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PMC:7264098 / 1937-2930 JSONTXT

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LitCovid-PMC-OGER-BB

Id Subject Object Predicate Lexical cue
T36 16-27 NCBITaxon:11118 denotes coronavirus
T37 29-39 SP_7 denotes SARS-CoV-2
T38 41-53 SP_7 denotes severe acute
T39 54-65 SP_7;UBERON:0001004 denotes respiratory
T40 66-88 SP_7 denotes syndrome coronavirus 2
T41 145-152 NCBITaxon:7742 denotes Viruses
T42 235-243 SP_7 denotes COVID-19
T43 254-264 SP_7 denotes SARS-CoV-2
T44 282-297 SP_8;NCBITaxon:694002 denotes Betacoronavirus
T45 311-322 NCBITaxon:11118 denotes coronavirus
T46 338-345 NCBITaxon:10239 denotes viruses
T47 372-385 NCBITaxon:11118 denotes Coronaviridae
T48 430-446 NCBITaxon:7656 denotes Alphacoronavirus
T49 448-463 SP_8;NCBITaxon:694002 denotes Betacoronavirus
T50 465-481 NCBITaxon:86599 denotes Gammacoronavirus
T51 487-503 NCBITaxon:99883 denotes Deltacoronavirus
T52 541-548 NCBITaxon:40674 denotes mammals
T53 550-568 NCBITaxon:86599 denotes gammacoronaviruses
T54 576-581 NCBITaxon:8782 denotes avian
T55 582-589 NCBITaxon:species denotes species
T56 595-613 NCBITaxon:99883 denotes deltacoronaviruses
T57 626-635 NCBITaxon:40674 denotes mammalian
T58 640-645 NCBITaxon:8782 denotes avian
T59 646-653 NCBITaxon:species denotes species
T60 666-679 NCBITaxon:11118 denotes Coronaviruses
T61 721-728 NCBITaxon:10239 denotes viruses
T62 754-769 SO:0000984 denotes single-stranded
T63 774-781 SO:0001026 denotes genomes
T64 804-810 SO:0001026 denotes genome
T65 825-832 NCBITaxon:10239 denotes viruses
T66 874-880 SO:0001026 denotes genome
T67 900-907 SO:0001114 denotes helical
T68 929-949 PG_4 denotes nucleocapsid protein
T69 984-992 GO:0031975 denotes envelope
T75127 16-27 NCBITaxon:11118 denotes coronavirus
T75197 29-39 SP_7 denotes SARS-CoV-2
T42446 41-53 SP_7 denotes severe acute
T60904 54-65 SP_7;UBERON:0001004 denotes respiratory
T45940 66-88 SP_7 denotes syndrome coronavirus 2
T99103 145-152 NCBITaxon:7742 denotes Viruses
T55634 235-243 SP_7 denotes COVID-19
T14423 254-264 SP_7 denotes SARS-CoV-2
T90257 282-297 SP_8;NCBITaxon:694002 denotes Betacoronavirus
T19578 311-322 NCBITaxon:11118 denotes coronavirus
T80839 338-345 NCBITaxon:10239 denotes viruses
T43226 372-385 NCBITaxon:11118 denotes Coronaviridae
T2116 430-446 NCBITaxon:7656 denotes Alphacoronavirus
T78490 448-463 SP_8;NCBITaxon:694002 denotes Betacoronavirus
T70150 465-481 NCBITaxon:86599 denotes Gammacoronavirus
T95904 487-503 NCBITaxon:99883 denotes Deltacoronavirus
T51695 541-548 NCBITaxon:40674 denotes mammals
T58366 550-568 NCBITaxon:86599 denotes gammacoronaviruses
T92179 576-581 NCBITaxon:8782 denotes avian
T16494 582-589 NCBITaxon:species denotes species
T36564 595-613 NCBITaxon:99883 denotes deltacoronaviruses
T46781 626-635 NCBITaxon:40674 denotes mammalian
T92738 640-645 NCBITaxon:8782 denotes avian
T77692 646-653 NCBITaxon:species denotes species
T7936 666-679 NCBITaxon:11118 denotes Coronaviruses
T3297 721-728 NCBITaxon:10239 denotes viruses
T40228 754-769 SO:0000984 denotes single-stranded
T88332 774-781 SO:0001026 denotes genomes
T73059 804-810 SO:0001026 denotes genome
T59045 825-832 NCBITaxon:10239 denotes viruses
T65134 874-880 SO:0001026 denotes genome
T25336 900-907 SO:0001114 denotes helical
T29731 929-949 PG_4 denotes nucleocapsid protein
T63502 984-992 GO:0031975 denotes envelope

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
47 929-941 Gene denotes nucleocapsid Gene:43740575
48 16-27 Species denotes coronavirus Tax:11118
49 29-39 Species denotes SARS-CoV-2 Tax:2697049
50 41-88 Species denotes severe acute respiratory syndrome coronavirus 2 Tax:2697049
51 254-264 Species denotes SARS-CoV-2 Tax:2697049
52 282-297 Species denotes Betacoronavirus Tax:694002
53 311-322 Species denotes coronavirus Tax:11118
54 372-385 Species denotes Coronaviridae Tax:11118
55 448-463 Species denotes Betacoronavirus Tax:694002
56 516-533 Species denotes betacoronaviruses Tax:694002
57 626-635 Species denotes mammalian Tax:9606
58 666-679 Species denotes Coronaviruses Tax:11118
59 235-243 Disease denotes COVID-19 MESH:C000657245

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T16 770-773 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T17 774-781 Body_part denotes genomes http://purl.org/sig/ont/fma/fma84116
T18 804-810 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T19 821-824 Body_part denotes RNA http://purl.org/sig/ont/fma/fma67095
T20 874-880 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T21 942-949 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T13 29-37 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T14 29-33 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T15 41-88 Disease denotes severe acute respiratory syndrome coronavirus 2 http://purl.obolibrary.org/obo/MONDO_0100096
T16 41-74 Disease denotes severe acute respiratory syndrome http://purl.obolibrary.org/obo/MONDO_0005091
T17 235-243 Disease denotes COVID-19 http://purl.obolibrary.org/obo/MONDO_0100096
T18 254-262 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T19 254-258 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T17 0-1 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T18 145-152 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes Viruses
T19 200-203 http://purl.obolibrary.org/obo/CLO_0051582 denotes has
T20 211-212 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T21 338-345 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T22 655-657 http://purl.obolibrary.org/obo/CLO_0001022 denotes Li
T23 655-657 http://purl.obolibrary.org/obo/CLO_0007314 denotes Li
T24 721-728 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T25 825-832 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T26 857-859 http://purl.obolibrary.org/obo/CLO_0050509 denotes 27
T27 866-868 http://purl.obolibrary.org/obo/CLO_0007074 denotes kb
T28 866-868 http://purl.obolibrary.org/obo/CLO_0051988 denotes kb
T29 898-899 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T3 655-657 Chemical denotes Li http://purl.obolibrary.org/obo/CHEBI_30145
T4 942-949 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T12 0-253 Sentence denotes A new strain of coronavirus, SARS-CoV-2 (severe acute respiratory syndrome coronavirus 2, as named by the International Committee on Taxonomy of Viruses) discovered in Wuhan, China, in December 2019, has caused a global disruption and COVID-19 pandemic.
T13 254-298 Sentence denotes SARS-CoV-2 is classified as Betacoronavirus.
T14 299-386 Sentence denotes In general, coronavirus is the name of viruses that belong to the family Coronaviridae.
T15 387-429 Sentence denotes These are classified into four categories:
T16 430-504 Sentence denotes Alphacoronavirus, Betacoronavirus, Gammacoronavirus, and Deltacoronavirus.
T17 505-665 Sentence denotes Alpha- and betacoronaviruses infect mammals, gammacoronaviruses infect avian species, and deltacoronaviruses infect both mammalian and avian species (Li, 2016).
T18 666-869 Sentence denotes Coronaviruses are typically spherical, fatty enveloped viruses, which encapsulate large single-stranded RNA genomes, notably, the largest genome among all RNA viruses, typically ranging from 27 to 32 kb.
T19 870-993 Sentence denotes The genome is packed inside a helical capsid formed by the nucleocapsid protein (N) and further surrounded by the envelope.

2_test

Id Subject Object Predicate Lexical cue
32574317-27578435-31466288 659-663 27578435 denotes 2016

MyTest

Id Subject Object Predicate Lexical cue
32574317-27578435-31466288 659-663 27578435 denotes 2016