PMC:7258756 / 1050-1541
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 25 | 351-356 | Gene | denotes | spike | Gene:43740568 |
| 27 | 45-55 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
| 28 | 113-149 | Species | denotes | Wuhan seafood market pneumonia virus | Tax:2697049 |
| 29 | 485-490 | Species | denotes | human | Tax:9606 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T9 | 287-291 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
| T10 | 357-364 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T11 | 458-462 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-MONDO
| Id | Subject | Object | Predicate | Lexical cue | mondo_id |
|---|---|---|---|---|---|
| T15 | 45-53 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T16 | 45-49 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
| T17 | 134-143 | Disease | denotes | pneumonia | http://purl.obolibrary.org/obo/MONDO_0005249 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12 | 144-149 | http://purl.obolibrary.org/obo/NCBITaxon_10239 | denotes | virus |
| T13 | 285-291 | http://purl.obolibrary.org/obo/CL_0000236 | denotes | B-cell |
| T14 | 338-340 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
| T15 | 370-371 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T16 | 456-462 | http://purl.obolibrary.org/obo/CL_0000084 | denotes | T-cell |
| T17 | 485-490 | http://purl.obolibrary.org/obo/NCBITaxon_9606 | denotes | human |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T2 | 357-364 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T3 | 387-394 | Chemical | denotes | epitope | http://purl.obolibrary.org/obo/CHEBI_53000 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13 | 21-180 | Sentence | denotes | The sequences of Indian SARS-CoV-2 though not identical showed high (~99.98%) identity with Wuhan seafood market pneumonia virus (accession number: NC 045512). |
| T14 | 181-267 | Sentence | denotes | Phylogenetic analysis showed that the Indian sequences belonged to different clusters. |
| T15 | 268-441 | Sentence | denotes | Predicted linear B-cell epitopes were found to be concentrated in the S1 domain of spike protein, and a conformational epitope was identified in the receptor-binding domain. |
LitCovid-PD-HP
| Id | Subject | Object | Predicate | Lexical cue | hp_id |
|---|---|---|---|---|---|
| T1 | 134-143 | Phenotype | denotes | pneumonia | http://purl.obolibrary.org/obo/HP_0002090 |