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PMC:7264098 / 3158-4074 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T77 0-13 NCBITaxon:11118 denotes Coronaviruses
T78 108-125 GO:0043234 denotes protein complexes
T79 131-136 NCBITaxon:10239 denotes virus
T80 231-239 GO:0016020 denotes membrane
T81 273-278 NCBITaxon:10239 denotes virus
T82 294-299 SP_6;NCBITaxon:9606 denotes human
T83 300-313 GO:0005886 denotes cell membrane
T84 328-334 SO:0001026 denotes genome
T85 342-347 NCBITaxon:10239 denotes virus
T86 376-387 GO:0006260 denotes replication
T87 410-416 SO:0000417 denotes domain
T88 420-430 SP_7 denotes SARS-CoV-2
T89 470-474 SP_10 denotes SARS
T90 517-521 SP_10 denotes SARS
T91 584-594 SP_7 denotes SARS-CoV-2
T92 604-609 SP_6;NCBITaxon:9606 denotes human
T93 610-623 PR:000036008 denotes angiotensin I
T94 645-649 PR:000003622;G_3;PG_10 denotes ACE2
T95 664-674 GO:0035376 denotes cell entry
T96 729-734 SP_6;NCBITaxon:9606 denotes human
T97 738-743 SP_6;NCBITaxon:9606 denotes human
T98 783-788 NCBITaxon:10239 denotes virus
T99 843-848 NCBITaxon:10239 denotes viral
T100 864-870 UBERON:0000479 denotes tissue
T101 899-905 UBERON:0002405;GO:0006955 denotes immune
T102 906-915 GO:0006955 denotes responses
T44924 0-13 NCBITaxon:11118 denotes Coronaviruses
T10237 108-125 GO:0043234 denotes protein complexes
T32355 131-136 NCBITaxon:10239 denotes virus
T79544 231-239 GO:0016020 denotes membrane
T42758 273-278 NCBITaxon:10239 denotes virus
T20161 294-299 SP_6;NCBITaxon:9606 denotes human
T43896 300-313 GO:0005886 denotes cell membrane
T99730 328-334 SO:0001026 denotes genome
T26328 342-347 NCBITaxon:10239 denotes virus
T27949 376-387 GO:0006260 denotes replication
T60357 410-416 SO:0000417 denotes domain
T78293 420-430 SP_7 denotes SARS-CoV-2
T17634 470-474 SP_10 denotes SARS
T54334 517-521 SP_10 denotes SARS
T61458 584-594 SP_7 denotes SARS-CoV-2
T705 604-609 SP_6;NCBITaxon:9606 denotes human
T20113 610-623 PR:000036008 denotes angiotensin I
T25995 645-649 PR:000003622;G_3;PG_10 denotes ACE2
T34070 664-674 GO:0035376 denotes cell entry
T67183 729-734 SP_6;NCBITaxon:9606 denotes human
T16190 738-743 SP_6;NCBITaxon:9606 denotes human
T40790 783-788 NCBITaxon:10239 denotes virus
T15515 843-848 NCBITaxon:10239 denotes viral
T4842 864-870 UBERON:0000479 denotes tissue
T9679 899-905 UBERON:0002405;GO:0006955 denotes immune
T78484 906-915 GO:0006955 denotes responses

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
78 610-643 Gene denotes angiotensin I converting enzyme 2 Gene:59272
79 645-649 Gene denotes ACE2 Gene:59272
80 0-13 Species denotes Coronaviruses Tax:11118
81 34-39 Species denotes clove Tax:219868
82 294-299 Species denotes human Tax:9606
83 420-430 Species denotes SARS-CoV-2 Tax:2697049
84 470-479 Species denotes SARS-CoVs Tax:694009
85 527-531 Species denotes CoVs Tax:11118
86 584-594 Species denotes SARS-CoV-2 Tax:2697049
87 604-609 Species denotes human Tax:9606
88 729-734 Species denotes human Tax:9606
89 738-743 Species denotes human Tax:9606

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T25 108-125 Body_part denotes protein complexes http://purl.org/sig/ont/fma/fma67906
T26 108-115 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T27 222-227 Body_part denotes cells http://purl.org/sig/ont/fma/fma68646
T28 300-313 Body_part denotes cell membrane http://purl.org/sig/ont/fma/fma63841
T29 300-304 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T30 328-334 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T31 361-365 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T32 492-502 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T33 544-554 Body_part denotes amino acid http://purl.org/sig/ont/fma/fma82739
T34 664-668 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T35 864-870 Body_part denotes tissue http://purl.org/sig/ont/fma/fma9637

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T6 864-870 Body_part denotes tissue http://purl.obolibrary.org/obo/UBERON_0000479

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T22 420-428 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T23 420-424 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T24 470-474 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T25 517-521 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T26 584-592 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T27 584-588 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T33 108-125 http://purl.obolibrary.org/obo/GO_0043234 denotes protein complexes
T34 131-136 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T35 153-154 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T36 190-192 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T37 222-227 http://purl.obolibrary.org/obo/GO_0005623 denotes cells
T38 229-230 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T39 231-239 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T40 255-257 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T41 255-257 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T42 273-278 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T43 294-304 http://purl.obolibrary.org/obo/CLO_0053065 denotes human cell
T44 305-313 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T45 342-347 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T46 361-365 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T47 604-609 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T48 664-668 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T49 729-734 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T50 738-743 http://purl.obolibrary.org/obo/NCBITaxon_9606 denotes human
T51 783-788 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T52 817-818 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T53 883-884 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T5 55-61 Chemical denotes corona http://purl.obolibrary.org/obo/CHEBI_37409
T6 108-115 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T7 255-257 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T8 492-502 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T9 492-497 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T10 498-502 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T11 544-554 Chemical denotes amino acid http://purl.obolibrary.org/obo/CHEBI_33709
T12 544-549 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T13 550-554 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T14 610-621 Chemical denotes angiotensin http://purl.obolibrary.org/obo/CHEBI_48433
T15 676-678 Chemical denotes Lu http://purl.obolibrary.org/obo/CHEBI_33382

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T4 206-221 http://purl.obolibrary.org/obo/GO_0044409 denotes entry into host
T5 231-246 http://purl.obolibrary.org/obo/GO_0061025 denotes membrane-fusion
T6 871-878 http://purl.obolibrary.org/obo/GO_0009606 denotes tropism
T7 899-915 http://purl.obolibrary.org/obo/GO_0006955 denotes immune responses

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T21 0-92 Sentence denotes Coronaviruses have characteristic clove-shape spikes (“corona”) protruding from the surface.
T22 93-259 Sentence denotes The spikes are protein complexes that virus uses to bind to a receptor (receptor-binding subunit S1) and mediate entry into host cells (a membrane-fusion subunit S2).
T23 260-388 Sentence denotes Upon binding virus fuses with the human cell membrane, allowing the genome of the virus to enter the cell and begin replication.
T24 389-583 Sentence denotes The receptor-binding domain of SARS-CoV-2 spikes are closely related to those of SARS-CoVs (73.8–74.9% amino acid identity) and SARS-like CoVs (75.9–76.9% amino acid identity) (Wu et al., 2020).
T25 584-757 Sentence denotes SARS-CoV-2 uses the human angiotensin I converting enzyme 2 (ACE2) receptor for cell entry (Lu et al., 2020), which could potentially facilitate human-to-human transmission.
T26 758-916 Sentence denotes In addition to mediating virus entry, the spike feature is a critical determinant of viral host range and tissue tropism and a cause of host immune responses.

2_test

Id Subject Object Predicate Lexical cue
32574317-32015508-31466289 577-581 32015508 denotes 2020
32574317-32007145-31466290 687-691 32007145 denotes 2020

MyTest

Id Subject Object Predicate Lexical cue
32574317-32015508-31466289 577-581 32015508 denotes 2020
32574317-32007145-31466290 687-691 32007145 denotes 2020