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PMC:7258756 / 15492-16120 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
228 461-465 Gene denotes Hu-1 Gene:6195
229 20-30 Species denotes SARS-CoV-2 Tax:2697049
230 476-486 Species denotes SARS-CoV-2 Tax:2697049
231 438-447 Disease denotes pneumonia MESH:D011014

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T77 156-162 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T78 487-493 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116
T79 587-593 Body_part denotes genome http://purl.org/sig/ont/fma/fma84116

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T122 20-28 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T123 20-24 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T124 120-122 Disease denotes TS http://purl.obolibrary.org/obo/MONDO_0010979|http://purl.obolibrary.org/obo/MONDO_0016455
T126 438-447 Disease denotes pneumonia http://purl.obolibrary.org/obo/MONDO_0005249
T127 476-484 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T128 476-480 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T110 448-453 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T68 120-122 Chemical denotes TS http://purl.obolibrary.org/obo/CHEBI_73664

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T119 13-196 Sentence denotes NGS of SARS-CoV-2 from India - Phylogenetic analysis and molecular characterization: NGS analysis from the TS specimens retrieved two complete genome sequences from case 1 and case 3.
T120 197-366 Sentence denotes The complete genomic sequence data for case 2 could not be recovered due to the lower kappa concentration of the sample and hence not included in the study for analysis.
T121 367-526 Sentence denotes The FastQ files were reference mapped with the available Wuhan seafood pneumonia virus (Wuhan Hu-1) complete SARS-CoV-2 genome (accession number: NC 045512.2).

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T9 438-447 Phenotype denotes pneumonia http://purl.obolibrary.org/obo/HP_0002090