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PMC:7253482 / 7565-8420 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
223 50-61 Species denotes coronavirus Tax:11118
224 470-486 Chemical denotes N-linked glycans
225 515-527 Chemical denotes Oligomannose
226 533-540 Chemical denotes glycans MESH:D011134
227 552-575 Chemical denotes Man5GlcNAc2–Man9GlcNAc2
228 602-609 Chemical denotes glycans MESH:D011134
229 686-692 Chemical denotes glycan MESH:D011134
230 726-738 Chemical denotes Oligomannose
231 744-751 Chemical denotes glycans MESH:D011134
232 785-792 Chemical denotes mannose MESH:D008358
233 823-829 Chemical denotes GlcNAc MESH:D000117
234 30-34 Disease denotes SARS MESH:D045169
235 36-40 Disease denotes MERS MESH:D018352
236 492-496 Disease denotes SARS MESH:D045169
237 498-502 Disease denotes MERS MESH:D018352

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T50 64-77 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T51 127-137 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T52 207-220 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T53 374-379 Body_part denotes helix http://purl.org/sig/ont/fma/fma60992
T54 785-792 Body_part denotes mannose http://purl.org/sig/ont/fma/fma82801

LitCovid-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T2 374-379 Body_part denotes helix http://purl.obolibrary.org/obo/UBERON_0002488

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T29 30-34 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T30 257-260 Disease denotes NTD http://purl.obolibrary.org/obo/MONDO_0008449|http://purl.obolibrary.org/obo/MONDO_0018075
T32 492-496 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T33 715-718 Disease denotes pie http://purl.obolibrary.org/obo/MONDO_0000923

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T42 0-1 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T43 310-313 http://purl.obolibrary.org/obo/CLO_0008975 denotes SD1
T44 325-332 http://purl.obolibrary.org/obo/PR_000018263 denotes peptide
T45 417-418 http://purl.obolibrary.org/obo/CLO_0001021 denotes b
T46 461-469 http://purl.obolibrary.org/obo/CLO_0007225 denotes labelled
T47 548-550 http://purl.obolibrary.org/obo/CLO_0007490 denotes M9
T48 713-714 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T66 64-77 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T67 127-132 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T68 133-137 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T69 207-220 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T70 325-332 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T71 334-336 Chemical denotes FP http://purl.obolibrary.org/obo/CHEBI_74750
T72 412-414 Chemical denotes TM http://purl.obolibrary.org/obo/CHEBI_55460|http://purl.obolibrary.org/obo/CHEBI_74861
T74 479-486 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T75 533-540 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T76 548-550 Chemical denotes M9 http://purl.obolibrary.org/obo/CHEBI_140164
T77 602-609 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T78 611-618 Chemical denotes magenta http://purl.obolibrary.org/obo/CHEBI_87661
T79 744-751 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T80 785-792 Chemical denotes mannose http://purl.obolibrary.org/obo/CHEBI_37684
T81 823-829 Chemical denotes GlcNAc http://purl.obolibrary.org/obo/CHEBI_506227|http://purl.obolibrary.org/obo/CHEBI_73685

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T1146 0-1 DT denotes a
T1147 2-11 JJ denotes Schematic
T1148 12-26 NN denotes representation
T1149 27-29 IN denotes of
T1150 30-34 NNP denotes SARS
T1151 34-35 -COMMA- denotes ,
T1152 36-40 NNS denotes MERS
T1153 41-44 CC denotes and
T1154 45-49 NN denotes HKU1
T1155 50-61 NN denotes coronavirus
T1156 62-63 NN denotes S
T1157 64-77 NNS denotes glycoproteins
T1158 77-78 -COMMA- denotes ,
T1159 79-86 VBG denotes showing
T1160 87-90 DT denotes the
T1161 91-100 NNS denotes positions
T1162 101-103 IN denotes of
T1163 104-112 JJ denotes N-linked
T1164 113-126 NN denotes glycosylation
T1165 127-137 JJ denotes amino-acid
T1166 138-145 NNS denotes sequons
T1167 146-147 -LRB- denotes (
T1168 147-152 NN denotes NXS/T
T1169 152-153 -COMMA- denotes ,
T1170 154-159 WRB denotes where
T1171 160-165 NN denotes X ≠ P
T1172 165-166 -RRB- denotes )
T1173 167-172 VBN denotes shown
T1174 173-175 IN denotes as
T1175 176-184 NNS denotes branches
T1177 726-743 JJ denotes Oligomannose-type
T1178 744-751 NNS denotes glycans
T1179 752-755 VBP denotes are
T1180 756-769 RB denotes schematically
T1181 770-779 VBN denotes annotated
T1182 780-784 IN denotes with
T1183 785-792 NN denotes mannose
T1184 793-801 NNS denotes residues
T1185 802-804 IN denotes as
T1186 805-810 JJ denotes green
T1187 811-818 NNS denotes circles
T1188 819-822 CC denotes and
T1189 823-829 NN denotes GlcNAc
T1190 830-838 NNS denotes residues
T1191 839-841 IN denotes as
T1192 842-846 JJ denotes blue
T1193 847-854 NNS denotes squares
R1154 T1148 T1146 arg1Of representation,a
R1155 T1148 T1147 arg1Of representation,Schematic
R1156 T1148 T1149 arg1Of representation,of
R1157 T1153 T1149 arg2Of and,of
R1158 T1150 T1151 arg1Of SARS,","
R1159 T1152 T1151 arg2Of MERS,","
R1160 T1151 T1153 arg1Of ",",and
R1161 T1157 T1153 arg2Of glycoproteins,and
R1162 T1157 T1154 arg1Of glycoproteins,HKU1
R1163 T1157 T1155 arg1Of glycoproteins,coronavirus
R1164 T1157 T1156 arg1Of glycoproteins,S
R1165 T1148 T1158 arg1Of representation,","
R1166 T1148 T1159 arg1Of representation,showing
R1167 T1161 T1159 arg2Of positions,showing
R1168 T1161 T1160 arg1Of positions,the
R1169 T1161 T1162 arg1Of positions,of
R1170 T1166 T1162 arg2Of sequons,of
R1171 T1166 T1163 arg1Of sequons,N-linked
R1172 T1166 T1164 arg1Of sequons,glycosylation
R1173 T1166 T1165 arg1Of sequons,amino-acid
R1174 T1166 T1167 arg1Of sequons,(
R1175 T1168 T1167 arg2Of NXS/T,(
R1176 T1172 T1167 arg3Of ),(
R1177 T1168 T1169 arg1Of NXS/T,","
R1178 T1171 T1170 arg1Of X ≠ P,where
R1179 T1168 T1171 arg1Of NXS/T,X ≠ P
R1180 T1166 T1173 arg2Of sequons,shown
R1181 T1173 T1174 arg1Of shown,as
R1182 T1175 T1174 arg2Of branches,as
R1183 T1178 T1177 arg1Of glycans,Oligomannose-type
R1184 T1178 T1179 arg1Of glycans,are
R1185 T1181 T1179 arg2Of annotated,are
R1186 T1181 T1180 arg1Of annotated,schematically
R1187 T1178 T1181 arg2Of glycans,annotated
R1188 T1181 T1182 arg1Of annotated,with
R1189 T1184 T1182 arg2Of residues,with
R1190 T1184 T1183 arg1Of residues,mannose
R1191 T1181 T1185 arg1Of annotated,as
R1192 T1188 T1185 arg2Of and,as
R1193 T1187 T1186 arg1Of circles,green
R1194 T1187 T1188 arg1Of circles,and
R1195 T1190 T1188 arg2Of residues,and
R1196 T1190 T1189 arg1Of residues,GlcNAc
R1197 T1181 T1191 arg1Of annotated,as
R1198 T1193 T1191 arg2Of squares,as
R1199 T1193 T1192 arg1Of squares,blue

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T50 64-77 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T51 127-137 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T52 207-220 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T53 374-379 Body_part denotes helix http://purl.org/sig/ont/fma/fma60992
T54 785-792 Body_part denotes mannose http://purl.org/sig/ont/fma/fma82801

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T57 64-77 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T58 127-132 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T59 207-220 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T60 325-332 Chemical denotes peptide http://purl.obolibrary.org/obo/CHEBI_16670
T61 479-486 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T62 533-540 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T63 602-609 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T64 611-618 Chemical denotes magenta http://purl.obolibrary.org/obo/CHEBI_87661
T65 744-751 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T66 785-792 Chemical denotes mannose http://purl.obolibrary.org/obo/CHEBI_37684
T67 823-829 Chemical denotes GlcNAc http://purl.obolibrary.org/obo/CHEBI_506227|http://purl.obolibrary.org/obo/CHEBI_73685

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T55 30-34 Species denotes SARS NCBItxid:694009
T56 36-40 Species denotes MERS NCBItxid:1335626
T57 45-61 Species denotes HKU1 coronavirus NCBItxid:290028
T58 492-496 Species denotes SARS NCBItxid:694009
T59 498-502 Species denotes MERS NCBItxid:1335626

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T43 0-185 Sentence denotes a Schematic representation of SARS, MERS and HKU1 coronavirus S glycoproteins, showing the positions of N-linked glycosylation amino-acid sequons (NXS/T, where X ≠ P) shown as branches.
T44 186-514 Sentence denotes The domains of the S glycoproteins are illustrated: N-terminal domain (NTD), receptor-binding domain (RBD), sub-domain 1/2 (SD1/2), fusion peptide (FP), heptad repeat 1/2 (HR1/2), central helix (CH), and transmembrane domain (TM). b HILIC-UPLC chromatograms of fluorescently labelled N-linked glycans from SARS, MERS and HKU1 S.
T45 515-725 Sentence denotes Oligomannose-type glycans (M5 to M9; Man5GlcNAc2–Man9GlcNAc2) (green) and complex-type glycans (magenta) were identified by Endo H digestion, with quantification of major glycan types summarised as a pie chart.
T46 726-855 Sentence denotes Oligomannose-type glycans are schematically annotated with mannose residues as green circles and GlcNAc residues as blue squares.

LitCovid-sample-PD-UBERON

Id Subject Object Predicate Lexical cue uberon_id
T2 374-379 Body_part denotes helix http://purl.obolibrary.org/obo/UBERON_0002488

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T29 30-34 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T30 492-496 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
234 30-34 Disease denotes SARS MESH:D045169
235 36-40 Disease denotes MERS MESH:D018352
223 50-61 Species denotes coronavirus Tax:11118
224 470-486 Chemical denotes N-linked glycans
236 492-496 Disease denotes SARS MESH:D045169
237 498-502 Disease denotes MERS MESH:D018352
225 515-527 Chemical denotes Oligomannose
226 533-540 Chemical denotes glycans MESH:D011134
227 552-575 Chemical denotes Man5GlcNAc2–Man9GlcNAc2
228 602-609 Chemical denotes glycans MESH:D011134
229 686-692 Chemical denotes glycan MESH:D011134
230 726-738 Chemical denotes Oligomannose
231 744-751 Chemical denotes glycans MESH:D011134
232 785-792 Chemical denotes mannose MESH:D008358
233 823-829 Chemical denotes GlcNAc MESH:D000117

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T2374 62-77 Protein denotes S glycoproteins https://www.uniprot.org/uniprot/Q9QAS2|https://www.uniprot.org/uniprot/Q9QAR5|https://www.uniprot.org/uniprot/Q9QAQ8|https://www.uniprot.org/uniprot/Q9IW04|https://www.uniprot.org/uniprot/Q9IKD1|https://www.uniprot.org/uniprot/Q990M4|https://www.uniprot.org/uniprot/Q990M3|https://www.uniprot.org/uniprot/Q990M2|https://www.uniprot.org/uniprot/Q990M1|https://www.uniprot.org/uniprot/Q91AV1|https://www.uniprot.org/uniprot/Q91A26|https://www.uniprot.org/uniprot/Q8V436|https://www.uniprot.org/uniprot/Q8JSP8|https://www.uniprot.org/uniprot/Q8BB25|https://www.uniprot.org/uniprot/Q86623|https://www.uniprot.org/uniprot/Q85088|https://www.uniprot.org/uniprot/Q85087|https://www.uniprot.org/uniprot/Q80BV6|https://www.uniprot.org/uniprot/Q7TFB1|https://www.uniprot.org/uniprot/Q7TFA2|https://www.uniprot.org/uniprot/Q7TA19|https://www.uniprot.org/uniprot/Q7T6T3|https://www.uniprot.org/uniprot/Q7T696|https://www.uniprot.org/uniprot/Q77NC4|https://www.uniprot.org/uniprot/Q6TNF9|https://www.uniprot.org/uniprot/Q6R1L7|https://www.uniprot.org/uniprot/Q6QU82|https://www.uniprot.org/uniprot/Q6Q1S2|https://www.uniprot.org/uniprot/Q696Q6|https://www.uniprot.org/uniprot/Q66291|https://www.uniprot.org/uniprot/Q66290|https://www.uniprot.org/uniprot/Q66199|https://www.uniprot.org/uniprot/Q66177|https://www.uniprot.org/uniprot/Q66176|https://www.uniprot.org/uniprot/Q66174|https://www.uniprot.org/uniprot/Q65984|https://www.uniprot.org/uniprot/Q5MQD0|https://www.uniprot.org/uniprot/Q5I5X9|https://www.uniprot.org/uniprot/Q5DIY0|https://www.uniprot.org/uniprot/Q5DIX9|https://www.uniprot.org/uniprot/Q5DIX8|https://www.uniprot.org/uniprot/Q5DIX7|https://www.uniprot.org/uniprot/Q52PA3|https://www.uniprot.org/uniprot/Q4ZJS1|https://www.uniprot.org/uniprot/Q4U5G0|https://www.uniprot.org/uniprot/Q3T8J0|https://www.uniprot.org/uniprot/Q3LZX1|https://www.uniprot.org/uniprot/Q3I5J5|https://www.uniprot.org/uniprot/Q14EB0|https://www.uniprot.org/uniprot/Q0ZME7|https://www.uniprot.org/uniprot/Q0Q4F2|https://www.uniprot.org/uniprot/Q0Q475|https://www.uniprot.org/uniprot/Q0Q466|https://www.uniprot.org/uniprot/Q0GNB8|https://www.uniprot.org/uniprot/Q02385|https://www.uniprot.org/uniprot/Q02167|https://www.uniprot.org/uniprot/Q01977|https://www.uniprot.org/uniprot/Q008X4|https://www.uniprot.org/uniprot/P89344|https://www.uniprot.org/uniprot/P89343|https://www.uniprot.org/uniprot/P89342|https://www.uniprot.org/uniprot/P59594|https://www.uniprot.org/uniprot/P36334|https://www.uniprot.org/uniprot/P36300|https://www.uniprot.org/uniprot/P33470|https://www.uniprot.org/uniprot/P30208|https://www.uniprot.org/uniprot/P30207|https://www.uniprot.org/uniprot/P30206|https://www.uniprot.org/uniprot/P30019|https://www.uniprot.org/uniprot/P27655|https://www.uniprot.org/uniprot/P25194|https://www.uniprot.org/uniprot/P25193|https://www.uniprot.org/uniprot/P25192|https://www.uniprot.org/uniprot/P25191|https://www.uniprot.org/uniprot/P25190|https://www.uniprot.org/uniprot/P24413|https://www.uniprot.org/uniprot/P23052|https://www.uniprot.org/uniprot/P22432|https://www.uniprot.org/uniprot/P18450|https://www.uniprot.org/uniprot/P17662|https://www.uniprot.org/uniprot/P15777|https://www.uniprot.org/uniprot/P15423|https://www.uniprot.org/uniprot/P12722|https://www.uniprot.org/uniprot/P12651|https://www.uniprot.org/uniprot/P12650|https://www.uniprot.org/uniprot/P11225|https://www.uniprot.org/uniprot/P11224|https://www.uniprot.org/uniprot/P11223|https://www.uniprot.org/uniprot/P10033|https://www.uniprot.org/uniprot/P0DTC2|https://www.uniprot.org/uniprot/P07946|https://www.uniprot.org/uniprot/P05135|https://www.uniprot.org/uniprot/P05134|https://www.uniprot.org/uniprot/O90304|https://www.uniprot.org/uniprot/O39227|https://www.uniprot.org/uniprot/K9N5Q8|https://www.uniprot.org/uniprot/A3EXG6|https://www.uniprot.org/uniprot/A3EXD0|https://www.uniprot.org/uniprot/A3EX94
T2473 205-220 Protein denotes S glycoproteins https://www.uniprot.org/uniprot/Q9QAS2|https://www.uniprot.org/uniprot/Q9QAR5|https://www.uniprot.org/uniprot/Q9QAQ8|https://www.uniprot.org/uniprot/Q9IW04|https://www.uniprot.org/uniprot/Q9IKD1|https://www.uniprot.org/uniprot/Q990M4|https://www.uniprot.org/uniprot/Q990M3|https://www.uniprot.org/uniprot/Q990M2|https://www.uniprot.org/uniprot/Q990M1|https://www.uniprot.org/uniprot/Q91AV1|https://www.uniprot.org/uniprot/Q91A26|https://www.uniprot.org/uniprot/Q8V436|https://www.uniprot.org/uniprot/Q8JSP8|https://www.uniprot.org/uniprot/Q8BB25|https://www.uniprot.org/uniprot/Q86623|https://www.uniprot.org/uniprot/Q85088|https://www.uniprot.org/uniprot/Q85087|https://www.uniprot.org/uniprot/Q80BV6|https://www.uniprot.org/uniprot/Q7TFB1|https://www.uniprot.org/uniprot/Q7TFA2|https://www.uniprot.org/uniprot/Q7TA19|https://www.uniprot.org/uniprot/Q7T6T3|https://www.uniprot.org/uniprot/Q7T696|https://www.uniprot.org/uniprot/Q77NC4|https://www.uniprot.org/uniprot/Q6TNF9|https://www.uniprot.org/uniprot/Q6R1L7|https://www.uniprot.org/uniprot/Q6QU82|https://www.uniprot.org/uniprot/Q6Q1S2|https://www.uniprot.org/uniprot/Q696Q6|https://www.uniprot.org/uniprot/Q66291|https://www.uniprot.org/uniprot/Q66290|https://www.uniprot.org/uniprot/Q66199|https://www.uniprot.org/uniprot/Q66177|https://www.uniprot.org/uniprot/Q66176|https://www.uniprot.org/uniprot/Q66174|https://www.uniprot.org/uniprot/Q65984|https://www.uniprot.org/uniprot/Q5MQD0|https://www.uniprot.org/uniprot/Q5I5X9|https://www.uniprot.org/uniprot/Q5DIY0|https://www.uniprot.org/uniprot/Q5DIX9|https://www.uniprot.org/uniprot/Q5DIX8|https://www.uniprot.org/uniprot/Q5DIX7|https://www.uniprot.org/uniprot/Q52PA3|https://www.uniprot.org/uniprot/Q4ZJS1|https://www.uniprot.org/uniprot/Q4U5G0|https://www.uniprot.org/uniprot/Q3T8J0|https://www.uniprot.org/uniprot/Q3LZX1|https://www.uniprot.org/uniprot/Q3I5J5|https://www.uniprot.org/uniprot/Q14EB0|https://www.uniprot.org/uniprot/Q0ZME7|https://www.uniprot.org/uniprot/Q0Q4F2|https://www.uniprot.org/uniprot/Q0Q475|https://www.uniprot.org/uniprot/Q0Q466|https://www.uniprot.org/uniprot/Q0GNB8|https://www.uniprot.org/uniprot/Q02385|https://www.uniprot.org/uniprot/Q02167|https://www.uniprot.org/uniprot/Q01977|https://www.uniprot.org/uniprot/Q008X4|https://www.uniprot.org/uniprot/P89344|https://www.uniprot.org/uniprot/P89343|https://www.uniprot.org/uniprot/P89342|https://www.uniprot.org/uniprot/P59594|https://www.uniprot.org/uniprot/P36334|https://www.uniprot.org/uniprot/P36300|https://www.uniprot.org/uniprot/P33470|https://www.uniprot.org/uniprot/P30208|https://www.uniprot.org/uniprot/P30207|https://www.uniprot.org/uniprot/P30206|https://www.uniprot.org/uniprot/P30019|https://www.uniprot.org/uniprot/P27655|https://www.uniprot.org/uniprot/P25194|https://www.uniprot.org/uniprot/P25193|https://www.uniprot.org/uniprot/P25192|https://www.uniprot.org/uniprot/P25191|https://www.uniprot.org/uniprot/P25190|https://www.uniprot.org/uniprot/P24413|https://www.uniprot.org/uniprot/P23052|https://www.uniprot.org/uniprot/P22432|https://www.uniprot.org/uniprot/P18450|https://www.uniprot.org/uniprot/P17662|https://www.uniprot.org/uniprot/P15777|https://www.uniprot.org/uniprot/P15423|https://www.uniprot.org/uniprot/P12722|https://www.uniprot.org/uniprot/P12651|https://www.uniprot.org/uniprot/P12650|https://www.uniprot.org/uniprot/P11225|https://www.uniprot.org/uniprot/P11224|https://www.uniprot.org/uniprot/P11223|https://www.uniprot.org/uniprot/P10033|https://www.uniprot.org/uniprot/P0DTC2|https://www.uniprot.org/uniprot/P07946|https://www.uniprot.org/uniprot/P05135|https://www.uniprot.org/uniprot/P05134|https://www.uniprot.org/uniprot/O90304|https://www.uniprot.org/uniprot/O39227|https://www.uniprot.org/uniprot/K9N5Q8|https://www.uniprot.org/uniprot/A3EXG6|https://www.uniprot.org/uniprot/A3EXD0|https://www.uniprot.org/uniprot/A3EX94
T2572 288-291 Protein denotes RBD https://www.uniprot.org/uniprot/Q63492|https://www.uniprot.org/uniprot/Q63491|https://www.uniprot.org/uniprot/Q62815|https://www.uniprot.org/uniprot/Q62691|https://www.uniprot.org/uniprot/Q01542|https://www.uniprot.org/uniprot/P27732|https://www.uniprot.org/uniprot/O09024|https://www.uniprot.org/uniprot/O09023|https://www.uniprot.org/uniprot/O09022

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T24 113-126 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T25 646-655 http://purl.obolibrary.org/obo/GO_0007586 denotes digestion

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T21 113-126 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T22 646-655 http://purl.obolibrary.org/obo/GO_0007586 denotes digestion

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T23 104-126 http://purl.obolibrary.org/obo/GO_0006487 denotes N-linked glycosylation
T24 113-126 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T25 646-655 http://purl.obolibrary.org/obo/GO_0007586 denotes digestion

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T43 0-185 Sentence denotes a Schematic representation of SARS, MERS and HKU1 coronavirus S glycoproteins, showing the positions of N-linked glycosylation amino-acid sequons (NXS/T, where X ≠ P) shown as branches.
T44 186-514 Sentence denotes The domains of the S glycoproteins are illustrated: N-terminal domain (NTD), receptor-binding domain (RBD), sub-domain 1/2 (SD1/2), fusion peptide (FP), heptad repeat 1/2 (HR1/2), central helix (CH), and transmembrane domain (TM). b HILIC-UPLC chromatograms of fluorescently labelled N-linked glycans from SARS, MERS and HKU1 S.
T45 515-725 Sentence denotes Oligomannose-type glycans (M5 to M9; Man5GlcNAc2–Man9GlcNAc2) (green) and complex-type glycans (magenta) were identified by Endo H digestion, with quantification of major glycan types summarised as a pie chart.
T46 726-855 Sentence denotes Oligomannose-type glycans are schematically annotated with mannose residues as green circles and GlcNAc residues as blue squares.

LitCovid-sample-Glycan

Id Subject Object Predicate Lexical cue
T1 785-792 http://rdf.glyconavi.org/CarTNa/CarTNa218/trivialname denotes mannose
T2 823-829 https://glytoucan.org/Structures/Glycans/G26693XF denotes GlcNAc
T3 823-829 https://glytoucan.org/Structures/Glycans/G01864SU denotes GlcNAc
T4 823-829 https://glytoucan.org/Structures/Glycans/G85391SA denotes GlcNAc
T5 823-829 https://glytoucan.org/Structures/Glycans/G41950LU denotes GlcNAc
T6 823-829 https://glytoucan.org/Structures/Glycans/G57195RJ denotes GlcNAc
T7 823-829 https://glytoucan.org/Structures/Glycans/G17605FD denotes GlcNAc
T8 823-829 https://glytoucan.org/Structures/Glycans/G54644LT denotes GlcNAc
T9 823-829 https://glytoucan.org/Structures/Glycans/G89565QL denotes GlcNAc
T10 823-829 https://glytoucan.org/Structures/Glycans/G55978NL denotes GlcNAc
T11 823-829 https://glytoucan.org/Structures/Glycans/G25126RB denotes GlcNAc
T12 823-829 https://glytoucan.org/Structures/Glycans/G25694UG denotes GlcNAc
T13 823-829 https://glytoucan.org/Structures/Glycans/G80869MR denotes GlcNAc
T14 823-829 https://glytoucan.org/Structures/Glycans/G51848AD denotes GlcNAc
T15 823-829 https://glytoucan.org/Structures/Glycans/G94667GM denotes GlcNAc
T16 823-829 https://glytoucan.org/Structures/Glycans/G30124BO denotes GlcNAc
T17 823-829 https://glytoucan.org/Structures/Glycans/G82777EZ denotes GlcNAc
T18 823-829 https://glytoucan.org/Structures/Glycans/G10151YZ denotes GlcNAc
T19 823-829 https://glytoucan.org/Structures/Glycans/G17585ZM denotes GlcNAc
T20 823-829 https://glytoucan.org/Structures/Glycans/G38254HJ denotes GlcNAc
T21 823-829 https://glytoucan.org/Structures/Glycans/G04411CJ denotes GlcNAc
T22 823-829 https://glytoucan.org/Structures/Glycans/G70374VG denotes GlcNAc
T23 823-829 https://glytoucan.org/Structures/Glycans/G30874VW denotes GlcNAc
T24 823-829 https://glytoucan.org/Structures/Glycans/G45176LJ denotes GlcNAc
T25 823-829 https://glytoucan.org/Structures/Glycans/G75188FS denotes GlcNAc
T26 823-829 https://glytoucan.org/Structures/Glycans/G69333MI denotes GlcNAc
T27 823-829 https://glytoucan.org/Structures/Glycans/G10676XO denotes GlcNAc
T28 823-829 https://glytoucan.org/Structures/Glycans/G14843DJ denotes GlcNAc
T29 823-829 https://glytoucan.org/Structures/Glycans/G47546FR denotes GlcNAc
T30 823-829 https://glytoucan.org/Structures/Glycans/G73695ZM denotes GlcNAc
T31 823-829 https://glytoucan.org/Structures/Glycans/G40745NH denotes GlcNAc
T32 823-829 https://glytoucan.org/Structures/Glycans/G31923TJ denotes GlcNAc
T33 823-829 https://glytoucan.org/Structures/Glycans/G60519EP denotes GlcNAc
T34 823-829 https://glytoucan.org/Structures/Glycans/G07933IA denotes GlcNAc
T35 823-829 https://glytoucan.org/Structures/Glycans/G54496YV denotes GlcNAc
T36 823-829 https://glytoucan.org/Structures/Glycans/G70070AY denotes GlcNAc
T37 823-829 https://glytoucan.org/Structures/Glycans/G62953SQ denotes GlcNAc
T38 823-829 https://glytoucan.org/Structures/Glycans/G25238AV denotes GlcNAc
T39 823-829 https://glytoucan.org/Structures/Glycans/G40510DP denotes GlcNAc
T40 823-829 https://glytoucan.org/Structures/Glycans/G61120TK denotes GlcNAc
T41 823-829 https://glytoucan.org/Structures/Glycans/G81830JX denotes GlcNAc
T42 823-829 https://glytoucan.org/Structures/Glycans/G01591HR denotes GlcNAc
T43 823-829 https://glytoucan.org/Structures/Glycans/G90703NA denotes GlcNAc
T44 823-829 https://glytoucan.org/Structures/Glycans/G56520XN denotes GlcNAc
T45 823-829 https://glytoucan.org/Structures/Glycans/G41342KV denotes GlcNAc