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PMC:7253482 / 9708-9888 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
464 19-31 Chemical denotes oligomannose
465 37-44 Chemical denotes glycans MESH:D011134
466 132-139 Chemical denotes glycans MESH:D011134
467 143-149 Chemical denotes Asn155
468 151-157 Chemical denotes Asn166
469 163-169 Chemical denotes Asn236
482 48-52 Disease denotes MERS MESH:D018352

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T60 95-99 Body_part denotes head http://purl.org/sig/ont/fma/fma7154
T61 109-116 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 95-99 Body_part denotes head http://purl.obolibrary.org/obo/UBERON_0000033

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T58 95-99 http://purl.obolibrary.org/obo/UBERON_0000033 denotes head
T59 95-99 http://www.ebi.ac.uk/efo/EFO_0000964 denotes head

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T102 37-44 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T103 109-116 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T104 132-139 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T91445 0-4 DT denotes This
T32785 5-13 VBD denotes revealed
T90326 14-18 IN denotes that
T49774 19-36 JJ denotes oligomannose-type
T77922 37-44 NNS denotes glycans
T26521 45-47 IN denotes on
T6952 48-52 NNS denotes MERS
T82084 53-54 NN denotes S
T36749 55-66 VBP denotes co-localize
T66900 67-69 TO denotes to
T31749 70-78 JJ denotes specific
T40780 79-87 NNS denotes clusters
T42499 88-90 IN denotes on
T28913 91-94 DT denotes the
T99242 95-99 NN denotes head
T67844 100-102 IN denotes of
T51016 103-106 DT denotes the
T78718 107-108 NN denotes S
T82870 109-116 NN denotes protein
T5951 116-117 -COMMA- denotes ,
T72350 118-128 VBG denotes consisting
T71605 129-131 IN denotes of
T54609 132-139 NNS denotes glycans
T31759 140-142 IN denotes at
T18955 143-149 NN denotes Asn155
T13208 149-150 -COMMA- denotes ,
T79227 151-157 NN denotes Asn166
T49578 157-158 -COMMA- denotes ,
T66915 159-162 CC denotes and
T34772 163-169 NN denotes Asn236
T34488 170-171 -LRB- denotes (
T13786 171-178 NN denotes Fig. 3a
T99953 178-179 -RRB- denotes )
R10349 T91445 T32785 arg1Of This,revealed
R21926 T36749 T32785 arg2Of co-localize,revealed
R19622 T36749 T90326 arg1Of co-localize,that
R31615 T77922 T49774 arg1Of glycans,oligomannose-type
R55949 T77922 T26521 arg1Of glycans,on
R87012 T82084 T26521 arg2Of S,on
R45016 T82084 T6952 arg1Of S,MERS
R31141 T77922 T36749 arg1Of glycans,co-localize
R23288 T36749 T66900 arg1Of co-localize,to
R65669 T40780 T66900 arg2Of clusters,to
R28008 T40780 T31749 arg1Of clusters,specific
R90105 T40780 T42499 arg1Of clusters,on
R17876 T99242 T42499 arg2Of head,on
R50668 T99242 T28913 arg1Of head,the
R59810 T99242 T67844 arg1Of head,of
R71622 T82870 T67844 arg2Of protein,of
R58277 T82870 T51016 arg1Of protein,the
R35082 T82870 T78718 arg1Of protein,S
R23230 T36749 T5951 arg1Of co-localize,","
R33056 T77922 T72350 arg1Of glycans,consisting
R24535 T36749 T72350 modOf co-localize,consisting
R96209 T72350 T71605 arg1Of consisting,of
R24690 T54609 T71605 arg2Of glycans,of
R71539 T54609 T31759 arg1Of glycans,at
R71285 T66915 T31759 arg2Of and,at
R10987 T18955 T13208 arg1Of Asn155,","
R35754 T79227 T13208 arg2Of Asn166,","
R58997 T66915 T49578 arg1Of and,","
R88211 T13208 T66915 arg1Of ",",and
R50155 T34772 T66915 arg2Of Asn236,and
R67033 T66915 T34488 arg1Of and,(
R69629 T13786 T34488 arg2Of Fig. 3a,(
R92165 T99953 T34488 arg3Of ),(

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T60 95-99 Body_part denotes head http://purl.org/sig/ont/fma/fma7154
T61 109-116 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T81 37-44 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T82 109-116 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T83 132-139 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T65 48-52 Species denotes MERS NCBItxid:1335626

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T56 0-180 Sentence denotes This revealed that oligomannose-type glycans on MERS S co-localize to specific clusters on the head of the S protein, consisting of glycans at Asn155, Asn166, and Asn236 (Fig. 3a).

LitCovid-sample-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T3 95-99 Body_part denotes head http://purl.obolibrary.org/obo/UBERON_0000033

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
464 19-31 Chemical denotes oligomannose
465 37-44 Chemical denotes glycans MESH:D011134
482 48-52 Disease denotes MERS MESH:D018352
466 132-139 Chemical denotes glycans MESH:D011134
467 143-149 Chemical denotes Asn155
468 151-157 Chemical denotes Asn166
469 163-169 Chemical denotes Asn236

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T2686 107-116 Protein denotes S protein https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9

LitCovid-sample-PD-MAT

Id Subject Object Predicate Lexical cue
T1 95-99 http://purl.obolibrary.org/obo/MAT_0000294 denotes head

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T56 0-180 Sentence denotes This revealed that oligomannose-type glycans on MERS S co-localize to specific clusters on the head of the S protein, consisting of glycans at Asn155, Asn166, and Asn236 (Fig. 3a).