
PMC:7258756 / 13355-13853
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/7258756","sourcedb":"PMC","sourceid":"7258756","source_url":"https://www.ncbi.nlm.nih.gov/pmc/7258756","text":"Detection of SARS-CoV-2 in suspected samples: Three of the 881 TS/nasal swab (NS) specimens from the suspected cases, tested positive for the SARS-CoV-2 using the real-time RT-PCR specific to E gene, RdRp (1), RdRp (2) and N gene. The Ct value of the E gene ranged from 19.8 to 34.5 for the TS/NS specimens. Detailed Ct values for the real-time RT-PCRs specific to the above-mentioned genes of the positive specimens are given in Table I. Blood samples were found to be negative for the SARS-CoV-2.","tracks":[{"project":"LitCovid-PubTator","denotations":[{"id":"192","span":{"begin":200,"end":204},"obj":"Gene"},{"id":"193","span":{"begin":210,"end":214},"obj":"Gene"},{"id":"194","span":{"begin":223,"end":224},"obj":"Gene"},{"id":"195","span":{"begin":192,"end":193},"obj":"Gene"},{"id":"196","span":{"begin":251,"end":252},"obj":"Gene"},{"id":"197","span":{"begin":13,"end":23},"obj":"Species"},{"id":"198","span":{"begin":142,"end":152},"obj":"Species"},{"id":"199","span":{"begin":487,"end":497},"obj":"Species"}],"attributes":[{"id":"A192","pred":"tao:has_database_id","subj":"192","obj":"Gene:43740578"},{"id":"A193","pred":"tao:has_database_id","subj":"193","obj":"Gene:43740578"},{"id":"A194","pred":"tao:has_database_id","subj":"194","obj":"Gene:43740575"},{"id":"A195","pred":"tao:has_database_id","subj":"195","obj":"Gene:43740570"},{"id":"A196","pred":"tao:has_database_id","subj":"196","obj":"Gene:43740570"},{"id":"A197","pred":"tao:has_database_id","subj":"197","obj":"Tax:2697049"},{"id":"A198","pred":"tao:has_database_id","subj":"198","obj":"Tax:2697049"},{"id":"A199","pred":"tao:has_database_id","subj":"199","obj":"Tax:2697049"},{"subj":"192","pred":"source","obj":"LitCovid-PubTator"},{"subj":"193","pred":"source","obj":"LitCovid-PubTator"},{"subj":"194","pred":"source","obj":"LitCovid-PubTator"},{"subj":"195","pred":"source","obj":"LitCovid-PubTator"},{"subj":"196","pred":"source","obj":"LitCovid-PubTator"},{"subj":"197","pred":"source","obj":"LitCovid-PubTator"},{"subj":"198","pred":"source","obj":"LitCovid-PubTator"},{"subj":"199","pred":"source","obj":"LitCovid-PubTator"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}]},{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T64","span":{"begin":194,"end":198},"obj":"Body_part"},{"id":"T65","span":{"begin":225,"end":229},"obj":"Body_part"},{"id":"T66","span":{"begin":253,"end":257},"obj":"Body_part"},{"id":"T67","span":{"begin":439,"end":444},"obj":"Body_part"}],"attributes":[{"id":"A64","pred":"fma_id","subj":"T64","obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"A65","pred":"fma_id","subj":"T65","obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"A66","pred":"fma_id","subj":"T66","obj":"http://purl.org/sig/ont/fma/fma74402"},{"id":"A67","pred":"fma_id","subj":"T67","obj":"http://purl.org/sig/ont/fma/fma9670"},{"subj":"T64","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T65","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T66","pred":"source","obj":"LitCovid-PD-FMA-UBERON"},{"subj":"T67","pred":"source","obj":"LitCovid-PD-FMA-UBERON"}]},{"project":"LitCovid-PD-UBERON","denotations":[{"id":"T4","span":{"begin":439,"end":444},"obj":"Body_part"}],"attributes":[{"id":"A4","pred":"uberon_id","subj":"T4","obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"subj":"T4","pred":"source","obj":"LitCovid-PD-UBERON"}]},{"project":"LitCovid-PD-MONDO","denotations":[{"id":"T95","span":{"begin":13,"end":21},"obj":"Disease"},{"id":"T96","span":{"begin":13,"end":17},"obj":"Disease"},{"id":"T97","span":{"begin":63,"end":65},"obj":"Disease"},{"id":"T99","span":{"begin":78,"end":80},"obj":"Disease"},{"id":"T100","span":{"begin":142,"end":150},"obj":"Disease"},{"id":"T101","span":{"begin":142,"end":146},"obj":"Disease"},{"id":"T102","span":{"begin":291,"end":293},"obj":"Disease"},{"id":"T104","span":{"begin":294,"end":296},"obj":"Disease"},{"id":"T105","span":{"begin":487,"end":495},"obj":"Disease"},{"id":"T106","span":{"begin":487,"end":491},"obj":"Disease"}],"attributes":[{"id":"A95","pred":"mondo_id","subj":"T95","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A96","pred":"mondo_id","subj":"T96","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A97","pred":"mondo_id","subj":"T97","obj":"http://purl.obolibrary.org/obo/MONDO_0010979"},{"id":"A98","pred":"mondo_id","subj":"T97","obj":"http://purl.obolibrary.org/obo/MONDO_0016455"},{"id":"A99","pred":"mondo_id","subj":"T99","obj":"http://purl.obolibrary.org/obo/MONDO_0009735"},{"id":"A100","pred":"mondo_id","subj":"T100","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A101","pred":"mondo_id","subj":"T101","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A102","pred":"mondo_id","subj":"T102","obj":"http://purl.obolibrary.org/obo/MONDO_0010979"},{"id":"A103","pred":"mondo_id","subj":"T102","obj":"http://purl.obolibrary.org/obo/MONDO_0016455"},{"id":"A104","pred":"mondo_id","subj":"T104","obj":"http://purl.obolibrary.org/obo/MONDO_0009735"},{"id":"A105","pred":"mondo_id","subj":"T105","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"id":"A106","pred":"mondo_id","subj":"T106","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"},{"subj":"T95","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T96","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T97","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T99","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T100","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T101","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T102","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T104","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T105","pred":"source","obj":"LitCovid-PD-MONDO"},{"subj":"T106","pred":"source","obj":"LitCovid-PD-MONDO"}]},{"project":"LitCovid-PD-CLO","denotations":[{"id":"T94","span":{"begin":118,"end":124},"obj":"http://purl.obolibrary.org/obo/UBERON_0000473"},{"id":"T95","span":{"begin":194,"end":198},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T96","span":{"begin":225,"end":229},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T97","span":{"begin":253,"end":257},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T98","span":{"begin":385,"end":390},"obj":"http://purl.obolibrary.org/obo/OGG_0000000002"},{"id":"T99","span":{"begin":439,"end":444},"obj":"http://purl.obolibrary.org/obo/UBERON_0000178"},{"id":"T100","span":{"begin":439,"end":444},"obj":"http://www.ebi.ac.uk/efo/EFO_0000296"}],"attributes":[{"subj":"T94","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T95","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T96","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T97","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T98","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T99","pred":"source","obj":"LitCovid-PD-CLO"},{"subj":"T100","pred":"source","obj":"LitCovid-PD-CLO"}]},{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T61","span":{"begin":63,"end":65},"obj":"Chemical"},{"id":"T62","span":{"begin":78,"end":80},"obj":"Chemical"},{"id":"T63","span":{"begin":291,"end":293},"obj":"Chemical"},{"id":"T64","span":{"begin":294,"end":296},"obj":"Chemical"}],"attributes":[{"id":"A61","pred":"chebi_id","subj":"T61","obj":"http://purl.obolibrary.org/obo/CHEBI_73664"},{"id":"A62","pred":"chebi_id","subj":"T62","obj":"http://purl.obolibrary.org/obo/CHEBI_73426"},{"id":"A63","pred":"chebi_id","subj":"T63","obj":"http://purl.obolibrary.org/obo/CHEBI_73664"},{"id":"A64","pred":"chebi_id","subj":"T64","obj":"http://purl.obolibrary.org/obo/CHEBI_73426"},{"subj":"T61","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T62","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T63","pred":"source","obj":"LitCovid-PD-CHEBI"},{"subj":"T64","pred":"source","obj":"LitCovid-PD-CHEBI"}]},{"project":"LitCovid-sentences","denotations":[{"id":"T101","span":{"begin":0,"end":45},"obj":"Sentence"},{"id":"T102","span":{"begin":46,"end":230},"obj":"Sentence"},{"id":"T103","span":{"begin":231,"end":307},"obj":"Sentence"},{"id":"T104","span":{"begin":308,"end":438},"obj":"Sentence"},{"id":"T105","span":{"begin":439,"end":498},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"attributes":[{"subj":"T101","pred":"source","obj":"LitCovid-sentences"},{"subj":"T102","pred":"source","obj":"LitCovid-sentences"},{"subj":"T103","pred":"source","obj":"LitCovid-sentences"},{"subj":"T104","pred":"source","obj":"LitCovid-sentences"},{"subj":"T105","pred":"source","obj":"LitCovid-sentences"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"LitCovid-PubTator","color":"#ec93bc","default":true},{"id":"LitCovid-PD-FMA-UBERON","color":"#93d6ec"},{"id":"LitCovid-PD-UBERON","color":"#ece893"},{"id":"LitCovid-PD-MONDO","color":"#cd93ec"},{"id":"LitCovid-PD-CLO","color":"#93ecb3"},{"id":"LitCovid-PD-CHEBI","color":"#ec9993"},{"id":"LitCovid-sentences","color":"#93a6ec"}]}]}}