PMC:7258756 / 18641-19132 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"272","span":{"begin":105,"end":110},"obj":"Gene"},{"id":"277","span":{"begin":355,"end":360},"obj":"Gene"}],"attributes":[{"id":"A272","pred":"tao:has_database_id","subj":"272","obj":"Gene:3458"},{"id":"A277","pred":"tao:has_database_id","subj":"277","obj":"Gene:43740568"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":" one in the S2 domain, were predicted, which could possibly generate an immune response and suppress the IFN-γ response (Table II). N-linked glycosylation site prediction revealed that two putative glycosylation sites (with a low value for jury agreement) were present within the epitope stretch 328-344.\nTable II Linear B-cell epitopes predicted on the spike protein of the Indian severe acute respiratory syndrome coronavirus 2\nPeptide Epitope probability Vaxigen score Interferon (IFN"}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T96","span":{"begin":324,"end":328},"obj":"Body_part"},{"id":"T97","span":{"begin":361,"end":368},"obj":"Body_part"}],"attributes":[{"id":"A96","pred":"fma_id","subj":"T96","obj":"http://purl.org/sig/ont/fma/fma68646"},{"id":"A97","pred":"fma_id","subj":"T97","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":" one in the S2 domain, were predicted, which could possibly generate an immune response and suppress the IFN-γ response (Table II). N-linked glycosylation site prediction revealed that two putative glycosylation sites (with a low value for jury agreement) were present within the epitope stretch 328-344.\nTable II Linear B-cell epitopes predicted on the spike protein of the Indian severe acute respiratory syndrome coronavirus 2\nPeptide Epitope probability Vaxigen score Interferon (IFN"}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T151","span":{"begin":383,"end":430},"obj":"Disease"},{"id":"T152","span":{"begin":383,"end":416},"obj":"Disease"}],"attributes":[{"id":"A151","pred":"mondo_id","subj":"T151","obj":"http://purl.obolibrary.org/obo/MONDO_0100096"},{"id":"A152","pred":"mondo_id","subj":"T152","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":" one in the S2 domain, were predicted, which could possibly generate an immune response and suppress the IFN-γ response (Table II). N-linked glycosylation site prediction revealed that two putative glycosylation sites (with a low value for jury agreement) were present within the epitope stretch 328-344.\nTable II Linear B-cell epitopes predicted on the spike protein of the Indian severe acute respiratory syndrome coronavirus 2\nPeptide Epitope probability Vaxigen score Interferon (IFN"}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T126","span":{"begin":12,"end":14},"obj":"http://purl.obolibrary.org/obo/CLO_0008922"},{"id":"T127","span":{"begin":12,"end":14},"obj":"http://purl.obolibrary.org/obo/CLO_0050052"},{"id":"T128","span":{"begin":224,"end":225},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"},{"id":"T129","span":{"begin":322,"end":328},"obj":"http://purl.obolibrary.org/obo/CL_0000236"},{"id":"T130","span":{"begin":431,"end":438},"obj":"http://purl.obolibrary.org/obo/PR_000018263"}],"text":" one in the S2 domain, were predicted, which could possibly generate an immune response and suppress the IFN-γ response (Table II). N-linked glycosylation site prediction revealed that two putative glycosylation sites (with a low value for jury agreement) were present within the epitope stretch 328-344.\nTable II Linear B-cell epitopes predicted on the spike protein of the Indian severe acute respiratory syndrome coronavirus 2\nPeptide Epitope probability Vaxigen score Interferon (IFN"}

{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T93","span":{"begin":12,"end":14},"obj":"Chemical"},{"id":"T94","span":{"begin":127,"end":129},"obj":"Chemical"},{"id":"T95","span":{"begin":280,"end":287},"obj":"Chemical"},{"id":"T96","span":{"begin":311,"end":313},"obj":"Chemical"},{"id":"T97","span":{"begin":361,"end":368},"obj":"Chemical"},{"id":"T98","span":{"begin":431,"end":438},"obj":"Chemical"}],"attributes":[{"id":"A93","pred":"chebi_id","subj":"T93","obj":"http://purl.obolibrary.org/obo/CHEBI_29387"},{"id":"A94","pred":"chebi_id","subj":"T94","obj":"http://purl.obolibrary.org/obo/CHEBI_74067"},{"id":"A95","pred":"chebi_id","subj":"T95","obj":"http://purl.obolibrary.org/obo/CHEBI_53000"},{"id":"A96","pred":"chebi_id","subj":"T96","obj":"http://purl.obolibrary.org/obo/CHEBI_74067"},{"id":"A97","pred":"chebi_id","subj":"T97","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A98","pred":"chebi_id","subj":"T98","obj":"http://purl.obolibrary.org/obo/CHEBI_16670"}],"text":" one in the S2 domain, were predicted, which could possibly generate an immune response and suppress the IFN-γ response (Table II). N-linked glycosylation site prediction revealed that two putative glycosylation sites (with a low value for jury agreement) were present within the epitope stretch 328-344.\nTable II Linear B-cell epitopes predicted on the spike protein of the Indian severe acute respiratory syndrome coronavirus 2\nPeptide Epitope probability Vaxigen score Interferon (IFN"}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T19","span":{"begin":72,"end":87},"obj":"http://purl.obolibrary.org/obo/GO_0006955"},{"id":"T20","span":{"begin":132,"end":154},"obj":"http://purl.obolibrary.org/obo/GO_0006487"},{"id":"T21","span":{"begin":141,"end":154},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T22","span":{"begin":198,"end":211},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":" one in the S2 domain, were predicted, which could possibly generate an immune response and suppress the IFN-γ response (Table II). N-linked glycosylation site prediction revealed that two putative glycosylation sites (with a low value for jury agreement) were present within the epitope stretch 328-344.\nTable II Linear B-cell epitopes predicted on the spike protein of the Indian severe acute respiratory syndrome coronavirus 2\nPeptide Epitope probability Vaxigen score Interferon (IFN"}

{"project":"LitCovid-sentences","denotations":[{"id":"T142","span":{"begin":132,"end":304},"obj":"Sentence"},{"id":"T143","span":{"begin":305,"end":430},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":" one in the S2 domain, were predicted, which could possibly generate an immune response and suppress the IFN-γ response (Table II). N-linked glycosylation site prediction revealed that two putative glycosylation sites (with a low value for jury agreement) were present within the epitope stretch 328-344.\nTable II Linear B-cell epitopes predicted on the spike protein of the Indian severe acute respiratory syndrome coronavirus 2\nPeptide Epitope probability Vaxigen score Interferon (IFN"}