PMC:7253482 / 4802-5013
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
173 | 145-150 | Species | denotes | HIV-1 | Tax:11676 |
181 | 45-61 | Chemical | denotes | N-linked glycans | |
182 | 120-126 | Chemical | denotes | glycan | MESH:D011134 |
192 | 136-140 | Disease | denotes | SARS | MESH:D045169 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T30 | 11-19 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T31 | 145-148 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
T32 | 160-168 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T21 | 136-140 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T38 | 11-19 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T39 | 54-61 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
T40 | 160-168 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T41 | 180-188 | Chemical | denotes | electron | http://purl.obolibrary.org/obo/CHEBI_10545 |
T42 | 206-208 | Chemical | denotes | EM | http://purl.obolibrary.org/obo/CHEBI_73507 |
LitCovid-sample-MedDRA
Id | Subject | Object | Predicate | Lexical cue | meddra_id |
---|---|---|---|---|---|
T2 | 189-199 | http://purl.bioontology.org/ontology/MEDDRA/10022891 | denotes | microscopy | http://purl.bioontology.org/ontology/MEDDRA/10069374 |
LitCovid-sample-Enju
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T721 | 2-4 | IN | denotes | of |
T722 | 5-8 | DT | denotes | the |
T723 | 9-10 | NN | denotes | S |
T724 | 11-19 | NNS | denotes | proteins |
T725 | 20-24 | WDT | denotes | that |
T726 | 25-28 | VBP | denotes | are |
T727 | 29-32 | RB | denotes | not |
T728 | 33-41 | VBN | denotes | occluded |
T729 | 42-44 | IN | denotes | by |
T730 | 45-53 | JJ | denotes | N-linked |
T731 | 54-61 | NNS | denotes | glycans |
T732 | 63-65 | IN | denotes | In |
T733 | 66-74 | NN | denotes | addition |
T734 | 74-75 | -COMMA- | denotes | , |
T735 | 76-78 | PRP | denotes | we |
T736 | 79-86 | VBP | denotes | compare |
T737 | 87-90 | DT | denotes | the |
T738 | 91-101 | NNS | denotes | structures |
T739 | 102-104 | IN | denotes | of |
T740 | 105-108 | DT | denotes | the |
T741 | 109-119 | JJ | denotes | respective |
T742 | 120-126 | NN | denotes | glycan |
T743 | 127-132 | NNS | denotes | coats |
T744 | 133-135 | IN | denotes | of |
T745 | 136-140 | NN | denotes | SARS |
T746 | 141-144 | CC | denotes | and |
T747 | 145-150 | NN | denotes | HIV-1 |
T748 | 151-159 | NN | denotes | envelope |
T749 | 160-168 | NNS | denotes | proteins |
T750 | 169-174 | VBG | denotes | using |
T751 | 175-188 | NN | denotes | cryo-electron |
T752 | 189-199 | NN | denotes | microscopy |
T753 | 200-201 | -LRB- | denotes | ( |
T754 | 201-208 | NN | denotes | cryo-EM |
T755 | 208-209 | -RRB- | denotes | ) |
R727 | T724 | T721 | arg2Of | proteins,of |
R728 | T724 | T722 | arg1Of | proteins,the |
R729 | T724 | T723 | arg1Of | proteins,S |
R732 | T728 | T726 | arg2Of | occluded,are |
R733 | T728 | T727 | arg1Of | occluded,not |
R734 | T731 | T728 | arg1Of | glycans,occluded |
R736 | T731 | T729 | arg2Of | glycans,by |
R737 | T731 | T730 | arg1Of | glycans,N-linked |
R738 | T746 | T732 | arg1Of | and,In |
R739 | T733 | T732 | arg2Of | addition,In |
R740 | T746 | T734 | arg1Of | and,"," |
R741 | T735 | T736 | arg1Of | we,compare |
R742 | T738 | T736 | arg2Of | structures,compare |
R743 | T738 | T737 | arg1Of | structures,the |
R744 | T738 | T739 | arg1Of | structures,of |
R745 | T743 | T739 | arg2Of | coats,of |
R746 | T743 | T740 | arg1Of | coats,the |
R747 | T743 | T741 | arg1Of | coats,respective |
R748 | T743 | T742 | arg1Of | coats,glycan |
R749 | T743 | T744 | arg1Of | coats,of |
R750 | T745 | T744 | arg2Of | SARS,of |
R751 | T736 | T746 | arg1Of | compare,and |
R753 | T749 | T747 | arg1Of | proteins,HIV-1 |
R754 | T749 | T748 | arg1Of | proteins,envelope |
R755 | T749 | T750 | arg1Of | proteins,using |
R757 | T752 | T751 | arg1Of | microscopy,cryo-electron |
R758 | T752 | T753 | arg1Of | microscopy,( |
R759 | T754 | T753 | arg2Of | cryo-EM,( |
R760 | T755 | T753 | arg3Of | ),( |
LitCovid-sample-PD-FMA
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T30 | 11-19 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T31 | 145-148 | Body_part | denotes | HIV | http://purl.org/sig/ont/fma/fma278683 |
T32 | 160-168 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-sample-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T33 | 11-19 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T34 | 54-61 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
T35 | 160-168 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sample-PD-NCBITaxon
Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
---|---|---|---|---|---|
T37 | 136-140 | Species | denotes | SARS | NCBItxid:694009 |
T38 | 145-150 | Species | denotes | HIV-1 | NCBItxid:11676 |
LitCovid-sample-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T21 | 136-140 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
181 | 45-61 | Chemical | denotes | N-linked glycans | |
182 | 120-126 | Chemical | denotes | glycan | MESH:D011134 |
192 | 136-140 | Disease | denotes | SARS | MESH:D045169 |
173 | 145-150 | Species | denotes | HIV-1 | Tax:11676 |
LitCovid-sample-UniProt
Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
---|---|---|---|---|---|
T1850 | 9-19 | Protein | denotes | S proteins | https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9 |
T1883 | 151-168 | Protein | denotes | envelope proteins | https://www.uniprot.org/uniprot/P24123|https://www.uniprot.org/uniprot/P0C782|https://www.uniprot.org/uniprot/P0C781|https://www.uniprot.org/uniprot/C1JJY3 |