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PMC:7253482 / 715-890 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
29 30-41 Species denotes coronavirus Tax:11118
30 85-90 Species denotes HIV-1 Tax:11676
31 101-112 Species denotes Lassa virus Tax:11620
32 139-148 Species denotes influenza Tax:11320
37 12-18 Chemical denotes glycan MESH:D011134

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T3 66-74 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T4 85-88 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T5 113-125 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T4 139-148 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T4 107-112 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T3 66-74 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T4 113-125 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T5 107-112 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T111 1-4 DT denotes the
T112 5-11 JJ denotes global
T113 12-18 NN denotes glycan
T114 19-26 NN denotes density
T115 27-29 IN denotes of
T116 30-41 NN denotes coronavirus
T117 42-48 NNS denotes spikes
T118 49-53 IN denotes with
T119 54-59 JJ denotes other
T120 60-65 JJ denotes viral
T121 66-74 NNS denotes proteins
T122 75-84 VBG denotes including
T123 85-90 NN denotes HIV-1
T124 91-99 NN denotes envelope
T125 99-100 -COMMA- denotes ,
T126 101-106 NNP denotes Lassa
T127 107-112 NN denotes virus
T128 113-125 NN denotes glycoprotein
T129 126-133 NN denotes complex
T130 133-134 -COMMA- denotes ,
T131 135-138 CC denotes and
T132 139-148 NN denotes influenza
T133 149-162 NN denotes hemagglutinin
T134 162-163 -COMMA- denotes ,
T135 164-169 WRB denotes where
R108 T114 T111 arg1Of density,the
R109 T114 T112 arg1Of density,global
R110 T114 T113 arg1Of density,glycan
R111 T114 T115 arg1Of density,of
R112 T117 T115 arg2Of spikes,of
R113 T117 T116 arg1Of spikes,coronavirus
R115 T121 T118 arg2Of proteins,with
R116 T121 T119 arg1Of proteins,other
R117 T121 T120 arg1Of proteins,viral
R118 T121 T122 arg1Of proteins,including
R119 T131 T122 arg2Of and,including
R120 T124 T123 arg1Of envelope,HIV-1
R121 T124 T125 arg1Of envelope,","
R122 T129 T125 arg2Of complex,","
R123 T129 T126 arg1Of complex,Lassa
R124 T129 T127 arg1Of complex,virus
R125 T129 T128 arg1Of complex,glycoprotein
R126 T131 T130 arg1Of and,","
R127 T125 T131 arg1Of ",",and
R128 T133 T131 arg2Of hemagglutinin,and
R129 T133 T132 arg1Of hemagglutinin,influenza
R130 T131 T134 arg1Of and,","
R131 T131 T135 arg1Of and,where

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T3 66-74 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T4 85-88 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T5 113-125 Body_part denotes glycoprotein http://purl.org/sig/ont/fma/fma62925

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T3 66-74 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T4 113-125 Chemical denotes glycoprotein http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T7 85-90 Species denotes HIV-1 NCBItxid:11676
T8 101-112 Species denotes Lassa virus NCBItxid:11620

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T4 139-148 Disease denotes influenza http://purl.obolibrary.org/obo/MONDO_0005812

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
37 12-18 Chemical denotes glycan MESH:D011134
29 30-41 Species denotes coronavirus Tax:11118
30 85-90 Species denotes HIV-1 Tax:11676
31 101-112 Species denotes Lassa virus Tax:11620
32 139-148 Species denotes influenza Tax:11320

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T133 113-125 Protein denotes glycoprotein https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8
T218 149-162 Protein denotes hemagglutinin 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