PMC:7267510 / 50721-51945
Annnotations
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T298 | 31-35 | Body_part | denotes | back | http://purl.org/sig/ont/fma/fma25056 |
| T299 | 424-431 | Body_part | denotes | trachea | http://purl.org/sig/ont/fma/fma7394 |
| T300 | 550-555 | Body_part | denotes | nerve | http://purl.org/sig/ont/fma/fma65132 |
LitCovid-PD-UBERON
| Id | Subject | Object | Predicate | Lexical cue | uberon_id |
|---|---|---|---|---|---|
| T284 | 318-322 | Body_part | denotes | tube | http://purl.obolibrary.org/obo/UBERON_0000025 |
| T285 | 424-431 | Body_part | denotes | trachea | http://purl.obolibrary.org/obo/UBERON_0003126 |
| T286 | 470-474 | Body_part | denotes | tube | http://purl.obolibrary.org/obo/UBERON_0000025 |
| T287 | 550-555 | Body_part | denotes | nerve | http://purl.obolibrary.org/obo/UBERON_0001021 |
| T288 | 716-720 | Body_part | denotes | tube | http://purl.obolibrary.org/obo/UBERON_0000025 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T393 | 828-837 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T394 | 1179-1187 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T623 | 115-116 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T624 | 226-232 | http://purl.obolibrary.org/obo/UBERON_0001005 | denotes | airway |
| T625 | 318-322 | http://purl.obolibrary.org/obo/UBERON_0000025 | denotes | tube |
| T626 | 343-344 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T627 | 459-460 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T628 | 470-474 | http://purl.obolibrary.org/obo/UBERON_0000025 | denotes | tube |
| T629 | 524-529 | http://purl.obolibrary.org/obo/UBERON_0000025 | denotes | tubes |
| T630 | 550-555 | http://purl.obolibrary.org/obo/UBERON_0001021 | denotes | nerve |
| T631 | 608-614 | http://purl.obolibrary.org/obo/UBERON_0001005 | denotes | airway |
| T632 | 630-631 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T633 | 672-673 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T634 | 716-720 | http://purl.obolibrary.org/obo/UBERON_0000025 | denotes | tube |
| T635 | 867-873 | http://purl.obolibrary.org/obo/UBERON_0001005 | denotes | airway |
| T636 | 1005-1006 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T637 | 1045-1046 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T638 | 1113-1121 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
| T639 | 1155-1161 | http://purl.obolibrary.org/obo/UBERON_0000473 | denotes | tested |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T5684 | 138-148 | Chemical | denotes | technetium | http://purl.obolibrary.org/obo/CHEBI_33353 |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T31 | 79-88 | http://purl.obolibrary.org/obo/GO_0007585 | denotes | breathing |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T186 | 63-70 | Phenotype | denotes | dyspnea | http://purl.obolibrary.org/obo/HP_0002094 |
| T187 | 79-101 | Phenotype | denotes | breathing difficulties | http://purl.obolibrary.org/obo/HP_0002098 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T391 | 0-71 | Sentence | denotes | The next week, the patient was back in the emergency room with dyspnea. |
| T392 | 72-212 | Sentence | denotes | Due to breathing difficulties, we canceled a planned parathyroid (technetium 99 sestamibi) nuclear scan, and surgery was scheduled urgently. |
| T393 | 213-475 | Sentence | denotes | The plan for airway management was awake fiberoptic intubation with the smallest reinforced endotracheal tube that would fit over a flexible bronchoscope and was long enough to reach beyond the narrowing of the trachea, which was estimated to be a size six tube. |
| T394 | 476-577 | Sentence | denotes | We would not be able to use the larger diameter tubes with electrodes for nerve integrity monitoring. |
| T395 | 578-721 | Sentence | denotes | The emergency backup plan for airway management was a cricothyroidotomy to allow placement of a smaller diameter, shorter, pediatric size tube. |
| T396 | 722-771 | Sentence | denotes | At this point the pandemic was in its ascendance. |
| T397 | 772-885 | Sentence | denotes | Significant questions were raised regarding the risk of infection of the team during emergency airway management. |
| T398 | 886-1141 | Sentence | denotes | Therefore, given that she was comfortable on room air at rest, the patient was discharged, and surgery was delayed for a few days so that it could be moved to a cardiac bypass operating room which was set up for extracorporeal membrane oxygenation (ECMO). |
| T399 | 1142-1224 | Sentence | denotes | She also was tested and negative for COVID‐19 by nasopharyngeal swab RT‐PCR assay. |
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 734 | 19-26 | Species | denotes | patient | Tax:9606 |
| 735 | 953-960 | Species | denotes | patient | Tax:9606 |
| 736 | 138-161 | Chemical | denotes | technetium 99 sestamibi | |
| 737 | 63-70 | Disease | denotes | dyspnea | MESH:D004417 |
| 738 | 828-837 | Disease | denotes | infection | MESH:D007239 |
| 739 | 1179-1187 | Disease | denotes | COVID‐19 | MESH:C000657245 |