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PMC:7253482 / 6578-6827 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
269 243-246 Gene denotes Env Gene:64006
270 237-242 Species denotes HIV-1 Tax:11676
283 56-68 Chemical denotes oligomannose
284 74-81 Chemical denotes glycans MESH:D011134
285 98-109 Chemical denotes Man5GlcNAc2 MESH:C058642
286 113-124 Chemical denotes Man9GlcNAc2 MESH:C475461
287 125-132 Chemical denotes glycans MESH:D011134

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T41 214-227 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T42 237-240 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T57 74-81 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T58 125-132 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T59 214-227 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T996 0-2 PRP denotes It
T997 3-5 VBZ denotes is
T998 6-10 RB denotes also
T999 11-22 JJ denotes interesting
T1000 23-25 TO denotes to
T1001 26-30 VB denotes note
T1002 31-35 IN denotes that
T1003 36-39 DT denotes the
T1004 40-52 NN denotes distribution
T1005 53-55 IN denotes of
T1006 56-73 JJ denotes oligomannose-type
T1007 74-81 NNS denotes glycans
T1008 82-85 VBD denotes was
T1009 86-91 JJ denotes broad
T1010 91-92 -COMMA- denotes ,
T1011 93-97 IN denotes with
T1012 98-109 NN denotes Man5GlcNAc2
T1013 110-112 TO denotes to
T1014 113-124 NN denotes Man9GlcNAc2
T1015 125-132 NNS denotes glycans
T1016 133-136 DT denotes all
T1017 137-144 VBP denotes present
T1018 144-145 -COMMA- denotes ,
T1019 146-153 IN denotes without
T1020 154-157 CD denotes one
T1021 158-168 JJ denotes particular
T1022 169-177 JJ denotes dominant
T1023 178-182 NN denotes peak
T1024 182-183 -COMMA- denotes ,
T1025 184-186 IN denotes as
T1026 187-189 VBZ denotes is
T1027 190-193 DT denotes the
T1028 194-198 NN denotes case
T1029 199-202 IN denotes for
T1030 203-207 DT denotes some
T1031 208-213 JJ denotes viral
T1032 214-227 NNS denotes glycoproteins
T1033 227-228 -COMMA- denotes ,
T1034 229-233 JJ denotes such
T1035 234-236 IN denotes as
T1036 237-242 NN denotes HIV-1
T1037 243-248 NN denotes Env36
R1001 T1001 T996 arg1Of note,It
R1002 T1001 T997 arg1Of note,is
R1003 T999 T997 arg2Of interesting,is
R1004 T997 T998 arg1Of is,also
R1005 T1001 T999 arg1Of note,interesting
R1006 T1001 T1000 arg1Of note,to
R1007 T1008 T1001 arg2Of was,note
R1008 T1008 T1002 arg1Of was,that
R1009 T1004 T1003 arg1Of distribution,the
R1010 T1004 T1005 arg1Of distribution,of
R1011 T1007 T1005 arg2Of glycans,of
R1012 T1007 T1006 arg1Of glycans,oligomannose-type
R1013 T1004 T1008 arg1Of distribution,was
R1014 T1009 T1008 arg2Of broad,was
R1015 T1004 T1009 arg1Of distribution,broad
R1016 T1017 T1009 arg2Of present,broad
R1017 T1009 T1010 arg1Of broad,","
R1018 T1009 T1011 arg1Of broad,with
R1019 T1012 T1011 arg2Of Man5GlcNAc2,with
R1020 T1014 T1013 arg1Of Man9GlcNAc2,to
R1021 T1015 T1014 arg2Of glycans,Man9GlcNAc2
R1022 T1017 T1016 arg1Of present,all
R1023 T1014 T1017 arg1Of Man9GlcNAc2,present
R1024 T1017 T1018 arg1Of present,","
R1025 T1017 T1019 arg1Of present,without
R1026 T1023 T1019 arg2Of peak,without
R1027 T1023 T1020 arg1Of peak,one
R1028 T1023 T1021 arg1Of peak,particular
R1029 T1023 T1022 arg1Of peak,dominant
R1030 T1017 T1024 arg1Of present,","
R1031 T1017 T1025 arg1Of present,as
R1032 T1026 T1025 arg2Of is,as
R1033 T1028 T1026 arg1Of case,is
R1034 T1028 T1027 arg1Of case,the
R1035 T1028 T1029 arg1Of case,for
R1036 T1032 T1029 arg2Of glycoproteins,for
R1037 T1032 T1030 arg1Of glycoproteins,some
R1038 T1032 T1031 arg1Of glycoproteins,viral
R1039 T1032 T1033 arg1Of glycoproteins,","
R1040 T1035 T1034 arg1Of as,such
R1041 T1032 T1035 arg1Of glycoproteins,as
R1042 T1037 T1035 arg2Of Env36,as
R1043 T1037 T1036 arg1Of Env36,HIV-1

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T41 214-227 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T42 237-240 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T49 74-81 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T50 125-132 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T51 214-227 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T48 237-242 Species denotes HIV-1 NCBItxid:11676

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T38 0-249 Sentence denotes It is also interesting to note that the distribution of oligomannose-type glycans was broad, with Man5GlcNAc2 to Man9GlcNAc2 glycans all present, without one particular dominant peak, as is the case for some viral glycoproteins, such as HIV-1 Env36.

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
283 56-68 Chemical denotes oligomannose
284 74-81 Chemical denotes glycans MESH:D011134
285 98-109 Chemical denotes Man5GlcNAc2 MESH:C058642
286 113-124 Chemical denotes Man9GlcNAc2 MESH:C475461
287 125-132 Chemical denotes glycans MESH:D011134
270 237-242 Species denotes HIV-1 Tax:11676
269 243-246 Gene denotes Env Gene:64006

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T2171 214-227 Protein denotes glycoproteins https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T38 0-249 Sentence denotes It is also interesting to note that the distribution of oligomannose-type glycans was broad, with Man5GlcNAc2 to Man9GlcNAc2 glycans all present, without one particular dominant peak, as is the case for some viral glycoproteins, such as HIV-1 Env36.