PMC:7258756 / 18946-19751
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 275 | 171-189 | Gene | denotes | Interferon (IFN)-γ | Gene:3458 |
| 277 | 50-55 | Gene | denotes | spike | Gene:43740568 |
| 279 | 685-690 | Gene | denotes | IFN-γ | Gene:3458 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T96 | 19-23 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T97 | 56-63 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T151 | 78-125 | Disease | denotes | severe acute respiratory syndrome coronavirus 2 | http://purl.obolibrary.org/obo/MONDO_0100096 |
| T152 | 78-111 | Disease | denotes | severe acute respiratory syndrome | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T129 | 17-23 | http://purl.obolibrary.org/obo/CL_0000236 | denotes | B-cell |
| T130 | 126-133 | http://purl.obolibrary.org/obo/PR_000018263 | denotes | Peptide |
| T131 | 200-203 | http://purl.obolibrary.org/obo/CLO_0001178 | denotes | 243 |
| T132 | 200-203 | http://purl.obolibrary.org/obo/CLO_0052433 | denotes | 243 |
| T133 | 553-554 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T96 | 6-8 | Chemical | denotes | II | http://purl.obolibrary.org/obo/CHEBI_74067 |
| T97 | 56-63 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T98 | 126-133 | Chemical | denotes | Peptide | http://purl.obolibrary.org/obo/CHEBI_16670 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T143 | 0-125 | Sentence | denotes | Table II Linear B-cell epitopes predicted on the spike protein of the Indian severe acute respiratory syndrome coronavirus 2 |
| T144 | 126-199 | Sentence | denotes | Peptide Epitope probability Vaxigen score Interferon (IFN)-γ response# |
| T145 | 200-261 | Sentence | denotes | 243-HRSYLTPGDSSSGWTA-258 0.92 Antigen (0.602) Negative (1) |
| T146 | 262-328 | Sentence | denotes | 327-FPNITNLCPFGEVFNA-342 0.82 Antigen (0.606) Negative (−0.132) |
| T147 | 329-390 | Sentence | denotes | 404-EVIQIAPGQTGKIADY-419 0.86 Antigen (1.231) Negative (1) |
| T148 | 391-458 | Sentence | denotes | 413-TGKIADYNYKLPDDFT-428 0.84 Antigen (0.9642) Negative (−0.334) |
| T149 | 459-522 | Sentence | denotes | 1204-YEQYIKWPWYIWLGFI-1219 0.89 Antigen (0.951) Negative (1) |
| T150 | 523-624 | Sentence | denotes | Epitopes were predicted using a combination of the Bepipred server and the ABCpred prediction server. |
| T151 | 625-684 | Sentence | denotes | The antigenicity was predicted using the VaxiJen v2.0 tool. |