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PMC:7253482 / 5486-5759 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
198 93-98 Gene denotes spike Gene:43740568
199 49-55 Chemical denotes Glycan MESH:D011134
200 79-83 Disease denotes SARS MESH:D045169
201 88-92 Disease denotes MERS MESH:D018352
291 199-203 Disease denotes SARS MESH:D045169
292 208-212 Disease denotes MERS MESH:D018352

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T35 99-107 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T36 151-159 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T37 215-222 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T23 79-83 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T24 199-203 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T35 120-121 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T45 49-55 Chemical denotes Glycan http://purl.obolibrary.org/obo/CHEBI_18154
T46 99-107 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T47 151-159 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T48 215-222 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T49 223-231 Chemical denotes antigens http://purl.obolibrary.org/obo/CHEBI_59132

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T822 2-7 JJ denotes viral
T823 8-14 JJ denotes immune
T824 15-22 NN denotes evasion
T825 25-32 NNS denotes Results
T826 33-36 CC denotes and
T827 37-47 NN denotes discussion
T828 49-55 NN denotes Glycan
T829 56-66 NN denotes processing
T830 67-69 IN denotes of
T831 70-78 JJ denotes trimeric
T832 79-83 NNS denotes SARS
T833 84-87 CC denotes and
T834 88-92 NNS denotes MERS
T835 93-98 NN denotes spike
T836 99-107 NNS denotes proteins
T837 108-110 TO denotes To
T838 111-119 VB denotes generate
T839 120-121 DT denotes a
T840 122-129 JJ denotes soluble
T841 130-135 NN denotes mimic
T842 136-138 IN denotes of
T843 139-142 DT denotes the
T844 143-148 JJ denotes viral
T845 149-150 NN denotes S
T846 151-159 NNS denotes proteins
T847 159-160 -COMMA- denotes ,
T848 161-163 PRP denotes we
T849 164-168 VBD denotes used
T850 169-172 DT denotes the
T851 173-186 JJ denotes 2P-stabilised
T852 187-198 JJ denotes native-like
T853 199-203 NNS denotes SARS
T854 204-207 CC denotes and
T855 208-212 NNS denotes MERS
T856 213-214 NN denotes S
T857 215-222 NN denotes protein
T858 223-231 NNS denotes antigens
T859 231-232 -COMMA- denotes ,
T860 233-236 DT denotes the
T861 237-243 NN denotes design
T862 244-247 CC denotes and
T863 248-258 NNS denotes structures
T864 259-261 IN denotes of
T865 262-267 WDT denotes which
T866 268-272 VBP denotes have
R826 T824 T822 arg1Of evasion,viral
R827 T824 T823 arg1Of evasion,immune
R828 T825 T826 arg1Of Results,and
R829 T827 T826 arg2Of discussion,and
R830 T829 T828 arg1Of processing,Glycan
R831 T829 T830 arg1Of processing,of
R832 T833 T830 arg2Of and,of
R833 T832 T831 arg1Of SARS,trimeric
R834 T832 T833 arg1Of SARS,and
R835 T836 T833 arg2Of proteins,and
R836 T836 T834 arg1Of proteins,MERS
R837 T836 T835 arg1Of proteins,spike
R838 T838 T837 arg1Of generate,To
R839 T849 T837 modOf used,To
R840 T848 T838 arg1Of we,generate
R841 T841 T838 arg2Of mimic,generate
R842 T841 T839 arg1Of mimic,a
R843 T841 T840 arg1Of mimic,soluble
R844 T841 T842 arg1Of mimic,of
R845 T846 T842 arg2Of proteins,of
R846 T846 T843 arg1Of proteins,the
R847 T846 T844 arg1Of proteins,viral
R848 T846 T845 arg1Of proteins,S
R849 T849 T847 arg1Of used,","
R850 T848 T849 arg1Of we,used
R851 T854 T849 arg2Of and,used
R852 T853 T850 arg1Of SARS,the
R853 T853 T851 arg1Of SARS,2P-stabilised
R854 T853 T852 arg1Of SARS,native-like
R855 T853 T854 arg1Of SARS,and
R856 T858 T854 arg2Of antigens,and
R857 T858 T855 arg1Of antigens,MERS
R858 T858 T856 arg1Of antigens,S
R859 T858 T857 arg1Of antigens,protein
R861 T862 T860 arg1Of and,the
R862 T861 T862 arg1Of design,and
R863 T863 T862 arg2Of structures,and
R864 T862 T864 arg1Of and,of
R865 T858 T864 arg2Of antigens,of
R866 T858 T865 arg1Of antigens,which
R867 T862 T866 arg1Of and,have

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T35 99-107 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T36 151-159 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T37 215-222 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T38 49-55 Chemical denotes Glycan http://purl.obolibrary.org/obo/CHEBI_18154
T39 99-107 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T40 151-159 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T41 215-222 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T40 79-83 Species denotes SARS NCBItxid:694009
T41 88-92 Species denotes MERS NCBItxid:1335626
T42 199-203 Species denotes SARS NCBItxid:694009
T43 208-212 Species denotes MERS NCBItxid:1335626

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T30 25-47 Sentence denotes Results and discussion
T31 49-107 Sentence denotes Glycan processing of trimeric SARS and MERS spike proteins

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T23 79-83 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T24 199-203 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
199 49-55 Chemical denotes Glycan MESH:D011134
200 79-83 Disease denotes SARS MESH:D045169
201 88-92 Disease denotes MERS MESH:D018352
198 93-98 Gene denotes spike Gene:43740568
291 199-203 Disease denotes SARS MESH:D045169
292 208-212 Disease denotes MERS MESH:D018352

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T1972 93-107 Protein denotes spike proteins https://www.uniprot.org/uniprot/P31340
T1973 149-159 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T2006 213-222 Protein denotes S protein https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T19 8-22 http://purl.obolibrary.org/obo/GO_0020012 denotes immune evasion
T20 8-22 http://purl.obolibrary.org/obo/GO_0051805 denotes immune evasion

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T17 8-22 http://purl.obolibrary.org/obo/GO_0042783 denotes immune evasion

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T19 8-22 http://purl.obolibrary.org/obo/GO_0042783 denotes immune evasion

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T30 25-47 Sentence denotes Results and discussion
T31 49-107 Sentence denotes Glycan processing of trimeric SARS and MERS spike proteins