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PMC:7253482 / 7565-7750 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
223 50-61 Species denotes coronavirus Tax:11118
234 30-34 Disease denotes SARS MESH:D045169
235 36-40 Disease denotes MERS MESH:D018352

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T50 64-77 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T51 127-137 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T29 30-34 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T42 0-1 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T66 64-77 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T67 127-132 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T68 133-137 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T1146 0-1 DT denotes a
T1147 2-11 JJ denotes Schematic
T1148 12-26 NN denotes representation
T1149 27-29 IN denotes of
T1150 30-34 NNP denotes SARS
T1151 34-35 -COMMA- denotes ,
T1152 36-40 NNS denotes MERS
T1153 41-44 CC denotes and
T1154 45-49 NN denotes HKU1
T1155 50-61 NN denotes coronavirus
T1156 62-63 NN denotes S
T1157 64-77 NNS denotes glycoproteins
T1158 77-78 -COMMA- denotes ,
T1159 79-86 VBG denotes showing
T1160 87-90 DT denotes the
T1161 91-100 NNS denotes positions
T1162 101-103 IN denotes of
T1163 104-112 JJ denotes N-linked
T1164 113-126 NN denotes glycosylation
T1165 127-137 JJ denotes amino-acid
T1166 138-145 NNS denotes sequons
T1167 146-147 -LRB- denotes (
T1168 147-152 NN denotes NXS/T
T1169 152-153 -COMMA- denotes ,
T1170 154-159 WRB denotes where
T1171 160-165 NN denotes X ≠ P
T1172 165-166 -RRB- denotes )
T1173 167-172 VBN denotes shown
T1174 173-175 IN denotes as
T1175 176-184 NNS denotes branches
R1154 T1148 T1146 arg1Of representation,a
R1155 T1148 T1147 arg1Of representation,Schematic
R1156 T1148 T1149 arg1Of representation,of
R1157 T1153 T1149 arg2Of and,of
R1158 T1150 T1151 arg1Of SARS,","
R1159 T1152 T1151 arg2Of MERS,","
R1160 T1151 T1153 arg1Of ",",and
R1161 T1157 T1153 arg2Of glycoproteins,and
R1162 T1157 T1154 arg1Of glycoproteins,HKU1
R1163 T1157 T1155 arg1Of glycoproteins,coronavirus
R1164 T1157 T1156 arg1Of glycoproteins,S
R1165 T1148 T1158 arg1Of representation,","
R1166 T1148 T1159 arg1Of representation,showing
R1167 T1161 T1159 arg2Of positions,showing
R1168 T1161 T1160 arg1Of positions,the
R1169 T1161 T1162 arg1Of positions,of
R1170 T1166 T1162 arg2Of sequons,of
R1171 T1166 T1163 arg1Of sequons,N-linked
R1172 T1166 T1164 arg1Of sequons,glycosylation
R1173 T1166 T1165 arg1Of sequons,amino-acid
R1174 T1166 T1167 arg1Of sequons,(
R1175 T1168 T1167 arg2Of NXS/T,(
R1176 T1172 T1167 arg3Of ),(
R1177 T1168 T1169 arg1Of NXS/T,","
R1178 T1171 T1170 arg1Of X ≠ P,where
R1179 T1168 T1171 arg1Of NXS/T,X ≠ P
R1180 T1166 T1173 arg2Of sequons,shown
R1181 T1173 T1174 arg1Of shown,as
R1182 T1175 T1174 arg2Of branches,as

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T50 64-77 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T51 127-137 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T57 64-77 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T58 127-132 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T55 30-34 Species denotes SARS NCBItxid:694009
T56 36-40 Species denotes MERS NCBItxid:1335626
T57 45-61 Species denotes HKU1 coronavirus NCBItxid:290028

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T43 0-185 Sentence denotes a Schematic representation of SARS, MERS and HKU1 coronavirus S glycoproteins, showing the positions of N-linked glycosylation amino-acid sequons (NXS/T, where X ≠ P) shown as branches.

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T29 30-34 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
234 30-34 Disease denotes SARS MESH:D045169
235 36-40 Disease denotes MERS MESH:D018352
223 50-61 Species denotes coronavirus Tax:11118

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T2374 62-77 Protein denotes S glycoproteins https://www.uniprot.org/uniprot/Q9QAS2|https://www.uniprot.org/uniprot/Q9QAR5|https://www.uniprot.org/uniprot/Q9QAQ8|https://www.uniprot.org/uniprot/Q9IW04|https://www.uniprot.org/uniprot/Q9IKD1|https://www.uniprot.org/uniprot/Q990M4|https://www.uniprot.org/uniprot/Q990M3|https://www.uniprot.org/uniprot/Q990M2|https://www.uniprot.org/uniprot/Q990M1|https://www.uniprot.org/uniprot/Q91AV1|https://www.uniprot.org/uniprot/Q91A26|https://www.uniprot.org/uniprot/Q8V436|https://www.uniprot.org/uniprot/Q8JSP8|https://www.uniprot.org/uniprot/Q8BB25|https://www.uniprot.org/uniprot/Q86623|https://www.uniprot.org/uniprot/Q85088|https://www.uniprot.org/uniprot/Q85087|https://www.uniprot.org/uniprot/Q80BV6|https://www.uniprot.org/uniprot/Q7TFB1|https://www.uniprot.org/uniprot/Q7TFA2|https://www.uniprot.org/uniprot/Q7TA19|https://www.uniprot.org/uniprot/Q7T6T3|https://www.uniprot.org/uniprot/Q7T696|https://www.uniprot.org/uniprot/Q77NC4|https://www.uniprot.org/uniprot/Q6TNF9|https://www.uniprot.org/uniprot/Q6R1L7|https://www.uniprot.org/uniprot/Q6QU82|https://www.uniprot.org/uniprot/Q6Q1S2|https://www.uniprot.org/uniprot/Q696Q6|https://www.uniprot.org/uniprot/Q66291|https://www.uniprot.org/uniprot/Q66290|https://www.uniprot.org/uniprot/Q66199|https://www.uniprot.org/uniprot/Q66177|https://www.uniprot.org/uniprot/Q66176|https://www.uniprot.org/uniprot/Q66174|https://www.uniprot.org/uniprot/Q65984|https://www.uniprot.org/uniprot/Q5MQD0|https://www.uniprot.org/uniprot/Q5I5X9|https://www.uniprot.org/uniprot/Q5DIY0|https://www.uniprot.org/uniprot/Q5DIX9|https://www.uniprot.org/uniprot/Q5DIX8|https://www.uniprot.org/uniprot/Q5DIX7|https://www.uniprot.org/uniprot/Q52PA3|https://www.uniprot.org/uniprot/Q4ZJS1|https://www.uniprot.org/uniprot/Q4U5G0|https://www.uniprot.org/uniprot/Q3T8J0|https://www.uniprot.org/uniprot/Q3LZX1|https://www.uniprot.org/uniprot/Q3I5J5|https://www.uniprot.org/uniprot/Q14EB0|https://www.uniprot.org/uniprot/Q0ZME7|https://www.uniprot.org/uniprot/Q0Q4F2|https://www.uniprot.org/uniprot/Q0Q475|https://www.uniprot.org/uniprot/Q0Q466|https://www.uniprot.org/uniprot/Q0GNB8|https://www.uniprot.org/uniprot/Q02385|https://www.uniprot.org/uniprot/Q02167|https://www.uniprot.org/uniprot/Q01977|https://www.uniprot.org/uniprot/Q008X4|https://www.uniprot.org/uniprot/P89344|https://www.uniprot.org/uniprot/P89343|https://www.uniprot.org/uniprot/P89342|https://www.uniprot.org/uniprot/P59594|https://www.uniprot.org/uniprot/P36334|https://www.uniprot.org/uniprot/P36300|https://www.uniprot.org/uniprot/P33470|https://www.uniprot.org/uniprot/P30208|https://www.uniprot.org/uniprot/P30207|https://www.uniprot.org/uniprot/P30206|https://www.uniprot.org/uniprot/P30019|https://www.uniprot.org/uniprot/P27655|https://www.uniprot.org/uniprot/P25194|https://www.uniprot.org/uniprot/P25193|https://www.uniprot.org/uniprot/P25192|https://www.uniprot.org/uniprot/P25191|https://www.uniprot.org/uniprot/P25190|https://www.uniprot.org/uniprot/P24413|https://www.uniprot.org/uniprot/P23052|https://www.uniprot.org/uniprot/P22432|https://www.uniprot.org/uniprot/P18450|https://www.uniprot.org/uniprot/P17662|https://www.uniprot.org/uniprot/P15777|https://www.uniprot.org/uniprot/P15423|https://www.uniprot.org/uniprot/P12722|https://www.uniprot.org/uniprot/P12651|https://www.uniprot.org/uniprot/P12650|https://www.uniprot.org/uniprot/P11225|https://www.uniprot.org/uniprot/P11224|https://www.uniprot.org/uniprot/P11223|https://www.uniprot.org/uniprot/P10033|https://www.uniprot.org/uniprot/P0DTC2|https://www.uniprot.org/uniprot/P07946|https://www.uniprot.org/uniprot/P05135|https://www.uniprot.org/uniprot/P05134|https://www.uniprot.org/uniprot/O90304|https://www.uniprot.org/uniprot/O39227|https://www.uniprot.org/uniprot/K9N5Q8|https://www.uniprot.org/uniprot/A3EXG6|https://www.uniprot.org/uniprot/A3EXD0|https://www.uniprot.org/uniprot/A3EX94

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T24 113-126 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T21 113-126 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T23 104-126 http://purl.obolibrary.org/obo/GO_0006487 denotes N-linked glycosylation
T24 113-126 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T43 0-185 Sentence denotes a Schematic representation of SARS, MERS and HKU1 coronavirus S glycoproteins, showing the positions of N-linked glycosylation amino-acid sequons (NXS/T, where X ≠ P) shown as branches.