> top > docs > PMC:7253482 > spans > 4838-5177 > annotations

PMC:7253482 / 4838-5177 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
173 109-114 Species denotes HIV-1 Tax:11676
181 9-25 Chemical denotes N-linked glycans
182 84-90 Chemical denotes glycan MESH:D011134
183 228-234 Chemical denotes glycan MESH:D011134
192 100-104 Disease denotes SARS MESH:D045169
193 255-259 Disease denotes SARS MESH:D045169

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T31 109-112 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T32 124-132 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T33 288-301 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T21 100-104 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T22 255-259 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T33 219-220 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T34 326-327 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T39 18-25 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T40 124-132 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T41 144-152 Chemical denotes electron http://purl.obolibrary.org/obo/CHEBI_10545
T42 170-172 Chemical denotes EM http://purl.obolibrary.org/obo/CHEBI_73507
T43 288-301 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-MedDRA

Id Subject Object Predicate Lexical cue meddra_id
T2 153-163 http://purl.bioontology.org/ontology/MEDDRA/10022891 denotes microscopy http://purl.bioontology.org/ontology/MEDDRA/10069374

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T729 6-8 IN denotes by
T730 9-17 JJ denotes N-linked
T731 18-25 NNS denotes glycans
T732 27-29 IN denotes In
T733 30-38 NN denotes addition
T734 38-39 -COMMA- denotes ,
T735 40-42 PRP denotes we
T736 43-50 VBP denotes compare
T737 51-54 DT denotes the
T738 55-65 NNS denotes structures
T739 66-68 IN denotes of
T740 69-72 DT denotes the
T741 73-83 JJ denotes respective
T742 84-90 NN denotes glycan
T743 91-96 NNS denotes coats
T744 97-99 IN denotes of
T745 100-104 NN denotes SARS
T746 105-108 CC denotes and
T747 109-114 NN denotes HIV-1
T748 115-123 NN denotes envelope
T749 124-132 NNS denotes proteins
T750 133-138 VBG denotes using
T751 139-152 NN denotes cryo-electron
T752 153-163 NN denotes microscopy
T753 164-165 -LRB- denotes (
T754 165-172 NN denotes cryo-EM
T755 172-173 -RRB- denotes )
T756 174-177 CC denotes and
T757 178-191 JJ denotes computational
T758 192-201 NN denotes modelling
T759 201-202 -COMMA- denotes ,
T760 203-208 WDT denotes which
T761 209-218 VBP denotes delineate
T762 219-220 DT denotes a
T763 221-227 JJ denotes sparse
T764 228-234 NN denotes glycan
T765 235-241 NN denotes shield
T766 242-251 VBD denotes exhibited
T767 252-254 IN denotes on
T768 255-259 NNP denotes SARS
T769 260-261 NN denotes S
T770 262-270 VBN denotes compared
T771 271-275 IN denotes with
T772 276-281 JJ denotes other
T773 282-287 JJ denotes viral
T774 288-301 NNS denotes glycoproteins
T775 303-305 PRP denotes We
T776 306-315 RB denotes therefore
T777 316-325 VBD denotes undertook
T778 326-327 DT denotes a
T779 328-339 JJ denotes comparative
R736 T731 T729 arg2Of glycans,by
R737 T731 T730 arg1Of glycans,N-linked
R738 T746 T732 arg1Of and,In
R739 T733 T732 arg2Of addition,In
R740 T746 T734 arg1Of and,","
R741 T735 T736 arg1Of we,compare
R742 T738 T736 arg2Of structures,compare
R743 T738 T737 arg1Of structures,the
R744 T738 T739 arg1Of structures,of
R745 T743 T739 arg2Of coats,of
R746 T743 T740 arg1Of coats,the
R747 T743 T741 arg1Of coats,respective
R748 T743 T742 arg1Of coats,glycan
R749 T743 T744 arg1Of coats,of
R750 T745 T744 arg2Of SARS,of
R751 T736 T746 arg1Of compare,and
R752 T766 T746 arg2Of exhibited,and
R753 T749 T747 arg1Of proteins,HIV-1
R754 T749 T748 arg1Of proteins,envelope
R755 T749 T750 arg1Of proteins,using
R756 T756 T750 arg2Of and,using
R757 T752 T751 arg1Of microscopy,cryo-electron
R758 T752 T753 arg1Of microscopy,(
R759 T754 T753 arg2Of cryo-EM,(
R760 T755 T753 arg3Of ),(
R761 T752 T756 arg1Of microscopy,and
R762 T758 T756 arg2Of modelling,and
R763 T758 T757 arg1Of modelling,computational
R764 T758 T759 arg1Of modelling,","
R765 T758 T760 arg1Of modelling,which
R766 T758 T761 arg1Of modelling,delineate
R767 T765 T761 arg2Of shield,delineate
R768 T765 T762 arg1Of shield,a
R769 T765 T763 arg1Of shield,sparse
R770 T765 T764 arg1Of shield,glycan
R771 T749 T766 arg1Of proteins,exhibited
R772 T769 T766 arg2Of S,exhibited
R773 T766 T767 arg1Of exhibited,on
R774 T768 T767 arg2Of SARS,on
R775 T766 T770 arg1Of exhibited,compared
R776 T771 T770 arg2Of with,compared
R777 T774 T771 arg2Of glycoproteins,with
R778 T774 T772 arg1Of glycoproteins,other
R779 T774 T773 arg1Of glycoproteins,viral
R780 T777 T776 arg1Of undertook,therefore
R781 T775 T777 arg1Of We,undertook

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T31 109-112 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T32 124-132 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T33 288-301 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T34 18-25 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T35 124-132 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T36 288-301 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T37 100-104 Species denotes SARS NCBItxid:694009
T38 109-114 Species denotes HIV-1 NCBItxid:11676
T39 255-259 Species denotes SARS NCBItxid:694009

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T27 27-302 Sentence denotes In addition, we compare the structures of the respective glycan coats of SARS and HIV-1 envelope proteins using cryo-electron microscopy (cryo-EM) and computational modelling, which delineate a sparse glycan shield exhibited on SARS S compared with other viral glycoproteins.

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T21 100-104 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T22 255-259 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
181 9-25 Chemical denotes N-linked glycans
182 84-90 Chemical denotes glycan MESH:D011134
192 100-104 Disease denotes SARS MESH:D045169
173 109-114 Species denotes HIV-1 Tax:11676
183 228-234 Chemical denotes glycan MESH:D011134
193 255-259 Disease denotes SARS MESH:D045169

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T1883 115-132 Protein denotes envelope proteins https://www.uniprot.org/uniprot/P24123|https://www.uniprot.org/uniprot/P0C782|https://www.uniprot.org/uniprot/P0C781|https://www.uniprot.org/uniprot/C1JJY3
T1887 288-301 Protein denotes glycoproteins https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T27 27-302 Sentence denotes In addition, we compare the structures of the respective glycan coats of SARS and HIV-1 envelope proteins using cryo-electron microscopy (cryo-EM) and computational modelling, which delineate a sparse glycan shield exhibited on SARS S compared with other viral glycoproteins.