PMC:7253482 / 910-1255
Annnotations
LitCovid-PubTator
{"project":"LitCovid-PubTator","denotations":[{"id":"38","span":{"begin":169,"end":175},"obj":"Chemical"},{"id":"50","span":{"begin":331,"end":336},"obj":"Gene"}],"attributes":[{"id":"A38","pred":"tao:has_database_id","subj":"38","obj":"MESH:D011134"},{"id":"A50","pred":"tao:has_database_id","subj":"50","obj":"Gene:43740568"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"wn role in shielding immunogenic epitopes. Overall, our data reveal how organisation of glycosylation across class I viral fusion proteins influence not only individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) prot"}
LitCovid-PD-FMA-UBERON
{"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T6","span":{"begin":130,"end":138},"obj":"Body_part"},{"id":"T7","span":{"begin":236,"end":243},"obj":"Body_part"}],"attributes":[{"id":"A6","pred":"fma_id","subj":"T6","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A7","pred":"fma_id","subj":"T7","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"wn role in shielding immunogenic epitopes. Overall, our data reveal how organisation of glycosylation across class I viral fusion proteins influence not only individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) prot"}
LitCovid-PD-CLO
{"project":"LitCovid-PD-CLO","denotations":[{"id":"T6","span":{"begin":72,"end":84},"obj":"http://purl.obolibrary.org/obo/OBI_0000245"},{"id":"T7","span":{"begin":274,"end":275},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"wn role in shielding immunogenic epitopes. Overall, our data reveal how organisation of glycosylation across class I viral fusion proteins influence not only individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) prot"}
LitCovid-PD-CHEBI
{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T5","span":{"begin":130,"end":138},"obj":"Chemical"},{"id":"T6","span":{"begin":236,"end":243},"obj":"Chemical"}],"attributes":[{"id":"A5","pred":"chebi_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A6","pred":"chebi_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"wn role in shielding immunogenic epitopes. Overall, our data reveal how organisation of glycosylation across class I viral fusion proteins influence not only individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) prot"}
LitCovid-sample-Enju
{"project":"LitCovid-sample-Enju","denotations":[{"id":"T140","span":{"begin":3,"end":7},"obj":"NN"},{"id":"T141","span":{"begin":8,"end":10},"obj":"IN"},{"id":"T142","span":{"begin":11,"end":20},"obj":"VBG"},{"id":"T143","span":{"begin":21,"end":32},"obj":"JJ"},{"id":"T144","span":{"begin":33,"end":41},"obj":"NNS"},{"id":"T145","span":{"begin":43,"end":50},"obj":"RB"},{"id":"T146","span":{"begin":50,"end":51},"obj":"-COMMA-"},{"id":"T147","span":{"begin":52,"end":55},"obj":"PRP-DOLLAR-"},{"id":"T148","span":{"begin":56,"end":60},"obj":"NNS"},{"id":"T149","span":{"begin":61,"end":67},"obj":"VBP"},{"id":"T150","span":{"begin":68,"end":71},"obj":"WRB"},{"id":"T151","span":{"begin":72,"end":84},"obj":"NN"},{"id":"T152","span":{"begin":85,"end":87},"obj":"IN"},{"id":"T153","span":{"begin":88,"end":101},"obj":"NN"},{"id":"T154","span":{"begin":102,"end":108},"obj":"IN"},{"id":"T155","span":{"begin":109,"end":114},"obj":"NN"},{"id":"T156","span":{"begin":115,"end":116},"obj":"CD"},{"id":"T157","span":{"begin":117,"end":122},"obj":"JJ"},{"id":"T158","span":{"begin":123,"end":129},"obj":"NN"},{"id":"T159","span":{"begin":130,"end":138},"obj":"NNS"},{"id":"T160","span":{"begin":139,"end":148},"obj":"VBP"},{"id":"T161","span":{"begin":149,"end":152},"obj":"RB"},{"id":"T162","span":{"begin":153,"end":157},"obj":"RB"},{"id":"T163","span":{"begin":158,"end":168},"obj":"JJ"},{"id":"T164","span":{"begin":169,"end":175},"obj":"NN"},{"id":"T165","span":{"begin":176,"end":188},"obj":"NNS"},{"id":"T166","span":{"begin":189,"end":192},"obj":"CC"},{"id":"T167","span":{"begin":193,"end":197},"obj":"RB"},{"id":"T168","span":{"begin":198,"end":201},"obj":"DT"},{"id":"T169","span":{"begin":202,"end":215},"obj":"JJ"},{"id":"T170","span":{"begin":216,"end":224},"obj":"NN"},{"id":"T171","span":{"begin":225,"end":231},"obj":"IN"},{"id":"T172","span":{"begin":232,"end":235},"obj":"DT"},{"id":"T173","span":{"begin":236,"end":243},"obj":"NN"},{"id":"T174","span":{"begin":244,"end":251},"obj":"NN"},{"id":"T175","span":{"begin":254,"end":267},"obj":"NN"},{"id":"T176","span":{"begin":268,"end":273},"obj":"VBZ"},{"id":"T177","span":{"begin":274,"end":275},"obj":"DT"},{"id":"T178","span":{"begin":276,"end":279},"obj":"JJ"},{"id":"T179","span":{"begin":280,"end":284},"obj":"NN"},{"id":"T180","span":{"begin":285,"end":287},"obj":"IN"},{"id":"T181","span":{"begin":288,"end":297},"obj":"NN"},{"id":"T182","span":{"begin":298,"end":300},"obj":"IN"},{"id":"T183","span":{"begin":301,"end":312},"obj":"JJ"},{"id":"T184","span":{"begin":313,"end":321},"obj":"NNS"},{"id":"T185","span":{"begin":322,"end":324},"obj":"IN"},{"id":"T186","span":{"begin":325,"end":330},"obj":"JJ"},{"id":"T187","span":{"begin":331,"end":336},"obj":"NN"},{"id":"T188","span":{"begin":337,"end":338},"obj":"-LRB-"},{"id":"T189","span":{"begin":338,"end":339},"obj":"NN"},{"id":"T190","span":{"begin":339,"end":340},"obj":"-RRB-"}],"relations":[{"id":"R138","pred":"arg2Of","subj":"T142","obj":"T141"},{"id":"R139","pred":"arg2Of","subj":"T144","obj":"T142"},{"id":"R140","pred":"arg1Of","subj":"T144","obj":"T143"},{"id":"R141","pred":"arg1Of","subj":"T149","obj":"T145"},{"id":"R142","pred":"arg1Of","subj":"T149","obj":"T146"},{"id":"R143","pred":"arg1Of","subj":"T148","obj":"T147"},{"id":"R144","pred":"arg1Of","subj":"T148","obj":"T149"},{"id":"R145","pred":"arg2Of","subj":"T166","obj":"T149"},{"id":"R146","pred":"arg1Of","subj":"T160","obj":"T150"},{"id":"R147","pred":"arg1Of","subj":"T151","obj":"T152"},{"id":"R148","pred":"arg2Of","subj":"T153","obj":"T152"},{"id":"R149","pred":"arg1Of","subj":"T151","obj":"T154"},{"id":"R150","pred":"arg2Of","subj":"T159","obj":"T154"},{"id":"R151","pred":"arg1Of","subj":"T159","obj":"T155"},{"id":"R152","pred":"arg1Of","subj":"T159","obj":"T156"},{"id":"R153","pred":"arg1Of","subj":"T159","obj":"T157"},{"id":"R154","pred":"arg1Of","subj":"T159","obj":"T158"},{"id":"R155","pred":"arg1Of","subj":"T151","obj":"T160"},{"id":"R156","pred":"arg2Of","subj":"T165","obj":"T160"},{"id":"R157","pred":"arg1Of","subj":"T162","obj":"T161"},{"id":"R158","pred":"arg1Of","subj":"T165","obj":"T162"},{"id":"R159","pred":"arg1Of","subj":"T165","obj":"T163"},{"id":"R160","pred":"arg1Of","subj":"T165","obj":"T164"},{"id":"R161","pred":"arg1Of","subj":"T150","obj":"T166"},{"id":"R162","pred":"arg2Of","subj":"T170","obj":"T166"},{"id":"R163","pred":"arg1Of","subj":"T166","obj":"T167"},{"id":"R164","pred":"arg1Of","subj":"T170","obj":"T168"},{"id":"R165","pred":"arg1Of","subj":"T170","obj":"T169"},{"id":"R166","pred":"arg1Of","subj":"T170","obj":"T171"},{"id":"R167","pred":"arg2Of","subj":"T174","obj":"T171"},{"id":"R168","pred":"arg1Of","subj":"T174","obj":"T172"},{"id":"R169","pred":"arg1Of","subj":"T174","obj":"T173"},{"id":"R170","pred":"arg1Of","subj":"T175","obj":"T176"},{"id":"R171","pred":"arg2Of","subj":"T179","obj":"T176"},{"id":"R172","pred":"arg1Of","subj":"T179","obj":"T177"},{"id":"R173","pred":"arg1Of","subj":"T179","obj":"T178"},{"id":"R174","pred":"arg1Of","subj":"T176","obj":"T180"},{"id":"R175","pred":"arg2Of","subj":"T181","obj":"T180"},{"id":"R176","pred":"arg1Of","subj":"T181","obj":"T182"},{"id":"R177","pred":"arg2Of","subj":"T184","obj":"T182"},{"id":"R178","pred":"arg1Of","subj":"T184","obj":"T183"},{"id":"R179","pred":"arg1Of","subj":"T181","obj":"T185"},{"id":"R181","pred":"arg1Of","subj":"T187","obj":"T186"},{"id":"R183","pred":"arg1Of","subj":"T187","obj":"T188"},{"id":"R184","pred":"arg2Of","subj":"T189","obj":"T188"},{"id":"R185","pred":"arg3Of","subj":"T190","obj":"T188"}],"text":"wn role in shielding immunogenic epitopes. Overall, our data reveal how organisation of glycosylation across class I viral fusion proteins influence not only individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) prot"}
LitCovid-sample-PD-FMA
{"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T6","span":{"begin":130,"end":138},"obj":"Body_part"},{"id":"T7","span":{"begin":236,"end":243},"obj":"Body_part"}],"attributes":[{"id":"A6","pred":"fma_id","subj":"T6","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A7","pred":"fma_id","subj":"T7","obj":"http://purl.org/sig/ont/fma/fma67257"}],"text":"wn role in shielding immunogenic epitopes. Overall, our data reveal how organisation of glycosylation across class I viral fusion proteins influence not only individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) prot"}
LitCovid-sample-CHEBI
{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T5","span":{"begin":130,"end":138},"obj":"Chemical"},{"id":"T6","span":{"begin":236,"end":243},"obj":"Chemical"}],"attributes":[{"id":"A5","pred":"chebi_id","subj":"T5","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"},{"id":"A6","pred":"chebi_id","subj":"T6","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"wn role in shielding immunogenic epitopes. Overall, our data reveal how organisation of glycosylation across class I viral fusion proteins influence not only individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) prot"}
LitCovid-sample-sentences
{"project":"LitCovid-sample-sentences","denotations":[{"id":"T8","span":{"begin":43,"end":252},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"wn role in shielding immunogenic epitopes. Overall, our data reveal how organisation of glycosylation across class I viral fusion proteins influence not only individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) prot"}
LitCovid-sample-Pubtator
{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"38","span":{"begin":169,"end":175},"obj":"Chemical"},{"id":"50","span":{"begin":331,"end":336},"obj":"Gene"}],"attributes":[{"id":"A38","pred":"pubann:denotes","subj":"38","obj":"MESH:D011134"},{"id":"A50","pred":"pubann:denotes","subj":"50","obj":"Gene:43740568"}],"text":"wn role in shielding immunogenic epitopes. Overall, our data reveal how organisation of glycosylation across class I viral fusion proteins influence not only individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) prot"}
LitCovid-sample-PD-GO-BP-0
{"project":"LitCovid-sample-PD-GO-BP-0","denotations":[{"id":"T7","span":{"begin":88,"end":101},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T8","span":{"begin":254,"end":267},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":"wn role in shielding immunogenic epitopes. Overall, our data reveal how organisation of glycosylation across class I viral fusion proteins influence not only individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) prot"}
LitCovid-sample-GO-BP
{"project":"LitCovid-sample-GO-BP","denotations":[{"id":"T7","span":{"begin":88,"end":101},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T8","span":{"begin":254,"end":267},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":"wn role in shielding immunogenic epitopes. Overall, our data reveal how organisation of glycosylation across class I viral fusion proteins influence not only individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) prot"}
LitCovid-PD-GO-BP
{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T8","span":{"begin":88,"end":101},"obj":"http://purl.obolibrary.org/obo/GO_0070085"},{"id":"T9","span":{"begin":254,"end":267},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":"wn role in shielding immunogenic epitopes. Overall, our data reveal how organisation of glycosylation across class I viral fusion proteins influence not only individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) prot"}
LitCovid-sentences
{"project":"LitCovid-sentences","denotations":[{"id":"T8","span":{"begin":43,"end":252},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"wn role in shielding immunogenic epitopes. Overall, our data reveal how organisation of glycosylation across class I viral fusion proteins influence not only individual glycan compositions but also the immunological pressure across the protein surface.\n\nGlycosylation plays a key role in shielding of immunogenic epitopes on viral spike (S) prot"}