PMC:7253482 / 8421-8641
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
308 | 78-89 | Species | denotes | coronavirus | Tax:11118 |
310 | 39-55 | Chemical | denotes | N-linked glycans | |
311 | 57-63 | Chemical | denotes | glycan | MESH:D011134 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T55 | 92-99 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T49 | 186-188 | http://purl.obolibrary.org/obo/UBERON_0003064 | denotes | IM |
T50 | 193-195 | http://purl.obolibrary.org/obo/CLO_0007874 | denotes | MS |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T83 | 48-55 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
T84 | 92-99 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T85 | 126-129 | Chemical | denotes | ion | http://purl.obolibrary.org/obo/CHEBI_24870 |
T86 | 130-133 | Chemical | denotes | ion | http://purl.obolibrary.org/obo/CHEBI_24870 |
T87 | 186-188 | Chemical | denotes | IM | http://purl.obolibrary.org/obo/CHEBI_74073 |
T88 | 193-195 | Chemical | denotes | MS | http://purl.obolibrary.org/obo/CHEBI_73613 |
LitCovid-sample-Enju
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1194 | 0-2 | TO | denotes | To |
T1195 | 3-12 | VB | denotes | ascertain |
T1196 | 13-16 | DT | denotes | the |
T1197 | 17-24 | JJ | denotes | precise |
T1198 | 25-35 | NNS | denotes | structures |
T1199 | 36-38 | IN | denotes | of |
T1200 | 39-47 | JJ | denotes | N-linked |
T1201 | 48-55 | NNS | denotes | glycans |
T1202 | 55-56 | -COMMA- | denotes | , |
T1203 | 57-63 | NN | denotes | glycan |
T1204 | 64-69 | NNS | denotes | pools |
T1205 | 70-72 | IN | denotes | of |
T1206 | 73-77 | DT | denotes | each |
T1207 | 78-89 | NN | denotes | coronavirus |
T1208 | 90-91 | NN | denotes | S |
T1209 | 92-99 | NN | denotes | protein |
T1210 | 100-104 | VBD | denotes | were |
T1211 | 105-113 | VBN | denotes | analysed |
T1212 | 114-116 | IN | denotes | by |
T1213 | 117-129 | JJ | denotes | negative-ion |
T1214 | 130-155 | NN | denotes | ion-mobility-electrospray |
T1215 | 156-166 | NN | denotes | ionisation |
T1216 | 167-171 | NN | denotes | mass |
T1217 | 172-184 | NN | denotes | spectrometry |
T1218 | 185-186 | -LRB- | denotes | ( |
T1219 | 186-192 | NN | denotes | IM-ESI |
T1220 | 193-195 | NN | denotes | MS |
T1221 | 195-196 | -RRB- | denotes | ) |
T1222 | 197-198 | -LRB- | denotes | ( |
T1223 | 198-211 | JJ | denotes | Supplementary |
T1224 | 212-218 | NN | denotes | Fig. 1 |
T1225 | 218-219 | -RRB- | denotes | ) |
R1200 | T1195 | T1194 | arg1Of | ascertain,To |
R1201 | T1211 | T1194 | modOf | analysed,To |
R1202 | T1198 | T1195 | arg2Of | structures,ascertain |
R1203 | T1198 | T1196 | arg1Of | structures,the |
R1204 | T1198 | T1197 | arg1Of | structures,precise |
R1205 | T1198 | T1199 | arg1Of | structures,of |
R1206 | T1201 | T1199 | arg2Of | glycans,of |
R1207 | T1201 | T1200 | arg1Of | glycans,N-linked |
R1208 | T1211 | T1202 | arg1Of | analysed,"," |
R1209 | T1204 | T1203 | arg1Of | pools,glycan |
R1210 | T1204 | T1205 | arg1Of | pools,of |
R1211 | T1209 | T1205 | arg2Of | protein,of |
R1212 | T1209 | T1206 | arg1Of | protein,each |
R1213 | T1209 | T1207 | arg1Of | protein,coronavirus |
R1214 | T1209 | T1208 | arg1Of | protein,S |
R1215 | T1204 | T1210 | arg1Of | pools,were |
R1216 | T1211 | T1210 | arg2Of | analysed,were |
R1217 | T1217 | T1211 | arg1Of | spectrometry,analysed |
R1218 | T1204 | T1211 | arg2Of | pools,analysed |
R1219 | T1217 | T1212 | arg2Of | spectrometry,by |
R1220 | T1217 | T1213 | arg1Of | spectrometry,negative-ion |
R1221 | T1217 | T1214 | arg1Of | spectrometry,ion-mobility-electrospray |
R1222 | T1217 | T1215 | arg1Of | spectrometry,ionisation |
R1223 | T1217 | T1216 | arg1Of | spectrometry,mass |
R1224 | T1217 | T1218 | arg1Of | spectrometry,( |
R1225 | T1220 | T1218 | arg2Of | MS,( |
R1226 | T1221 | T1218 | arg3Of | ),( |
R1227 | T1220 | T1219 | arg1Of | MS,IM-ESI |
R1228 | T1217 | T1222 | arg1Of | spectrometry,( |
R1229 | T1224 | T1222 | arg2Of | Fig. 1,( |
R1230 | T1225 | T1222 | arg3Of | ),( |
R1231 | T1224 | T1223 | arg1Of | Fig. 1,Supplementary |
LitCovid-sample-PD-FMA
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T55 | 92-99 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-sample-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T69 | 48-55 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
T70 | 92-99 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
T71 | 126-129 | Chemical | denotes | ion | http://purl.obolibrary.org/obo/CHEBI_24870 |
T72 | 130-133 | Chemical | denotes | ion | http://purl.obolibrary.org/obo/CHEBI_24870 |
LitCovid-sample-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T47 | 0-220 | Sentence | denotes | To ascertain the precise structures of N-linked glycans, glycan pools of each coronavirus S protein were analysed by negative-ion ion-mobility-electrospray ionisation mass spectrometry (IM-ESI MS) (Supplementary Fig. 1). |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
310 | 39-55 | Chemical | denotes | N-linked glycans | |
311 | 57-63 | Chemical | denotes | glycan | MESH:D011134 |
308 | 78-89 | Species | denotes | coronavirus | Tax:11118 |
LitCovid-sample-UniProt
Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
---|---|---|---|---|---|
T2581 | 90-99 | Protein | denotes | S protein | https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9 |
T2614 | 189-192 | Protein | denotes | ESI | https://www.uniprot.org/uniprot/Q6FG74|https://www.uniprot.org/uniprot/P19957|https://www.uniprot.org/uniprot/E1P618 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T47 | 0-220 | Sentence | denotes | To ascertain the precise structures of N-linked glycans, glycan pools of each coronavirus S protein were analysed by negative-ion ion-mobility-electrospray ionisation mass spectrometry (IM-ESI MS) (Supplementary Fig. 1). |