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PMC:7272971 / 12463-13225 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
418 0-5 Gene denotes CD209 Gene:30835
419 292-297 Gene denotes CD66e Gene:1048
420 447-452 Gene denotes CD66e Gene:1048
421 676-681 Gene denotes mucin Gene:100508689
422 22-27 Species denotes human Tax:9606
423 259-267 Species denotes patients Tax:9606
424 326-334 Species denotes patients Tax:9606
425 567-572 Species denotes human Tax:9606
426 643-648 Species denotes human Tax:9606
427 662-667 Species denotes human Tax:9606
428 721-726 Species denotes human Tax:9606
429 613-624 Chemical denotes sialic acid MESH:D019158
430 687-702 Chemical denotes Heparan sulfate MESH:D006497
431 28-45 Disease denotes corneal dendritic MESH:D003316
432 237-258 Disease denotes vernal conjunctivitis MESH:D003233
433 340-348 Disease denotes trachoma MESH:D014141
434 382-409 Disease denotes upper palpebral conjunctiva MESH:C563620
435 519-526 Disease denotes corneal MESH:D003316
436 573-580 Disease denotes corneal MESH:D003316
437 668-675 Disease denotes corneal MESH:D003316

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T140 36-51 Body_part denotes dendritic cells http://purl.org/sig/ont/fma/fma273565
T141 46-51 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T142 102-108 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T143 179-196 Body_part denotes endothelial cells http://purl.org/sig/ont/fma/fma66772
T144 191-196 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T145 213-219 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637
T146 305-316 Body_part denotes conjunctiva http://purl.org/sig/ont/fma/fma59011
T147 357-361 Body_part denotes gene http://purl.org/sig/ont/fma/fma74402
T148 382-409 Body_part denotes upper palpebral conjunctiva http://purl.org/sig/ont/fma/fma59026
T149 456-462 Body_part denotes cornea http://purl.org/sig/ont/fma/fma58238
T150 466-471 Body_part denotes tears http://purl.org/sig/ont/fma/fma59756
T151 519-543 Body_part denotes corneal epithelial cells http://purl.org/sig/ont/fma/fma70551
T152 538-543 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T153 573-592 Body_part denotes corneal keratocytes http://purl.org/sig/ont/fma/fma0326141
T154 649-654 Body_part denotes tears http://purl.org/sig/ont/fma/fma59756
T155 687-702 Body_part denotes Heparan sulfate http://purl.org/sig/ont/fma/fma63023
T156 687-694 Body_part denotes Heparan http://purl.org/sig/ont/fma/fma67110
T157 727-733 Body_part denotes cornea http://purl.org/sig/ont/fma/fma58238
T158 738-749 Body_part denotes conjunctiva http://purl.org/sig/ont/fma/fma59011
T159 750-755 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T45 102-108 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T46 213-219 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479
T47 305-316 Body_part denotes conjunctiva http://purl.obolibrary.org/obo/UBERON_0001811
T48 388-409 Body_part denotes palpebral conjunctiva http://purl.obolibrary.org/obo/UBERON_0001812
T49 398-409 Body_part denotes conjunctiva http://purl.obolibrary.org/obo/UBERON_0001811
T50 456-462 Body_part denotes cornea http://purl.obolibrary.org/obo/UBERON_0000964
T51 727-733 Body_part denotes cornea http://purl.obolibrary.org/obo/UBERON_0000964
T52 738-749 Body_part denotes conjunctiva http://purl.obolibrary.org/obo/UBERON_0001811

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T8 244-258 Phenotype denotes conjunctivitis http://purl.obolibrary.org/obo/HP_0000509

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T65 237-258 Disease denotes vernal conjunctivitis http://purl.obolibrary.org/obo/MONDO_0002313
T66 244-258 Disease denotes conjunctivitis http://purl.obolibrary.org/obo/MONDO_0003799
T67 340-348 Disease denotes trachoma http://purl.obolibrary.org/obo/MONDO_0001249

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T178 22-27 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T179 36-51 http://purl.obolibrary.org/obo/CL_0000451 denotes dendritic cells
T180 53-55 http://purl.obolibrary.org/obo/CLO_0001000 denotes 35
T181 114-117 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T182 179-196 http://purl.obolibrary.org/obo/CL_0000115 denotes endothelial cells
T183 305-316 http://purl.obolibrary.org/obo/UBERON_0001811 denotes conjunctiva
T184 305-316 http://www.ebi.ac.uk/efo/EFO_0000374 denotes conjunctiva
T185 357-361 http://purl.obolibrary.org/obo/OGG_0000000002 denotes gene
T186 398-409 http://purl.obolibrary.org/obo/UBERON_0001811 denotes conjunctiva
T187 398-409 http://www.ebi.ac.uk/efo/EFO_0000374 denotes conjunctiva
T188 456-462 http://purl.obolibrary.org/obo/UBERON_0000964 denotes cornea
T189 456-462 http://www.ebi.ac.uk/efo/EFO_0000377 denotes cornea
T190 478-481 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T191 527-537 http://purl.obolibrary.org/obo/CL_0000066 denotes epithelial
T192 538-543 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T193 549-552 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T194 567-572 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T195 625-628 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T196 643-648 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T197 662-667 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T198 703-706 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T199 721-726 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T200 727-733 http://purl.obolibrary.org/obo/UBERON_0000964 denotes cornea
T201 727-733 http://www.ebi.ac.uk/efo/EFO_0000377 denotes cornea
T202 738-749 http://purl.obolibrary.org/obo/UBERON_0001811 denotes conjunctiva
T203 738-749 http://www.ebi.ac.uk/efo/EFO_0000374 denotes conjunctiva
T204 750-755 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T205 756-758 http://purl.obolibrary.org/obo/CLO_0053799 denotes 45

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T48 613-624 Chemical denotes sialic acid http://purl.obolibrary.org/obo/CHEBI_26667
T49 620-624 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T50 687-702 Chemical denotes Heparan sulfate http://purl.obolibrary.org/obo/CHEBI_28815
T51 695-702 Chemical denotes sulfate http://purl.obolibrary.org/obo/CHEBI_16189

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T3 357-372 http://purl.obolibrary.org/obo/GO_0010467 denotes gene expression

LitCovid-PD-GlycoEpitope

Id Subject Object Predicate Lexical cue glyco_epitope_db_id
T3 687-702 GlycoEpitope denotes Heparan sulfate http://www.glycoepitope.jp/epitopes/EP0086

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T85 0-52 Sentence denotes CD209 can be found on human corneal dendritic cells.
T86 53-268 Sentence denotes 35 CD26 is not expressed in normal conjunctival tissue, and has only been found, and then only weakly expressed, in vascular endothelial cells of conjunctival tissue from biopsies of vernal conjunctivitis patients.
T87 269-410 Sentence denotes 37 The only report of CD66e in the conjunctiva was from patients with trachoma who had gene expression in their upper palpebral conjunctiva.
T88 411-472 Sentence denotes 39 There are no reports of CD26 or CD66e in cornea or tears.
T89 473-593 Sentence denotes CD13 has not been reported on conjunctival or corneal epithelial cells, but has been found on human corneal keratocytes.
T90 594-682 Sentence denotes 43 9‐O‐acetylated sialic acid has been found in human tears and on human corneal mucin.
T91 683-762 Sentence denotes 44 Heparan sulfate has been found on human cornea and conjunctiva cells.45, 46