PMC:7267243 / 5959-6713 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"196","span":{"begin":413,"end":416},"obj":"Gene"},{"id":"197","span":{"begin":331,"end":335},"obj":"Species"},{"id":"198","span":{"begin":337,"end":358},"obj":"Species"},{"id":"199","span":{"begin":15,"end":19},"obj":"Disease"},{"id":"200","span":{"begin":21,"end":56},"obj":"Disease"},{"id":"201","span":{"begin":111,"end":115},"obj":"Disease"},{"id":"202","span":{"begin":117,"end":154},"obj":"Disease"},{"id":"203","span":{"begin":241,"end":247},"obj":"Disease"},{"id":"204","span":{"begin":297,"end":329},"obj":"Disease"},{"id":"205","span":{"begin":365,"end":397},"obj":"Disease"}],"attributes":[{"id":"A196","pred":"tao:has_database_id","subj":"196","obj":"Gene:7939"},{"id":"A197","pred":"tao:has_database_id","subj":"197","obj":"Tax:162145"},{"id":"A198","pred":"tao:has_database_id","subj":"198","obj":"Tax:162145"},{"id":"A199","pred":"tao:has_database_id","subj":"199","obj":"MESH:D012128"},{"id":"A200","pred":"tao:has_database_id","subj":"200","obj":"MESH:D012128"},{"id":"A201","pred":"tao:has_database_id","subj":"201","obj":"MESH:D029424"},{"id":"A202","pred":"tao:has_database_id","subj":"202","obj":"MESH:D029424"},{"id":"A203","pred":"tao:has_database_id","subj":"203","obj":"MESH:D009369"},{"id":"A204","pred":"tao:has_database_id","subj":"204","obj":"MESH:D029424"},{"id":"A205","pred":"tao:has_database_id","subj":"205","obj":"MESH:D055744"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Abbreviations: ARDS, acute respiratory distress syndrome; BALF, bronchoalveolar lavage fluid; BW, body weight; COPD, chronic obstructive pulmonary disease; C t, threshold cycle; EORTC/MSG, European Organization for Research and Treatment of Cancer/Mycoses Study Group; GOLD, global initiative for chronic obstructive lung disease; hMPV, human metapneumovirus; IPA, invasive pulmonary aspergillosis; kg, kilogram; lap, laparoscopic; LVB, lumbar vertebral body; mg, milligram; MIC, minimal inhibitory concentration; MICU, medical ICU; ORF, open reading frame; PCR, polymerase chain reaction; PY, pack‐year history; SICU, surgical ICU; SLEDD, slow low‐efficient daily dialysis; TA, tracheal aspirate; vvECMO, veno‐venous extracorporeal membrane oxygenation."}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T8","span":{"begin":98,"end":102},"obj":"Body_part"},{"id":"T9","span":{"begin":317,"end":321},"obj":"Body_part"},{"id":"T10","span":{"begin":437,"end":458},"obj":"Body_part"}],"attributes":[{"id":"A8","pred":"fma_id","subj":"T8","obj":"http://purl.org/sig/ont/fma/fma256135"},{"id":"A9","pred":"fma_id","subj":"T9","obj":"http://purl.org/sig/ont/fma/fma7195"},{"id":"A10","pred":"fma_id","subj":"T10","obj":"http://purl.org/sig/ont/fma/fma16075"}],"text":"Abbreviations: ARDS, acute respiratory distress syndrome; BALF, bronchoalveolar lavage fluid; BW, body weight; COPD, chronic obstructive pulmonary disease; C t, threshold cycle; EORTC/MSG, European Organization for Research and Treatment of Cancer/Mycoses Study Group; GOLD, global initiative for chronic obstructive lung disease; hMPV, human metapneumovirus; IPA, invasive pulmonary aspergillosis; kg, kilogram; lap, laparoscopic; LVB, lumbar vertebral body; mg, milligram; MIC, minimal inhibitory concentration; MICU, medical ICU; ORF, open reading frame; PCR, polymerase chain reaction; PY, pack‐year history; SICU, surgical ICU; SLEDD, slow low‐efficient daily dialysis; TA, tracheal aspirate; vvECMO, veno‐venous extracorporeal membrane oxygenation."}

{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T3","span":{"begin":317,"end":321},"obj":"Body_part"},{"id":"T4","span":{"begin":444,"end":453},"obj":"Body_part"}],"attributes":[{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/UBERON_3010224"}],"text":"Abbreviations: ARDS, acute respiratory distress syndrome; BALF, bronchoalveolar lavage fluid; BW, body weight; COPD, chronic obstructive pulmonary disease; C t, threshold cycle; EORTC/MSG, European Organization for Research and Treatment of Cancer/Mycoses Study Group; GOLD, global initiative for chronic obstructive lung disease; hMPV, human metapneumovirus; IPA, invasive pulmonary aspergillosis; kg, kilogram; lap, laparoscopic; LVB, lumbar vertebral body; mg, milligram; MIC, minimal inhibitory concentration; MICU, medical ICU; ORF, open reading frame; PCR, polymerase chain reaction; PY, pack‐year history; SICU, surgical ICU; SLEDD, slow low‐efficient daily dialysis; TA, tracheal aspirate; vvECMO, veno‐venous extracorporeal membrane oxygenation."}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T77","span":{"begin":15,"end":19},"obj":"Disease"},{"id":"T78","span":{"begin":21,"end":56},"obj":"Disease"},{"id":"T79","span":{"begin":27,"end":56},"obj":"Disease"},{"id":"T80","span":{"begin":111,"end":154},"obj":"Disease"},{"id":"T81","span":{"begin":137,"end":154},"obj":"Disease"},{"id":"T82","span":{"begin":241,"end":247},"obj":"Disease"},{"id":"T83","span":{"begin":248,"end":255},"obj":"Disease"},{"id":"T84","span":{"begin":297,"end":329},"obj":"Disease"},{"id":"T85","span":{"begin":305,"end":329},"obj":"Disease"},{"id":"T86","span":{"begin":317,"end":329},"obj":"Disease"},{"id":"T87","span":{"begin":384,"end":397},"obj":"Disease"},{"id":"T88","span":{"begin":675,"end":677},"obj":"Disease"}],"attributes":[{"id":"A77","pred":"mondo_id","subj":"T77","obj":"http://purl.obolibrary.org/obo/MONDO_0006502"},{"id":"A78","pred":"mondo_id","subj":"T78","obj":"http://purl.obolibrary.org/obo/MONDO_0006502"},{"id":"A79","pred":"mondo_id","subj":"T79","obj":"http://purl.obolibrary.org/obo/MONDO_0009971"},{"id":"A80","pred":"mondo_id","subj":"T80","obj":"http://purl.obolibrary.org/obo/MONDO_0005002"},{"id":"A81","pred":"mondo_id","subj":"T81","obj":"http://purl.obolibrary.org/obo/MONDO_0005275"},{"id":"A82","pred":"mondo_id","subj":"T82","obj":"http://purl.obolibrary.org/obo/MONDO_0004992"},{"id":"A83","pred":"mondo_id","subj":"T83","obj":"http://purl.obolibrary.org/obo/MONDO_0002041"},{"id":"A84","pred":"mondo_id","subj":"T84","obj":"http://purl.obolibrary.org/obo/MONDO_0005002"},{"id":"A85","pred":"mondo_id","subj":"T85","obj":"http://purl.obolibrary.org/obo/MONDO_0002267"},{"id":"A86","pred":"mondo_id","subj":"T86","obj":"http://purl.obolibrary.org/obo/MONDO_0005275"},{"id":"A87","pred":"mondo_id","subj":"T87","obj":"http://purl.obolibrary.org/obo/MONDO_0005657"},{"id":"A88","pred":"mondo_id","subj":"T88","obj":"http://purl.obolibrary.org/obo/MONDO_0017991"}],"text":"Abbreviations: ARDS, acute respiratory distress syndrome; BALF, bronchoalveolar lavage fluid; BW, body weight; COPD, chronic obstructive pulmonary disease; C t, threshold cycle; EORTC/MSG, European Organization for Research and Treatment of Cancer/Mycoses Study Group; GOLD, global initiative for chronic obstructive lung disease; hMPV, human metapneumovirus; IPA, invasive pulmonary aspergillosis; kg, kilogram; lap, laparoscopic; LVB, lumbar vertebral body; mg, milligram; MIC, minimal inhibitory concentration; MICU, medical ICU; ORF, open reading frame; PCR, polymerase chain reaction; PY, pack‐year history; SICU, surgical ICU; SLEDD, slow low‐efficient daily dialysis; TA, tracheal aspirate; vvECMO, veno‐venous extracorporeal membrane oxygenation."}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T46","span":{"begin":198,"end":210},"obj":"http://purl.obolibrary.org/obo/OBI_0000245"},{"id":"T47","span":{"begin":317,"end":321},"obj":"http://purl.obolibrary.org/obo/UBERON_0002048"},{"id":"T48","span":{"begin":317,"end":321},"obj":"http://www.ebi.ac.uk/efo/EFO_0000934"},{"id":"T49","span":{"begin":337,"end":342},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_9606"},{"id":"T50","span":{"begin":444,"end":453},"obj":"http://purl.obolibrary.org/obo/NCBITaxon_7742"},{"id":"T51","span":{"begin":733,"end":741},"obj":"http://purl.obolibrary.org/obo/UBERON_0000158"}],"text":"Abbreviations: ARDS, acute respiratory distress syndrome; BALF, bronchoalveolar lavage fluid; BW, body weight; COPD, chronic obstructive pulmonary disease; C t, threshold cycle; EORTC/MSG, European Organization for Research and Treatment of Cancer/Mycoses Study Group; GOLD, global initiative for chronic obstructive lung disease; hMPV, human metapneumovirus; IPA, invasive pulmonary aspergillosis; kg, kilogram; lap, laparoscopic; LVB, lumbar vertebral body; mg, milligram; MIC, minimal inhibitory concentration; MICU, medical ICU; ORF, open reading frame; PCR, polymerase chain reaction; PY, pack‐year history; SICU, surgical ICU; SLEDD, slow low‐efficient daily dialysis; TA, tracheal aspirate; vvECMO, veno‐venous extracorporeal membrane oxygenation."}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T57","span":{"begin":184,"end":187},"obj":"Chemical"},{"id":"T59","span":{"begin":269,"end":273},"obj":"Chemical"},{"id":"T60","span":{"begin":360,"end":363},"obj":"Chemical"},{"id":"T62","span":{"begin":475,"end":478},"obj":"Chemical"},{"id":"T63","span":{"begin":590,"end":592},"obj":"Chemical"},{"id":"T64","span":{"begin":675,"end":677},"obj":"Chemical"}],"attributes":[{"id":"A57","pred":"chebi_id","subj":"T57","obj":"http://purl.obolibrary.org/obo/CHEBI_64220"},{"id":"A58","pred":"chebi_id","subj":"T57","obj":"http://purl.obolibrary.org/obo/CHEBI_64243"},{"id":"A59","pred":"chebi_id","subj":"T59","obj":"http://purl.obolibrary.org/obo/CHEBI_59965"},{"id":"A60","pred":"chebi_id","subj":"T60","obj":"http://purl.obolibrary.org/obo/CHEBI_17824"},{"id":"A61","pred":"chebi_id","subj":"T60","obj":"http://purl.obolibrary.org/obo/CHEBI_30802"},{"id":"A62","pred":"chebi_id","subj":"T62","obj":"http://purl.obolibrary.org/obo/CHEBI_59059"},{"id":"A63","pred":"chebi_id","subj":"T63","obj":"http://purl.obolibrary.org/obo/CHEBI_74799"},{"id":"A64","pred":"chebi_id","subj":"T64","obj":"http://purl.obolibrary.org/obo/CHEBI_74824"}],"text":"Abbreviations: ARDS, acute respiratory distress syndrome; BALF, bronchoalveolar lavage fluid; BW, body weight; COPD, chronic obstructive pulmonary disease; C t, threshold cycle; EORTC/MSG, European Organization for Research and Treatment of Cancer/Mycoses Study Group; GOLD, global initiative for chronic obstructive lung disease; hMPV, human metapneumovirus; IPA, invasive pulmonary aspergillosis; kg, kilogram; lap, laparoscopic; LVB, lumbar vertebral body; mg, milligram; MIC, minimal inhibitory concentration; MICU, medical ICU; ORF, open reading frame; PCR, polymerase chain reaction; PY, pack‐year history; SICU, surgical ICU; SLEDD, slow low‐efficient daily dialysis; TA, tracheal aspirate; vvECMO, veno‐venous extracorporeal membrane oxygenation."}

{"project":"LitCovid-sentences","denotations":[{"id":"T85","span":{"begin":0,"end":754},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Abbreviations: ARDS, acute respiratory distress syndrome; BALF, bronchoalveolar lavage fluid; BW, body weight; COPD, chronic obstructive pulmonary disease; C t, threshold cycle; EORTC/MSG, European Organization for Research and Treatment of Cancer/Mycoses Study Group; GOLD, global initiative for chronic obstructive lung disease; hMPV, human metapneumovirus; IPA, invasive pulmonary aspergillosis; kg, kilogram; lap, laparoscopic; LVB, lumbar vertebral body; mg, milligram; MIC, minimal inhibitory concentration; MICU, medical ICU; ORF, open reading frame; PCR, polymerase chain reaction; PY, pack‐year history; SICU, surgical ICU; SLEDD, slow low‐efficient daily dialysis; TA, tracheal aspirate; vvECMO, veno‐venous extracorporeal membrane oxygenation."}

{"project":"LitCovid-PD-HP","denotations":[{"id":"T29","span":{"begin":27,"end":47},"obj":"Phenotype"},{"id":"T30","span":{"begin":111,"end":115},"obj":"Phenotype"},{"id":"T31","span":{"begin":117,"end":154},"obj":"Phenotype"},{"id":"T32","span":{"begin":241,"end":247},"obj":"Phenotype"},{"id":"T33","span":{"begin":305,"end":329},"obj":"Phenotype"},{"id":"T34","span":{"begin":360,"end":363},"obj":"Phenotype"},{"id":"T35","span":{"begin":365,"end":397},"obj":"Phenotype"}],"attributes":[{"id":"A29","pred":"hp_id","subj":"T29","obj":"http://purl.obolibrary.org/obo/HP_0002098"},{"id":"A30","pred":"hp_id","subj":"T30","obj":"http://purl.obolibrary.org/obo/HP_0006510"},{"id":"A31","pred":"hp_id","subj":"T31","obj":"http://purl.obolibrary.org/obo/HP_0006510"},{"id":"A32","pred":"hp_id","subj":"T32","obj":"http://purl.obolibrary.org/obo/HP_0002664"},{"id":"A33","pred":"hp_id","subj":"T33","obj":"http://purl.obolibrary.org/obo/HP_0006536"},{"id":"A34","pred":"hp_id","subj":"T34","obj":"http://purl.obolibrary.org/obo/HP_0020103"},{"id":"A35","pred":"hp_id","subj":"T35","obj":"http://purl.obolibrary.org/obo/HP_0020103"}],"text":"Abbreviations: ARDS, acute respiratory distress syndrome; BALF, bronchoalveolar lavage fluid; BW, body weight; COPD, chronic obstructive pulmonary disease; C t, threshold cycle; EORTC/MSG, European Organization for Research and Treatment of Cancer/Mycoses Study Group; GOLD, global initiative for chronic obstructive lung disease; hMPV, human metapneumovirus; IPA, invasive pulmonary aspergillosis; kg, kilogram; lap, laparoscopic; LVB, lumbar vertebral body; mg, milligram; MIC, minimal inhibitory concentration; MICU, medical ICU; ORF, open reading frame; PCR, polymerase chain reaction; PY, pack‐year history; SICU, surgical ICU; SLEDD, slow low‐efficient daily dialysis; TA, tracheal aspirate; vvECMO, veno‐venous extracorporeal membrane oxygenation."}