
306 1622-1633 Chemical denotes sialic acid MESH:D019158
307 1347-1356 Disease denotes infection MESH:D007239
311 1703-1713 Species denotes SARS‐CoV‐2 Tax:2697049
312 1715-1723 Species denotes SARS‐CoV Tax:694009
313 1728-1736 Species denotes MERS‐CoV Tax:1335626
329 2006-2010 Gene denotes ACE2 Gene:59272
330 2155-2162 Gene denotes TMPRSS2 Gene:7113
331 2171-2176 Gene denotes spike Gene:43740568
332 2200-2204 Gene denotes ACE2 Gene:59272
333 2234-2239 Gene denotes CD209 Gene:30835
334 1899-1912 Species denotes Coronaviruses Tax:11118
335 1932-1937 Species denotes human Tax:9606
336 1999-2004 Species denotes CoV‐2 Tax:2697049
337 2329-2337 Species denotes MERS‐CoV Tax:1335626
338 1938-1957 Disease denotes CoV disease Ocular MESH:C000657245
339 2049-2058 Disease denotes infection MESH:D007239
340 2104-2122 Disease denotes corneal epithelium MESH:D003316
341 2273-2290 Disease denotes corneal dendritic MESH:D003316
342 2382-2391 Disease denotes infection MESH:D007239
343 2499-2520 Disease denotes palpebral conjunctiva MESH:C563620
347 1828-1838 Species denotes SARS‐CoV‐2 Tax:2697049
348 1840-1848 Species denotes SARS‐CoV Tax:694009
349 1853-1861 Species denotes MERS‐CoV Tax:1335626
374 2760-2764 Gene denotes ACE2 Gene:59272
375 3107-3111 Gene denotes ACE2 Gene:59272
376 3181-3185 Gene denotes ACE2 Gene:59272
377 3241-3245 Gene denotes ACE2 Gene:59272
378 3485-3489 Gene denotes ACE2 Gene:103231639
379 3601-3605 Gene denotes ACE2 Gene:103231639
380 3838-3845 Gene denotes TMPRSS2 Gene:103219191
381 3849-3854 Gene denotes Furin Gene:103231185
382 3882-3887 Gene denotes spike Gene:43740568
383 4091-4098 Gene denotes TMPRSS2 Gene:103219191
384 4249-4256 Gene denotes TMPRSS2 Gene:103219191
385 4261-4265 Gene denotes ACE2 Gene:103231639
386 4308-4312 Gene denotes ACE2 Gene:103231639
387 4316-4323 Gene denotes TMPRSS2 Gene:103219191
388 2972-2980 Species denotes SARS‐CoV Tax:694009
389 3822-3828 Chemical denotes serine MESH:D012694
390 2783-2790 Disease denotes corneal MESH:D003316
391 3042-3049 Disease denotes corneal MESH:D003316
392 3276-3283 Disease denotes corneal MESH:D003316
393 3493-3511 Disease denotes corneal epithelium MESH:D003316
394 3613-3620 Disease denotes corneal MESH:D003316
395 3934-3941 Disease denotes corneal MESH:D003316
396 3355-3357 CellLine denotes E6 CVCL:4582
397 3413-3415 CellLine denotes E6 CVCL:4582
418 4541-4546 Gene denotes CD209 Gene:30835
419 4833-4838 Gene denotes CD66e Gene:1048
420 4988-4993 Gene denotes CD66e Gene:1048
421 5217-5222 Gene denotes mucin Gene:100508689
422 4563-4568 Species denotes human Tax:9606
423 4800-4808 Species denotes patients Tax:9606
424 4867-4875 Species denotes patients Tax:9606
425 5108-5113 Species denotes human Tax:9606
426 5184-5189 Species denotes human Tax:9606
427 5203-5208 Species denotes human Tax:9606
428 5262-5267 Species denotes human Tax:9606
429 5154-5165 Chemical denotes sialic acid MESH:D019158
430 5228-5243 Chemical denotes Heparan sulfate MESH:D006497
431 4569-4586 Disease denotes corneal dendritic MESH:D003316
432 4778-4799 Disease denotes vernal conjunctivitis MESH:D003233
433 4881-4889 Disease denotes trachoma MESH:D014141
434 4923-4950 Disease denotes upper palpebral conjunctiva MESH:C563620
435 5060-5067 Disease denotes corneal MESH:D003316
436 5114-5121 Disease denotes corneal MESH:D003316
437 5209-5216 Disease denotes corneal MESH:D003316
451 5718-5722 Gene denotes ACE2 Gene:59272
452 5748-5755 Gene denotes TMPRSS2 Gene:7113
453 5759-5764 Gene denotes Furin Gene:5045
454 5801-5806 Gene denotes spike Gene:43740568
455 5840-5844 Gene denotes ACE2 Gene:59272
456 5680-5690 Species denotes SARS‐CoV‐2 Tax:2697049
457 5692-5695 Species denotes SAR Tax:2698737
458 5696-5699 Species denotes CoV Tax:11118
459 5818-5828 Species denotes SARS‐CoV‐2 Tax:2697049
460 5704-5708 Species denotes NL63 Tax:277944
461 5378-5393 Chemical denotes heparan sulfate MESH:D006497
462 5617-5632 Chemical denotes heparan sulfate MESH:D006497
463 5478-5499 Disease denotes coronavirus infection MESH:D018352
473 5940-5945 Gene denotes CD209 Gene:30835
474 5959-5964 Gene denotes CD66e Gene:1048
475 5925-5938 Species denotes coronaviruses Tax:11118
476 6412-6425 Species denotes coronaviruses Tax:11118
477 5885-5896 Chemical denotes sialic acid MESH:D019158
478 6189-6200 Chemical denotes sialic acid MESH:D019158
479 6349-6360 Chemical denotes sialic acid MESH:D019158
480 6062-6069 Disease denotes corneal MESH:D003316
481 6483-6492 Disease denotes infection MESH:D007239

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T35 33-38 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T36 76-90 Body_part denotes surface tissue http://purl.org/sig/ont/fma/fma67640
T37 84-90 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T38 171-176 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T39 239-245 Body_part denotes serine http://purl.org/sig/ont/fma/fma82764
T40 313-323 Body_part denotes Amino acid http://purl.org/sig/ont/fma/fma82739
T41 367-374 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T42 435-447 Body_part denotes cell‐surface http://purl.org/sig/ont/fma/fma67653
T43 435-439 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T44 448-455 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T45 514-519 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T46 630-634 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T47 645-655 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T48 678-685 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T49 721-735 Body_part denotes dendritic cell http://purl.org/sig/ont/fma/fma273565
T50 731-735 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T51 783-787 Body_part denotes ICAM http://purl.org/sig/ont/fma/fma67857
T52 804-812 Body_part denotes integrin http://purl.org/sig/ont/fma/fma67222
T53 876-888 Body_part denotes cell‐surface http://purl.org/sig/ont/fma/fma67653
T54 876-880 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T55 1046-1051 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T56 1158-1163 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T57 1203-1208 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T58 1213-1242 Body_part denotes heparan sulfate proteoglycans http://purl.org/sig/ont/fma/fma82834
T59 1213-1228 Body_part denotes heparan sulfate http://purl.org/sig/ont/fma/fma63023
T60 1416-1431 Body_part denotes heparan sulfate http://purl.org/sig/ont/fma/fma63023
T61 1435-1448 Body_part denotes cell surfaces http://purl.org/sig/ont/fma/fma67653
T62 1435-1439 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T63 1568-1573 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T64 1646-1651 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T65 1747-1763 Body_part denotes surface and lung http://purl.org/sig/ont/fma/fma17530
T66 1759-1763 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T67 1764-1769 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T68 1882-1898 Body_part denotes surface and lung http://purl.org/sig/ont/fma/fma17530
T69 1894-1898 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T70 1967-1971 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T71 1980-1984 Body_part denotes Lung http://purl.org/sig/ont/fma/fma7195
T72 2017-2021 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T73 2076-2086 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T74 2091-2102 Body_part denotes fibroblasts http://purl.org/sig/ont/fma/fma63877
T75 2104-2122 Body_part denotes corneal epithelium http://purl.org/sig/ont/fma/fma58263
T76 2112-2122 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T77 2138-2147 Body_part denotes epithelia http://purl.org/sig/ont/fma/fma9639
T78 2177-2184 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T79 2219-2229 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T80 2241-2245 Body_part denotes Cell http://purl.org/sig/ont/fma/fma68646
T81 2249-2253 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T82 2281-2296 Body_part denotes dendritic cells http://purl.org/sig/ont/fma/fma273565
T83 2291-2296 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T84 2313-2324 Body_part denotes macrophages http://purl.org/sig/ont/fma/fma63261
T85 2350-2354 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T86 2420-2431 Body_part denotes endothelium http://purl.org/sig/ont/fma/fma63916
T87 2440-2444 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T88 2445-2454 Body_part denotes epithelia http://purl.org/sig/ont/fma/fma9639
T89 2499-2520 Body_part denotes palpebral conjunctiva http://purl.org/sig/ont/fma/fma59025
T90 2543-2562 Body_part denotes alveolar epithelium http://purl.org/sig/ont/fma/fma63915
T91 2552-2562 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T92 2676-2682 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T93 2725-2731 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T94 2751-2755 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T95 2795-2824 Body_part denotes conjunctival epithelial cells http://purl.org/sig/ont/fma/fma70552
T96 2819-2824 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T97 2894-2901 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T98 2924-2929 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T99 2956-2963 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T100 3021-3031 Body_part denotes fibroblast http://purl.org/sig/ont/fma/fma63877
T101 3032-3037 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T102 3042-3066 Body_part denotes corneal epithelial cells http://purl.org/sig/ont/fma/fma70551
T103 3061-3066 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T104 3168-3180 Body_part denotes cell‐surface http://purl.org/sig/ont/fma/fma67653
T105 3168-3172 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T106 3284-3289 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T107 3294-3301 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T108 3326-3331 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T109 3333-3337 Body_part denotes lung http://purl.org/sig/ont/fma/fma7195
T110 3338-3345 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T111 3358-3363 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T112 3416-3421 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T113 3476-3480 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T114 3493-3511 Body_part denotes corneal epithelium http://purl.org/sig/ont/fma/fma58263
T115 3501-3511 Body_part denotes epithelium http://purl.org/sig/ont/fma/fma9639
T116 3541-3545 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T117 3555-3566 Body_part denotes conjunctiva http://purl.org/sig/ont/fma/fma59011
T118 3632-3636 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T119 3717-3732 Body_part denotes small intestine http://purl.org/sig/ont/fma/fma7200
T120 3733-3747 Body_part denotes terminal ileum http://purl.org/sig/ont/fma/fma14966
T121 3771-3776 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T122 3777-3791 Body_part denotes left ventricle http://purl.org/sig/ont/fma/fma7101
T123 3822-3828 Body_part denotes serine http://purl.org/sig/ont/fma/fma82764
T124 3888-3895 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T125 3922-3927 Body_part denotes tears http://purl.org/sig/ont/fma/fma59756
T126 3958-3963 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T127 4014-4019 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T128 4082-4086 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T129 4118-4123 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T130 4139-4150 Body_part denotes conjunctiva http://purl.org/sig/ont/fma/fma59011
T131 4190-4195 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T132 4299-4303 Body_part denotes mRNA http://purl.org/sig/ont/fma/fma67122
T133 4338-4344 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T134 4459-4466 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T135 4476-4488 Body_part denotes nasal cavity http://purl.org/sig/ont/fma/fma54378
T136 4490-4505 Body_part denotes lung parenchyma http://purl.org/sig/ont/fma/fma27360
T137 4507-4512 Body_part denotes ileum http://purl.org/sig/ont/fma/fma7208
T138 4514-4519 Body_part denotes colon http://purl.org/sig/ont/fma/fma14543
T139 4521-4526 Body_part denotes heart http://purl.org/sig/ont/fma/fma7088
T140 4577-4592 Body_part denotes dendritic cells http://purl.org/sig/ont/fma/fma273565
T141 4587-4592 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T142 4643-4649 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T143 4720-4737 Body_part denotes endothelial cells http://purl.org/sig/ont/fma/fma66772
T144 4732-4737 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T145 4754-4760 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T146 4846-4857 Body_part denotes conjunctiva http://purl.org/sig/ont/fma/fma59011
T147 4898-4902 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T148 4923-4950 Body_part denotes upper palpebral conjunctiva http://purl.org/sig/ont/fma/fma59026
T149 4997-5003 Body_part denotes cornea http://purl.org/sig/ont/fma/fma58238
T150 5007-5012 Body_part denotes tears http://purl.org/sig/ont/fma/fma59756
T151 5060-5084 Body_part denotes corneal epithelial cells http://purl.org/sig/ont/fma/fma70551
T152 5079-5084 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T153 5114-5133 Body_part denotes corneal keratocytes http://purl.org/sig/ont/fma/fma0326141
T154 5190-5195 Body_part denotes tears http://purl.org/sig/ont/fma/fma59756
T155 5228-5243 Body_part denotes Heparan sulfate http://purl.org/sig/ont/fma/fma63023
T156 5228-5235 Body_part denotes Heparan http://purl.org/sig/ont/fma/fma67110
T157 5268-5274 Body_part denotes cornea http://purl.org/sig/ont/fma/fma58238
T158 5279-5290 Body_part denotes conjunctiva http://purl.org/sig/ont/fma/fma59011
T159 5291-5296 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T160 5378-5393 Body_part denotes heparan sulfate http://purl.org/sig/ont/fma/fma63023
T161 5568-5573 Body_part denotes tears http://purl.org/sig/ont/fma/fma59756
T162 5617-5632 Body_part denotes heparan sulfate http://purl.org/sig/ont/fma/fma63023
T163 5765-5773 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T164 5807-5814 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T165 5993-6004 Body_part denotes fibroblasts http://purl.org/sig/ont/fma/fma63877
T166 6009-6024 Body_part denotes dendritic cells http://purl.org/sig/ont/fma/fma273565
T167 6019-6024 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T168 6037-6043 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T169 6074-6103 Body_part denotes conjunctival epithelial cells http://purl.org/sig/ont/fma/fma70552
T170 6098-6103 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T171 6141-6148 Body_part denotes tissues http://purl.org/sig/ont/fma/fma9637
T172 6217-6225 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T173 6229-6234 Body_part denotes tears http://purl.org/sig/ont/fma/fma59756
T174 6318-6322 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T175 6457-6470 Body_part denotes surface cells http://purl.org/sig/ont/fma/fma67653
T176 6465-6470 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T9 84-90 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T10 1759-1763 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T11 1894-1898 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T12 1980-1984 Body_part denotes Lung http://purl.obolibrary.org/obo/UBERON_0002048
T13 2076-2086 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T14 2104-2122 Body_part denotes corneal epithelium http://purl.obolibrary.org/obo/UBERON_0001772
T15 2112-2122 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T16 2138-2147 Body_part denotes epithelia http://purl.obolibrary.org/obo/UBERON_0000483
T17 2219-2229 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T18 2420-2431 Body_part denotes endothelium http://purl.obolibrary.org/obo/UBERON_0001986
T19 2440-2444 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T20 2445-2454 Body_part denotes epithelia http://purl.obolibrary.org/obo/UBERON_0000483
T21 2499-2520 Body_part denotes palpebral conjunctiva http://purl.obolibrary.org/obo/UBERON_0001812
T22 2509-2520 Body_part denotes conjunctiva http://purl.obolibrary.org/obo/UBERON_0001811
T23 2552-2562 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T24 2676-2682 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T25 2725-2731 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T26 3326-3331 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T27 3333-3337 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T28 3493-3511 Body_part denotes corneal epithelium http://purl.obolibrary.org/obo/UBERON_0001772
T29 3501-3511 Body_part denotes epithelium http://purl.obolibrary.org/obo/UBERON_0000483
T30 3555-3566 Body_part denotes conjunctiva http://purl.obolibrary.org/obo/UBERON_0001811
T31 3717-3732 Body_part denotes small intestine http://purl.obolibrary.org/obo/UBERON_0002108
T32 3723-3732 Body_part denotes intestine http://purl.obolibrary.org/obo/UBERON_0000160
T33 3742-3747 Body_part denotes ileum http://purl.obolibrary.org/obo/UBERON_0002116
T34 3771-3791 Body_part denotes heart left ventricle http://purl.obolibrary.org/obo/UBERON_0002084
T35 3771-3776 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T36 4139-4150 Body_part denotes conjunctiva http://purl.obolibrary.org/obo/UBERON_0001811
T37 4338-4344 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T38 4476-4488 Body_part denotes nasal cavity http://purl.obolibrary.org/obo/UBERON_0001707
T39 4490-4505 Body_part denotes lung parenchyma http://purl.obolibrary.org/obo/UBERON_0008946
T40 4490-4494 Body_part denotes lung http://purl.obolibrary.org/obo/UBERON_0002048
T41 4495-4505 Body_part denotes parenchyma http://purl.obolibrary.org/obo/UBERON_0000353
T42 4507-4512 Body_part denotes ileum http://purl.obolibrary.org/obo/UBERON_0002116
T43 4514-4519 Body_part denotes colon http://purl.obolibrary.org/obo/UBERON_0001155
T44 4521-4526 Body_part denotes heart http://purl.obolibrary.org/obo/UBERON_0000948
T45 4643-4649 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T46 4754-4760 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T47 4846-4857 Body_part denotes conjunctiva http://purl.obolibrary.org/obo/UBERON_0001811
T48 4929-4950 Body_part denotes palpebral conjunctiva http://purl.obolibrary.org/obo/UBERON_0001812
T49 4939-4950 Body_part denotes conjunctiva http://purl.obolibrary.org/obo/UBERON_0001811
T50 4997-5003 Body_part denotes cornea http://purl.obolibrary.org/obo/UBERON_0000964
T51 5268-5274 Body_part denotes cornea http://purl.obolibrary.org/obo/UBERON_0000964
T52 5279-5290 Body_part denotes conjunctiva http://purl.obolibrary.org/obo/UBERON_0001811
T53 6037-6043 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T7 1492-1503 Phenotype denotes peritonitis http://purl.obolibrary.org/obo/HP_0002586
T8 4785-4799 Phenotype denotes conjunctivitis http://purl.obolibrary.org/obo/HP_0000509

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T45 91-95 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T46 210-219 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T47 408-412 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T48 540-544 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T49 591-595 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T50 691-695 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T51 1178-1182 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T52 1347-1356 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T53 1474-1503 Disease denotes Feline infectious peritonitis http://purl.obolibrary.org/obo/MONDO_0025491
T54 1481-1491 Disease denotes infectious http://purl.obolibrary.org/obo/MONDO_0005550
T55 1492-1503 Disease denotes peritonitis http://purl.obolibrary.org/obo/MONDO_0004522
T56 1703-1707 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T57 1715-1719 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T58 1828-1832 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T59 1840-1844 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T60 1985-1989 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T61 1994-1998 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T62 2049-2058 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T63 2382-2391 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T64 2972-2976 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T65 4778-4799 Disease denotes vernal conjunctivitis http://purl.obolibrary.org/obo/MONDO_0002313
T66 4785-4799 Disease denotes conjunctivitis http://purl.obolibrary.org/obo/MONDO_0003799
T67 4881-4889 Disease denotes trachoma http://purl.obolibrary.org/obo/MONDO_0001249
T68 5490-5499 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550
T69 5680-5684 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T70 5818-5822 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T71 6483-6492 Disease denotes infection http://purl.obolibrary.org/obo/MONDO_0005550

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T71 33-38 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T72 165-176 http://purl.obolibrary.org/obo/CLO_0053065 denotes human cells
T73 405-407 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T74 435-439 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T75 498-503 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T76 514-519 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T77 630-634 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T78 721-735 http://purl.obolibrary.org/obo/CL_0000451 denotes dendritic cell
T79 847-849 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T80 876-880 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T81 995-1000 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T82 1046-1051 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T83 1158-1163 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T84 1165-1167 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T85 1203-1208 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T86 1213-1242 http://purl.obolibrary.org/obo/PR_000001307 denotes heparan sulfate proteoglycans
T87 1295-1297 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T88 1375-1382 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T89 1435-1439 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T90 1504-1509 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T91 1568-1573 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T92 1646-1651 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T93 1673-1674 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T94 1759-1763 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T95 1759-1763 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T96 1764-1769 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T97 1782-1784 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T98 1786-1788 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T99 1790-1792 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T100 1894-1898 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T101 1894-1898 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T102 1932-1937 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T103 1967-1977 http://purl.obolibrary.org/obo/CL_0000000 denotes cell types
T104 1980-1984 http://purl.obolibrary.org/obo/UBERON_0002048 denotes Lung
T105 1980-1984 http://www.ebi.ac.uk/efo/EFO_0000934 denotes Lung
T106 2017-2021 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T107 2076-2086 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T108 2091-2102 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblasts
T109 2112-2122 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T110 2131-2137 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airway
T111 2212-2218 http://purl.obolibrary.org/obo/UBERON_0001005 denotes airway
T112 2219-2229 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T113 2231-2233 http://purl.obolibrary.org/obo/CLO_0001302 denotes 34
T114 2241-2245 http://purl.obolibrary.org/obo/GO_0005623 denotes Cell
T115 2249-2253 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T116 2281-2296 http://purl.obolibrary.org/obo/CL_0000451 denotes dendritic cells
T117 2298-2300 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T118 2326-2328 http://purl.obolibrary.org/obo/CLO_0001313 denotes 36
T119 2350-2354 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T120 2420-2431 http://purl.obolibrary.org/obo/UBERON_0001986 denotes endothelium
T121 2440-2444 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T122 2440-2444 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T123 2509-2520 http://purl.obolibrary.org/obo/UBERON_0001811 denotes conjunctiva
T124 2509-2520 http://www.ebi.ac.uk/efo/EFO_0000374 denotes conjunctiva
T125 2552-2562 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T126 2583-2586 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T127 2751-2755 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T128 2765-2768 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T129 2808-2818 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T130 2819-2824 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T131 2851-2854 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T132 2924-2929 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T133 3006-3016 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T134 3021-3031 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblast
T135 3032-3037 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T136 3050-3060 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T137 3061-3066 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T138 3168-3172 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T139 3284-3289 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T140 3326-3331 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T141 3326-3331 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T142 3326-3331 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T143 3326-3331 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T144 3333-3337 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T145 3333-3337 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T146 3350-3363 http://purl.obolibrary.org/obo/CLO_0051719 denotes Vero E6 cells
T147 3408-3421 http://purl.obolibrary.org/obo/CLO_0051719 denotes Vero E6 cells
T148 3501-3511 http://purl.obolibrary.org/obo/UBERON_0000483 denotes epithelium
T149 3555-3566 http://purl.obolibrary.org/obo/UBERON_0001811 denotes conjunctiva
T150 3555-3566 http://www.ebi.ac.uk/efo/EFO_0000374 denotes conjunctiva
T151 3568-3570 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T152 3621-3631 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T153 3690-3696 http://purl.obolibrary.org/obo/UBERON_0000473 denotes testes
T154 3717-3732 http://purl.obolibrary.org/obo/UBERON_0002108 denotes small intestine
T155 3742-3747 http://purl.obolibrary.org/obo/UBERON_0002116 denotes ileum
T156 3771-3776 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T157 3771-3776 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T158 3771-3776 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T159 3771-3776 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T160 3793-3795 http://purl.obolibrary.org/obo/CLO_0053794 denotes 41
T161 3958-3963 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T162 4014-4019 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T163 4082-4086 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T164 4118-4123 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T165 4139-4150 http://purl.obolibrary.org/obo/UBERON_0001811 denotes conjunctiva
T166 4139-4150 http://www.ebi.ac.uk/efo/EFO_0000374 denotes conjunctiva
T167 4190-4195 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T168 4235-4240 http://purl.obolibrary.org/obo/OGG_0000000002 denotes genes
T169 4482-4488 http://purl.obolibrary.org/obo/UBERON_0002553 denotes cavity
T170 4490-4494 http://purl.obolibrary.org/obo/UBERON_0002048 denotes lung
T171 4490-4494 http://www.ebi.ac.uk/efo/EFO_0000934 denotes lung
T172 4507-4512 http://purl.obolibrary.org/obo/UBERON_0002116 denotes ileum
T173 4514-4519 http://purl.obolibrary.org/obo/UBERON_0001155 denotes colon
T174 4521-4526 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T175 4521-4526 http://purl.obolibrary.org/obo/UBERON_0007100 denotes heart
T176 4521-4526 http://purl.obolibrary.org/obo/UBERON_0015228 denotes heart
T177 4521-4526 http://www.ebi.ac.uk/efo/EFO_0000815 denotes heart
T178 4563-4568 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T179 4577-4592 http://purl.obolibrary.org/obo/CL_0000451 denotes dendritic cells
T180 4594-4596 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T181 4655-4658 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T182 4720-4737 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cells
T183 4846-4857 http://purl.obolibrary.org/obo/UBERON_0001811 denotes conjunctiva
T184 4846-4857 http://www.ebi.ac.uk/efo/EFO_0000374 denotes conjunctiva
T185 4898-4902 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T186 4939-4950 http://purl.obolibrary.org/obo/UBERON_0001811 denotes conjunctiva
T187 4939-4950 http://www.ebi.ac.uk/efo/EFO_0000374 denotes conjunctiva
T188 4997-5003 http://purl.obolibrary.org/obo/UBERON_0000964 denotes cornea
T189 4997-5003 http://www.ebi.ac.uk/efo/EFO_0000377 denotes cornea
T190 5019-5022 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T191 5068-5078 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T192 5079-5084 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T193 5090-5093 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T194 5108-5113 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T195 5166-5169 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T196 5184-5189 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T197 5203-5208 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T198 5244-5247 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T199 5262-5267 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T200 5268-5274 http://purl.obolibrary.org/obo/UBERON_0000964 denotes cornea
T201 5268-5274 http://www.ebi.ac.uk/efo/EFO_0000377 denotes cornea
T202 5279-5290 http://purl.obolibrary.org/obo/UBERON_0001811 denotes conjunctiva
T203 5279-5290 http://www.ebi.ac.uk/efo/EFO_0000374 denotes conjunctiva
T204 5291-5296 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T205 5297-5299 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45
T206 5993-6004 http://purl.obolibrary.org/obo/CL_0000057 denotes fibroblasts
T207 6009-6024 http://purl.obolibrary.org/obo/CL_0000451 denotes dendritic cells
T208 6087-6097 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T209 6098-6103 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T210 6246-6247 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T211 6279-6286 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T212 6318-6322 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T213 6465-6470 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T16 107-118 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T17 239-245 Chemical denotes serine http://purl.obolibrary.org/obo/CHEBI_17822
T18 313-323 Chemical denotes Amino acid http://purl.obolibrary.org/obo/CHEBI_33704
T19 319-323 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T20 367-374 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T21 448-455 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T22 645-655 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T23 645-650 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T24 651-655 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T25 678-685 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T26 773-781 Chemical denotes molecule http://purl.obolibrary.org/obo/CHEBI_25367
T27 889-897 Chemical denotes molecule http://purl.obolibrary.org/obo/CHEBI_25367
T28 904-907 Chemical denotes DPP http://purl.obolibrary.org/obo/CHEBI_34680|http://purl.obolibrary.org/obo/CHEBI_60069
T30 942-950 Chemical denotes cofactor http://purl.obolibrary.org/obo/CHEBI_23357
T31 1094-1105 Chemical denotes sialic acid http://purl.obolibrary.org/obo/CHEBI_26667
T32 1101-1105 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T33 1213-1228 Chemical denotes heparan sulfate http://purl.obolibrary.org/obo/CHEBI_28815
T34 1213-1220 Chemical denotes heparan http://purl.obolibrary.org/obo/CHEBI_24500
T35 1221-1228 Chemical denotes sulfate http://purl.obolibrary.org/obo/CHEBI_16189
T36 1229-1242 Chemical denotes proteoglycans http://purl.obolibrary.org/obo/CHEBI_37396
T37 1416-1431 Chemical denotes heparan sulfate http://purl.obolibrary.org/obo/CHEBI_28815
T38 1416-1423 Chemical denotes heparan http://purl.obolibrary.org/obo/CHEBI_24500
T39 1424-1431 Chemical denotes sulfate http://purl.obolibrary.org/obo/CHEBI_16189
T40 1622-1633 Chemical denotes sialic acid http://purl.obolibrary.org/obo/CHEBI_26667
T41 1629-1633 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T42 2177-2184 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T43 2481-2483 Chemical denotes Co http://purl.obolibrary.org/obo/CHEBI_27638
T44 2894-2901 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T45 2956-2963 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T46 3822-3828 Chemical denotes serine http://purl.obolibrary.org/obo/CHEBI_17822
T47 3888-3895 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T48 5154-5165 Chemical denotes sialic acid http://purl.obolibrary.org/obo/CHEBI_26667
T49 5161-5165 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T50 5228-5243 Chemical denotes Heparan sulfate http://purl.obolibrary.org/obo/CHEBI_28815
T51 5236-5243 Chemical denotes sulfate http://purl.obolibrary.org/obo/CHEBI_16189
T52 5378-5393 Chemical denotes heparan sulfate http://purl.obolibrary.org/obo/CHEBI_28815
T53 5378-5385 Chemical denotes heparan http://purl.obolibrary.org/obo/CHEBI_24500
T54 5386-5393 Chemical denotes sulfate http://purl.obolibrary.org/obo/CHEBI_16189
T55 5617-5632 Chemical denotes heparan sulfate http://purl.obolibrary.org/obo/CHEBI_28815
T56 5617-5624 Chemical denotes heparan http://purl.obolibrary.org/obo/CHEBI_24500
T57 5625-5632 Chemical denotes sulfate http://purl.obolibrary.org/obo/CHEBI_16189
T58 5765-5773 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T59 5807-5814 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T60 5885-5896 Chemical denotes sialic acid http://purl.obolibrary.org/obo/CHEBI_26667
T61 5892-5896 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T62 6189-6200 Chemical denotes sialic acid http://purl.obolibrary.org/obo/CHEBI_26667
T63 6196-6200 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T64 6217-6225 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T65 6349-6360 Chemical denotes sialic acid http://purl.obolibrary.org/obo/CHEBI_26667
T66 6356-6360 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T3 4898-4913 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T1 1213-1228 GlycoEpitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T2 1416-1431 GlycoEpitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T3 5228-5243 GlycoEpitope denotes Heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T4 5378-5393 GlycoEpitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086
T5 5617-5632 GlycoEpitope denotes heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T54 0-90 Sentence denotes Binding of coronaviruses to host cells, and presence of receptors in ocular surface tissue
T55 91-220 Sentence denotes SARS‐CoV‐2 uses angiotensin converting enzyme‐2 (ACE2) as its receptor on human cells, and binding to this facilitates infection.
T56 221-520 Sentence denotes 16 The mammalian serine protease TMPRSS2 or the protease Furin (also known as Paired basic Amino acid Cleaving Enzyme) appear to prime the spike protein for interaction with ACE2.17, 18 SARS‐CoV also binds to the cell‐surface protein ACE2 and this binding is required for the virus to infect cells.
T57 521-686 Sentence denotes 19 The binding of SARS‐CoV‐2 to ACE2 is enhanced compared to that of SARS‐CoV due to several changes in the gene and hence amino acid sequence of the spike protein.
T58 687-967 Sentence denotes 20 SARS‐CoV also binds to CD209 (dendritic cell [DC]‐specific intercellular adhesion molecule [ICAM‐3] grabbing non‐integrin; DC‐SIGN) and CD209L (L‐SIGN).21, 22, 23 MERS‐CoV binds to the cell‐surface molecule CD26 (DPP‐4) and this is facilitated by the cofactor CD66e (CEACAM5).
T59 968-970 Sentence denotes 24
T60 971-1164 Sentence denotes For the less pathogenic human coronaviruses, hCoV‐229E uses CD13 to infect cells, 25 OC43 and HKU1 bind to 9‐O‐acetylated sialic acid (Neu5,9Ac2), 26 and NL63 uses ACE2 to bind to host cells.
T61 1165-1357 Sentence denotes 27 NL63 and SARS‐CoV first anchor to cells via heparan sulfate proteoglycans before interacting with the ACE2 entry receptor,19, 27, 28 but this binding alone is not sufficient for infection.
T62 1358-1469 Sentence denotes 19 In fact many viruses, not just coronaviruses, utilise heparan sulfate on cell surfaces for initial binding.
T63 1470-1574 Sentence denotes 29 Feline infectious peritonitis virus uses CD13 (aminopeptidase N) or CD209 to bind to its host cells.
T64 1575-1652 Sentence denotes 15 Bovine coronavirus binds to 9‐O‐acetylated sialic acid on its host cells.
T65 1653-1655 Sentence denotes 30
T66 1656-1804 Sentence denotes Table 1 presents a comparison of receptors for SARS‐CoV‐2, SARS‐CoV and MERS‐CoV on ocular surface and lung cells.31, 32, 33, 34, 35, 36, 37, 38, 39
T67 1805-1898 Sentence denotes Table 1 Comparison of SARS‐CoV‐2, SARS‐CoV and MERS‐CoV receptors on ocular surface and lung
T68 1899-1984 Sentence denotes Coronaviruses Receptor Role in human CoV disease Ocular surface (cell types) Lung
T69 1985-1993 Sentence denotes SARS‐CoV
T70 1994-2154 Sentence denotes SARS‐CoV‐2 ACE2 Host cell receptor and essential for infection + (conjunctival epithelium and fibroblasts; corneal epithelium) 31 + (airway epithelia)32, 33
T71 2155-2233 Sentence denotes TMPRSS2 Primes spike protein for binding to ACE2 – + (airway epithelium) 34
T72 2234-2328 Sentence denotes CD209 Cell‐to‐cell viral transfer + (corneal dendritic cells) 35 + (alveola macrophages) 36
T73 2329-2473 Sentence denotes MERS‐CoV CD26 Host cell receptor and essential for infection +/− (conjunctival vascular endothelium) 37 + (lung epithelia and endothelia) 38
T74 2474-2566 Sentence denotes CD66e Co‐receptor +/− (palpebral conjunctiva) 39 + (bronchial and alveolar epithelium) 32
T75 2567-2732 Sentence denotes +: the receptor has been found, −: there are no reports of the receptor on the ocular surface, +/−: found in tissue but only on non‐virally‐mediated inflamed tissue.
T76 2733-2930 Sentence denotes Expression of the gene for ACE2 has been shown in corneal and conjunctival epithelial cells, and preliminary evidence has been presented for the presence of the protein associated with these cells.
T77 2931-3186 Sentence denotes 40 The isolated surface protein S240 of SARS‐CoV can bind to conjunctival epithelial and fibroblast cells and corneal epithelial cells, with this binding inhibited by soluble ACE2, indicating that the binding was being mediated through cell‐surface ACE2.
T78 3187-3422 Sentence denotes 31 However, the authors did note that ‘the amount of ACE2 expressed in conjunctival and corneal cells and tissues (was) less than that in heart, lung tissues and Vero E6 cells’, and was approximately 50 per cent that of Vero E6 cells.
T79 3423-3567 Sentence denotes 31 Another paper provided evidence of expression of mRNA for ACE2 in corneal epithelium with no evidence provided of mRNA from the conjunctiva.
T80 3568-3792 Sentence denotes 41 The normalised expression of ACE2 in the corneal epithelial mRNA was only 20‐28 units, compared to > 400 units in the testes, > 200 units in the small intestine terminal ileum and > 100 units in the heart left ventricle.
T81 3793-3964 Sentence denotes 41 The previously mentioned serine protease TMPRSS2 or Furin, which appear to prime the spike protein, had not been reported in tears or on corneal or conjunctival cells.
T82 3965-4266 Sentence denotes However, 15 per cent of superficial conjunctival cells have been shown to have “greater‐than‐zero expression” of the gene for TMPRSS2, three per cent of cells in superficial conjunctiva and one per cent of limbal superficial cells have “greater‐than‐zero expression” of genes of both TMPRSS2 and ACE2.
T83 4267-4537 Sentence denotes The mean level of expression of mRNA for ACE2 or TMPRSS2 in any ocular tissue was approximately 0.6 per cent, whereas the mean level of expression was greater (1.2–1.4 per cent) in most other tissues (such as nasal cavity, lung parenchyma, ileum, colon, heart) examined.
T84 4538-4540 Sentence denotes 42
T85 4541-4593 Sentence denotes CD209 can be found on human corneal dendritic cells.
T86 4594-4809 Sentence denotes 35 CD26 is not expressed in normal conjunctival tissue, and has only been found, and then only weakly expressed, in vascular endothelial cells of conjunctival tissue from biopsies of vernal conjunctivitis patients.
T87 4810-4951 Sentence denotes 37 The only report of CD66e in the conjunctiva was from patients with trachoma who had gene expression in their upper palpebral conjunctiva.
T88 4952-5013 Sentence denotes 39 There are no reports of CD26 or CD66e in cornea or tears.
T89 5014-5134 Sentence denotes CD13 has not been reported on conjunctival or corneal epithelial cells, but has been found on human corneal keratocytes.
T90 5135-5223 Sentence denotes 43 9‐O‐acetylated sialic acid has been found in human tears and on human corneal mucin.
T91 5224-5303 Sentence denotes 44 Heparan sulfate has been found on human cornea and conjunctiva cells.45, 46
T92 5304-5441 Sentence denotes In summary, the ocular surface does possess the ubiquitous viral receptor heparan sulfate, which can facilitate initial viral attachment.
T93 5442-5500 Sentence denotes However, this is not sufficient for coronavirus infection.
T94 5501-5633 Sentence denotes Furthermore, lactoferrin that is present in high concentrations in tears (2 mg/ml) 47 prevents viral attachment to heparan sulfate.
T95 5634-5845 Sentence denotes 19 The ocular surface appears to possess the SARS‐CoV‐2, SAR‐CoV and NL63 receptor ACE2, but may not possess the TMPRSS2 or Furin proteins, which is required for the spike protein of SARS‐CoV‐2 to bind to ACE2.
T96 5846-6149 Sentence denotes Furthermore, apart from 9‐O‐acetylated sialic acid, the other co‐receptors for coronaviruses (CD209, CD26, CD13, CD66e), have been found either in fibroblasts and dendritic cells that lie in tissue under the surface corneal and conjunctival epithelial cells, or have not been reported in ocular tissues.
T97 6150-6361 Sentence denotes It is possible that the 9‐O‐acetylated sialic acid associated with proteins in tears can act as a decoy receptor, binding to the viruses and preventing them binding to cell‐associated 9‐O‐acetylated sialic acid.
T98 6362-6493 Sentence denotes 44 Therefore, the evidence to date suggests that coronaviruses are unlikely to bind to ocular surface cells to initiate infection.