PMC:7269710 / 22717-24366
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 348 | 176-182 | Species | denotes | people | Tax:9606 |
| 349 | 351-357 | Species | denotes | people | Tax:9606 |
| 350 | 645-653 | Species | denotes | patients | Tax:9606 |
| 351 | 769-777 | Species | denotes | patients | Tax:9606 |
| 352 | 1228-1238 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 353 | 1472-1482 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 354 | 325-334 | Disease | denotes | pneumonia | MESH:D011014 |
| 355 | 607-616 | Disease | denotes | pneumonia | MESH:D011014 |
| 356 | 1214-1222 | Disease | denotes | infected | MESH:D007239 |
| 357 | 1399-1407 | Disease | denotes | COVID-19 | MESH:C000657245 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T100 | 325-334 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T101 | 607-616 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
| T102 | 1228-1236 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T103 | 1399-1407 | Disease | denotes | COVID-19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T104 | 1472-1480 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T181 | 67-68 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T182 | 188-189 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T183 | 434-435 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
| T184 | 519-526 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T185 | 577-580 | http://purl.obolibrary.org/obo/CLO_0050884 | denotes | ten |
| T186 | 634-641 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | testing |
| T187 | 764-768 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | test |
| T188 | 965-970 | http://purl.obolibrary.org/obo/CLO_0009985 | denotes | focus |
| T189 | 1321-1326 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T190 | 1483-1488 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T191 | 1543-1544 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T213 | 0-262 | Sentence | denotes | Therefore, it is important that countries, particularly those with a high travel volume from China, enhance their surveillance system to identify local cases, not merely among people with a travel history to China because cases could be present in the community. |
| T214 | 263-527 | Sentence | denotes | The local cases in cluster C were identified through enhanced pneumonia surveillance of people who had no history of travel to China, whereas the initial cases in cluster A were identified because of heightened suspicion by health-care workers, leading to testing. |
| T215 | 528-850 | Sentence | denotes | Among the first 84 confirmed cases in Singapore, ten were detected by enhanced pneumonia surveillance and testing of patients in intensive care units, and another eight affected individuals were detected based on doctors' discretion to test patients whom they viewed with suspicion for clinical or epidemiological reasons. |
| T216 | 851-1064 | Sentence | denotes | Such surveillance systems are, therefore, important to identify cases in the community who would be missed if the focus were only on travellers, and they have enabled prompt investigation and containment measures. |
| T217 | 1065-1327 | Sentence | denotes | Furthermore, with swift response in contact tracing and quarantine of close contacts, two close contacts developed symptoms and were confirmed to be infected with SARS-CoV-2 during their period of quarantine, ensuring no further onward transmission of the virus. |
| T218 | 1328-1649 | Sentence | denotes | Only two of 425 close contacts identified by contact tracing developed COVID-19 (ie, most cases identified in the clusters did not transmit the SARS-CoV-2 virus to their close contacts), raising the hypothesis that a few spreading events can result in clusters of transmission, whereas for most cases, transmission ended. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T26 | 325-334 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |
| T27 | 607-616 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |