PMC:7258756 / 6490-7140 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7258756","sourcedb":"PMC","sourceid":"7258756","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7258756","text":"Detection of SARS-CoV-2 in suspected samples: Blood and throat swab (TS) specimens were collected from the suspected cases that complied with the case definition of SARS-CoV-2 infection as per the guidelines of the Ministry of Health and Family Welfare14. The TS was collected in viral transport medium. These samples were referred to the ICMR-NIV, Pune, India (which is the national reference laboratory for India, also referred as the government's apex laboratory). As of February 29, 2020, 881 samples of suspected cases referred from different States, with a travel history to Wuhan, China, and other SARS-CoV-2-affected countries, were screened.","tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"131","span":{"begin":13,"end":23},"obj":"Species"},{"id":"132","span":{"begin":605,"end":615},"obj":"Species"},{"id":"133","span":{"begin":165,"end":185},"obj":"Disease"}],"attributes":[{"id":"A131","pred":"tao:has_database_id","subj":"131","obj":"Tax:2697049"},{"id":"A132","pred":"tao:has_database_id","subj":"132","obj":"Tax:2697049"},{"id":"A133","pred":"tao:has_database_id","subj":"133","obj":"MESH:C000657245"},{"subj":"131","pred":"source","obj":"LitCovid-PubTator"},{"subj":"132","pred":"source","obj":"LitCovid-PubTator"},{"subj":"133","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T24","span":{"begin":46,"end":51},"obj":"Body_part"},{"id":"T25","span":{"begin":56,"end":62},"obj":"Body_part"}],"attributes":[{"id":"A24","pred":"fma_id","subj":"T24","obj":"http://purl.org/sig/ont/fma/fma9670"},{"id":"A25","pred":"fma_id","subj":"T25","obj":"http://purl.org/sig/ont/fma/fma228738"},{"subj":"T24","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T25","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T2","span":{"begin":46,"end":51},"obj":"Body_part"},{"id":"T3","span":{"begin":56,"end":62},"obj":"Body_part"}],"attributes":[{"id":"A2","pred":"uberon_id","subj":"T2","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"A3","pred":"uberon_id","subj":"T3","obj":"http://purl.obolibrary.org/obo/UBERON_0000341"},{"subj":"T2","pred":"source","obj":"LitCovid-PD-UBERON"},{"subj":"T3","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T58","span":{"begin":13,"end":21},"obj":"Disease"},{"id":"T59","span":{"begin":13,"end":17},"obj":"Disease"},{"id":"T60","span":{"begin":69,"end":71},"obj":"Disease"},{"id":"T62","span":{"begin":165,"end":173},"obj":"Disease"},{"id":"T63","span":{"begin":165,"end":169},"obj":"Disease"},{"id":"T64","span":{"begin":176,"end":185},"obj":"Disease"},{"id":"T65","span":{"begin":260,"end":262},"obj":"Disease"},{"id":"T67","span":{"begin":605,"end":613},"obj":"Disease"},{"id":"T68","span":{"begin":605,"end":609},"obj":"Disease"}],"attributes":[{"id":"A58","pred":"mondo_id","subj":"T58","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A59","pred":"mondo_id","subj":"T59","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A60","pred":"mondo_id","subj":"T60","obj":"http://purl.obolibrary.org/obo/MONDO_0010979"},{"id":"A61","pred":"mondo_id","subj":"T60","obj":"http://purl.obolibrary.org/obo/MONDO_0016455"},{"id":"A62","pred":"mondo_id","subj":"T62","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A63","pred":"mondo_id","subj":"T63","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A64","pred":"mondo_id","subj":"T64","obj":"http://purl.obolibrary.org/obo/MONDO_0005550"},{"id":"A65","pred":"mondo_id","subj":"T65","obj":"http://purl.obolibrary.org/obo/MONDO_0010979"},{"id":"A66","pred":"mondo_id","subj":"T65","obj":"http://purl.obolibrary.org/obo/MONDO_0016455"},{"id":"A67","pred":"mondo_id","subj":"T67","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A68","pred":"mondo_id","subj":"T68","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T58","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T59","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T60","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T62","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T63","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T64","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T65","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T67","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T68","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T58","span":{"begin":46,"end":51},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"T59","span":{"begin":46,"end":51},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"},{"id":"T60","span":{"begin":561,"end":562},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"attributes":[{"subj":"T58","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T59","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T60","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T14","span":{"begin":69,"end":71},"obj":"Chemical"},{"id":"T15","span":{"begin":260,"end":262},"obj":"Chemical"}],"attributes":[{"id":"A14","pred":"chebi_id","subj":"T14","obj":"http://purl.obolibrary.org/obo/CHEBI_73664"},{"id":"A15","pred":"chebi_id","subj":"T15","obj":"http://purl.obolibrary.org/obo/CHEBI_73664"},{"subj":"T14","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T15","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T7","span":{"begin":280,"end":295},"obj":"http://purl.obolibrary.org/obo/GO_0046794"},{"id":"T8","span":{"begin":286,"end":295},"obj":"http://purl.obolibrary.org/obo/GO_0006810"}],"attributes":[{"subj":"T7","pred":"source","obj":"LitCovid-PD-GO-BP"},{"subj":"T8","pred":"source","obj":"LitCovid-PD-GO-BP"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T51","span":{"begin":0,"end":45},"obj":"Sentence"},{"id":"T52","span":{"begin":46,"end":255},"obj":"Sentence"},{"id":"T53","span":{"begin":256,"end":303},"obj":"Sentence"},{"id":"T54","span":{"begin":304,"end":467},"obj":"Sentence"},{"id":"T55","span":{"begin":468,"end":650},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T51","pred":"source","obj":"LitCovid-sentences"},{"subj":"T52","pred":"source","obj":"LitCovid-sentences"},{"subj":"T53","pred":"source","obj":"LitCovid-sentences"},{"subj":"T54","pred":"source","obj":"LitCovid-sentences"},{"subj":"T55","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#e493ec","default":true},{"id":"LitCovid-PD-FMA-UBERON","color":"#93ecca"},{"id":"LitCovid-PD-UBERON","color":"#ecb093"},{"id":"LitCovid-PD-MONDO","color":"#9593ec"},{"id":"LitCovid-PD-CLO","color":"#aaec93"},{"id":"LitCovid-PD-CHEBI","color":"#ec93c4"},{"id":"LitCovid-PD-GO-BP","color":"#93deec"},{"id":"LitCovid-sentences","color":"#ece093"}]}]}}