PMC:7267243 / 68-913
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 12 | 20-28 | Species | denotes | Patients | Tax:9606 |
| 13 | 34-69 | Disease | denotes | acute respiratory distress syndrome | MESH:D012128 |
| 14 | 71-75 | Disease | denotes | ARDS | MESH:D012128 |
| 15 | 84-99 | Disease | denotes | viral infection | MESH:D001102 |
| 16 | 145-167 | Disease | denotes | invasive aspergillosis | MESH:D055744 |
| 17 | 189-211 | Disease | denotes | coronavirus disease 19 | MESH:C000657245 |
| 18 | 213-221 | Disease | denotes | COVID‐19 | MESH:C000657245 |
| 19 | 234-256 | Disease | denotes | invasive aspergillosis | MESH:D055744 |
| 23 | 342-350 | Species | denotes | patients | Tax:9606 |
| 24 | 356-364 | Disease | denotes | COVID‐19 | MESH:C000657245 |
| 25 | 376-380 | Disease | denotes | ARDS | MESH:D012128 |
| 31 | 607-615 | Species | denotes | patients | Tax:9606 |
| 32 | 503-511 | Disease | denotes | COVID‐19 | MESH:C000657245 |
| 33 | 523-555 | Disease | denotes | invasive pulmonary aspergillosis | MESH:D055744 |
| 34 | 592-606 | Disease | denotes | critically ill | MESH:D016638 |
| 35 | 640-644 | Disease | denotes | ARDS | MESH:D012128 |
| 41 | 680-688 | Species | denotes | patients | Tax:9606 |
| 42 | 694-698 | Disease | denotes | ARDS | MESH:D012128 |
| 43 | 706-714 | Disease | denotes | COVID‐19 | MESH:C000657245 |
| 44 | 731-763 | Disease | denotes | invasive pulmonary aspergillosis | MESH:D055744 |
| 45 | 832-844 | Disease | denotes | co‐infection | MESH:D060085 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T3 | 34-69 | Disease | denotes | acute respiratory distress syndrome | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T4 | 40-69 | Disease | denotes | respiratory distress syndrome | http://purl.obolibrary.org/obo/MONDO_0009971 |
| T5 | 71-75 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T6 | 84-99 | Disease | denotes | viral infection | http://purl.obolibrary.org/obo/MONDO_0005108 |
| T7 | 90-99 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
| T8 | 145-167 | Disease | denotes | invasive aspergillosis | http://purl.obolibrary.org/obo/MONDO_0000240 |
| T9 | 154-167 | Disease | denotes | aspergillosis | http://purl.obolibrary.org/obo/MONDO_0005657 |
| T10 | 213-221 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T11 | 234-256 | Disease | denotes | invasive aspergillosis | http://purl.obolibrary.org/obo/MONDO_0000240 |
| T12 | 243-256 | Disease | denotes | aspergillosis | http://purl.obolibrary.org/obo/MONDO_0005657 |
| T13 | 356-364 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T14 | 376-380 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T15 | 503-511 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T16 | 542-555 | Disease | denotes | aspergillosis | http://purl.obolibrary.org/obo/MONDO_0005657 |
| T17 | 640-644 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T18 | 694-698 | Disease | denotes | ARDS | http://purl.obolibrary.org/obo/MONDO_0006502 |
| T19 | 706-714 | Disease | denotes | COVID‐19 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T20 | 750-763 | Disease | denotes | aspergillosis | http://purl.obolibrary.org/obo/MONDO_0005657 |
| T21 | 835-844 | Disease | denotes | infection | http://purl.obolibrary.org/obo/MONDO_0005550 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 9-19 | http://purl.obolibrary.org/obo/BFO_0000030 | denotes | Objectives |
| T2 | 260-261 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T3 | 306-307 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | A |
LitCovid-PD-GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1 | 84-99 | http://purl.obolibrary.org/obo/GO_0016032 | denotes | viral infection |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T4 | 0-7 | Sentence | denotes | Summary |
| T5 | 9-19 | Sentence | denotes | Objectives |
| T6 | 20-168 | Sentence | denotes | Patients with acute respiratory distress syndrome (ARDS) due to viral infection are at risk for secondary complications like invasive aspergillosis. |
| T7 | 169-296 | Sentence | denotes | Our study evaluates coronavirus disease 19 (COVID‐19) associated invasive aspergillosis at a single centre in Cologne, Germany. |
| T8 | 298-305 | Sentence | denotes | Methods |
| T9 | 306-493 | Sentence | denotes | A retrospective chart review of all patients with COVID‐19 associated ARDS admitted to the medical or surgical intensive care unit at the University Hospital of Cologne, Cologne, Germany. |
| T10 | 495-502 | Sentence | denotes | Results |
| T11 | 503-645 | Sentence | denotes | COVID‐19 associated invasive pulmonary aspergillosis was found in five of 19 consecutive critically ill patients with moderate to severe ARDS. |
| T12 | 647-657 | Sentence | denotes | Conclusion |
| T13 | 658-845 | Sentence | denotes | Clinicians caring for patients with ARDS due to COVID‐19 should consider invasive pulmonary aspergillosis and subject respiratory samples to comprehensive analysis to detect co‐infection. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 40-60 | Phenotype | denotes | respiratory distress | http://purl.obolibrary.org/obo/HP_0002098 |
| T2 | 523-555 | Phenotype | denotes | invasive pulmonary aspergillosis | http://purl.obolibrary.org/obo/HP_0020103 |
| T3 | 731-763 | Phenotype | denotes | invasive pulmonary aspergillosis | http://purl.obolibrary.org/obo/HP_0020103 |