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PMC:7253482 / 9158-9374 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
455 20-31 Species denotes recombinant Tax:575864
460 121-134 Chemical denotes glycopeptides MESH:D006020
479 0-4 Disease denotes MERS MESH:D018352
480 6-10 Disease denotes SARS MESH:D045169

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T57 34-42 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T58 121-134 Body_part denotes glycopeptides http://purl.org/sig/ont/fma/fma82784

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T34 6-10 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T53 209-211 http://purl.obolibrary.org/obo/CL_0000453 denotes LC
T54 212-214 http://purl.obolibrary.org/obo/CLO_0007874 denotes MS

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T96 34-42 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T97 121-134 Chemical denotes glycopeptides http://purl.obolibrary.org/obo/CHEBI_24396
T98 209-211 Chemical denotes LC http://purl.obolibrary.org/obo/CHEBI_73582
T99 212-214 Chemical denotes MS http://purl.obolibrary.org/obo/CHEBI_73613

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T78780 0-4 NNS denotes MERS
T54967 4-5 -COMMA- denotes ,
T43119 6-10 NN denotes SARS
T79243 11-14 CC denotes and
T12013 15-19 NN denotes HKU1
T9774 20-31 JJ denotes recombinant
T20303 32-33 NN denotes S
T31427 34-42 NNS denotes proteins
T76296 43-47 VBD denotes were
T47095 48-55 VBN denotes reduced
T76573 55-56 -COMMA- denotes ,
T86504 57-66 VBN denotes alkylated
T10460 67-70 CC denotes and
T8652 71-79 VBN denotes digested
T27352 80-84 IN denotes with
T80310 85-87 DT denotes an
T76651 88-98 NN denotes assortment
T63553 99-101 IN denotes of
T52033 102-111 NNS denotes proteases
T24947 112-114 TO denotes to
T50688 115-120 VB denotes yield
T80082 121-134 NNS denotes glycopeptides
T99831 134-135 -COMMA- denotes ,
T33781 136-141 WDT denotes which
T20638 142-146 VBD denotes were
T35120 147-156 VBN denotes subjected
T25962 157-159 TO denotes to
T78058 160-167 JJ denotes in-line
T75900 168-174 JJ denotes liquid
T31589 175-194 NN denotes chromatography-mass
T18666 195-207 NN denotes spectrometry
T45711 208-209 -LRB- denotes (
T15066 209-214 NN denotes LC-MS
T82375 214-215 -RRB- denotes )
R8290 T10460 T78780 arg1Of and,MERS
R17294 T10460 T54967 arg1Of and,","
R86174 T31427 T43119 arg1Of proteins,SARS
R12180 T43119 T79243 arg1Of SARS,and
R39712 T12013 T79243 arg2Of HKU1,and
R11142 T31427 T12013 arg1Of proteins,HKU1
R10158 T31427 T9774 arg1Of proteins,recombinant
R41625 T31427 T20303 arg1Of proteins,S
R83158 T31427 T76296 arg1Of proteins,were
R20431 T10460 T76296 arg2Of and,were
R61408 T31427 T47095 arg2Of proteins,reduced
R29152 T47095 T76573 arg1Of reduced,","
R1577 T86504 T76573 arg2Of alkylated,","
R4827 T31427 T86504 arg2Of proteins,alkylated
R52010 T76573 T10460 arg1Of ",",and
R2728 T8652 T10460 arg2Of digested,and
R48682 T31427 T8652 arg2Of proteins,digested
R89372 T8652 T27352 arg1Of digested,with
R91250 T76651 T27352 arg2Of assortment,with
R22864 T76651 T80310 arg1Of assortment,an
R75613 T76651 T63553 arg1Of assortment,of
R66605 T52033 T63553 arg2Of proteases,of
R13388 T50688 T24947 arg1Of yield,to
R41585 T76651 T24947 modOf assortment,to
R10360 T80082 T50688 arg2Of glycopeptides,yield
R94669 T80082 T99831 arg1Of glycopeptides,","
R79677 T80082 T33781 arg1Of glycopeptides,which
R6444 T80082 T20638 arg1Of glycopeptides,were
R89979 T35120 T20638 arg2Of subjected,were
R57229 T80082 T35120 arg2Of glycopeptides,subjected
R24648 T35120 T25962 arg1Of subjected,to
R18961 T18666 T25962 arg2Of spectrometry,to
R95719 T18666 T78058 arg1Of spectrometry,in-line
R50127 T18666 T75900 arg1Of spectrometry,liquid
R57330 T18666 T31589 arg1Of spectrometry,chromatography-mass
R72485 T18666 T45711 arg1Of spectrometry,(
R24547 T15066 T45711 arg2Of LC-MS,(
R43983 T82375 T45711 arg3Of ),(

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T57 34-42 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T58 121-134 Body_part denotes glycopeptides http://purl.org/sig/ont/fma/fma82784

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T78 34-42 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T79 121-134 Chemical denotes glycopeptides http://purl.obolibrary.org/obo/CHEBI_24396

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T61 0-4 Species denotes MERS NCBItxid:1335626
T62 6-10 Species denotes SARS NCBItxid:694009

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T52 0-216 Sentence denotes MERS, SARS and HKU1 recombinant S proteins were reduced, alkylated and digested with an assortment of proteases to yield glycopeptides, which were subjected to in-line liquid chromatography-mass spectrometry (LC-MS).

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T31 6-10 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
479 0-4 Disease denotes MERS MESH:D018352
480 6-10 Disease denotes SARS MESH:D045169
455 20-31 Species denotes recombinant Tax:575864
460 121-134 Chemical denotes glycopeptides MESH:D006020

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T2620 32-42 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T52 0-216 Sentence denotes MERS, SARS and HKU1 recombinant S proteins were reduced, alkylated and digested with an assortment of proteases to yield glycopeptides, which were subjected to in-line liquid chromatography-mass spectrometry (LC-MS).