PMC:7258756 / 14116-14568 JSONTXT

{"project":"LitCovid-PubTator","denotations":[{"id":"201","span":{"begin":71,"end":81},"obj":"Species"}],"attributes":[{"id":"A201","pred":"tao:has_database_id","subj":"201","obj":"Tax:2697049"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"Positive cases Ct values for real-time RT-PCR for the confirmation of SARS-CoV-2 Relevant reads Total reads Genome length recovered (bp) Per cent genome coverage\nRdRp (1) RdRp (2) E gene N gene Rnase P internal control\nCase 1 33.33 27.93 34.5 33.90 Positive 20,096 5,615,846 29,854 99.83\nCase 2 24.6 29 19.8 38 Positive 610 8,587,146 16,047 53.66\nCase 3 34.17 32.64 28.98 36.35 Positive 11,296 1,405,038 29,851 99.83"}

{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T71","span":{"begin":112,"end":118},"obj":"Body_part"},{"id":"T72","span":{"begin":151,"end":157},"obj":"Body_part"},{"id":"T73","span":{"begin":189,"end":193},"obj":"Body_part"},{"id":"T74","span":{"begin":197,"end":201},"obj":"Body_part"}],"attributes":[{"id":"A71","pred":"fma_id","subj":"T71","obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"A72","pred":"fma_id","subj":"T72","obj":"http://purl.org/sig/ont/fma/fma84116"},{"id":"A73","pred":"fma_id","subj":"T73","obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"A74","pred":"fma_id","subj":"T74","obj":"http://purl.org/sig/ont/fma/fma74402"}],"text":"Positive cases Ct values for real-time RT-PCR for the confirmation of SARS-CoV-2 Relevant reads Total reads Genome length recovered (bp) Per cent genome coverage\nRdRp (1) RdRp (2) E gene N gene Rnase P internal control\nCase 1 33.33 27.93 34.5 33.90 Positive 20,096 5,615,846 29,854 99.83\nCase 2 24.6 29 19.8 38 Positive 610 8,587,146 16,047 53.66\nCase 3 34.17 32.64 28.98 36.35 Positive 11,296 1,405,038 29,851 99.83"}

{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T111","span":{"begin":71,"end":79},"obj":"Disease"},{"id":"T112","span":{"begin":71,"end":75},"obj":"Disease"}],"attributes":[{"id":"A111","pred":"mondo_id","subj":"T111","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A112","pred":"mondo_id","subj":"T112","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"Positive cases Ct values for real-time RT-PCR for the confirmation of SARS-CoV-2 Relevant reads Total reads Genome length recovered (bp) Per cent genome coverage\nRdRp (1) RdRp (2) E gene N gene Rnase P internal control\nCase 1 33.33 27.93 34.5 33.90 Positive 20,096 5,615,846 29,854 99.83\nCase 2 24.6 29 19.8 38 Positive 610 8,587,146 16,047 53.66\nCase 3 34.17 32.64 28.98 36.35 Positive 11,296 1,405,038 29,851 99.83"}

{"project":"LitCovid-PD-CLO","denotations":[{"id":"T103","span":{"begin":142,"end":145},"obj":"http://purl.obolibrary.org/obo/CLO_0008190"},{"id":"T104","span":{"begin":189,"end":193},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T105","span":{"begin":197,"end":201},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"}],"text":"Positive cases Ct values for real-time RT-PCR for the confirmation of SARS-CoV-2 Relevant reads Total reads Genome length recovered (bp) Per cent genome coverage\nRdRp (1) RdRp (2) E gene N gene Rnase P internal control\nCase 1 33.33 27.93 34.5 33.90 Positive 20,096 5,615,846 29,854 99.83\nCase 2 24.6 29 19.8 38 Positive 610 8,587,146 16,047 53.66\nCase 3 34.17 32.64 28.98 36.35 Positive 11,296 1,405,038 29,851 99.83"}

{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T18","span":{"begin":203,"end":210},"obj":"http://purl.obolibrary.org/obo/GO_0004526"}],"text":"Positive cases Ct values for real-time RT-PCR for the confirmation of SARS-CoV-2 Relevant reads Total reads Genome length recovered (bp) Per cent genome coverage\nRdRp (1) RdRp (2) E gene N gene Rnase P internal control\nCase 1 33.33 27.93 34.5 33.90 Positive 20,096 5,615,846 29,854 99.83\nCase 2 24.6 29 19.8 38 Positive 610 8,587,146 16,047 53.66\nCase 3 34.17 32.64 28.98 36.35 Positive 11,296 1,405,038 29,851 99.83"}

{"project":"LitCovid-sentences","denotations":[{"id":"T107","span":{"begin":0,"end":166},"obj":"Sentence"},{"id":"T108","span":{"begin":167,"end":227},"obj":"Sentence"},{"id":"T109","span":{"begin":228,"end":305},"obj":"Sentence"},{"id":"T110","span":{"begin":306,"end":373},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"Positive cases Ct values for real-time RT-PCR for the confirmation of SARS-CoV-2 Relevant reads Total reads Genome length recovered (bp) Per cent genome coverage\nRdRp (1) RdRp (2) E gene N gene Rnase P internal control\nCase 1 33.33 27.93 34.5 33.90 Positive 20,096 5,615,846 29,854 99.83\nCase 2 24.6 29 19.8 38 Positive 610 8,587,146 16,047 53.66\nCase 3 34.17 32.64 28.98 36.35 Positive 11,296 1,405,038 29,851 99.83"}