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PMC:7253482 / 403-653 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
24 105-110 Gene denotes spike Gene:43740568
34 152-158 Chemical denotes glycan MESH:D011134
35 210-222 Chemical denotes oligomannose
36 228-234 Chemical denotes glycan MESH:D011134
42 170-174 Disease denotes MERS MESH:D018352

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T2 2-10 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T2 128-129 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T2 2-10 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T4 86-91 http://purl.obolibrary.org/obo/BFO_0000029 denotes sites

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T59 0-1 NN denotes S
T60 2-10 NNS denotes proteins
T61 11-14 VBP denotes are
T62 15-26 RB denotes extensively
T63 27-39 VBN denotes glycosylated
T64 39-40 -COMMA- denotes ,
T65 41-49 VBG denotes encoding
T66 50-56 IN denotes around
T67 57-62 CD denotes 66–87
T68 63-71 JJ denotes N-linked
T69 72-85 NN denotes glycosylation
T70 86-91 NNS denotes sites
T71 92-95 IN denotes per
T72 96-104 JJ denotes trimeric
T73 105-110 NN denotes spike
T74 112-116 RB denotes Here
T75 116-117 -COMMA- denotes ,
T76 118-120 PRP denotes we
T77 121-127 VBP denotes reveal
T78 128-129 DT denotes a
T79 130-138 JJ denotes specific
T80 139-143 NN denotes area
T81 144-146 IN denotes of
T82 147-151 JJ denotes high
T83 152-158 NN denotes glycan
T84 159-166 NN denotes density
T85 167-169 IN denotes on
T86 170-174 NNP denotes MERS
T87 175-176 NNP denotes S
T88 177-181 WDT denotes that
T89 182-189 VBZ denotes results
T90 190-192 IN denotes in
T91 193-196 DT denotes the
T92 197-206 NN denotes formation
T93 207-209 IN denotes of
T94 210-227 JJ denotes oligomannose-type
T95 228-234 NN denotes glycan
T96 235-243 NNS denotes clusters
T97 243-244 -COMMA- denotes ,
T98 245-250 WDT denotes which
R55 T60 T59 arg1Of proteins,S
R56 T60 T61 arg1Of proteins,are
R57 T63 T61 arg2Of glycosylated,are
R58 T63 T62 arg1Of glycosylated,extensively
R59 T60 T63 arg2Of proteins,glycosylated
R60 T63 T64 arg1Of glycosylated,","
R61 T60 T65 arg1Of proteins,encoding
R62 T70 T65 arg2Of sites,encoding
R63 T63 T65 modOf glycosylated,encoding
R64 T70 T66 arg1Of sites,around
R65 T70 T67 arg1Of sites,66–87
R66 T70 T68 arg1Of sites,N-linked
R67 T70 T69 arg1Of sites,glycosylation
R68 T70 T71 arg1Of sites,per
R69 T73 T71 arg2Of spike,per
R70 T73 T72 arg1Of spike,trimeric
R71 T77 T74 arg1Of reveal,Here
R72 T77 T75 arg1Of reveal,","
R73 T76 T77 arg1Of we,reveal
R74 T80 T77 arg2Of area,reveal
R75 T80 T78 arg1Of area,a
R76 T80 T79 arg1Of area,specific
R77 T80 T81 arg1Of area,of
R78 T84 T81 arg2Of density,of
R79 T84 T82 arg1Of density,high
R80 T84 T83 arg1Of density,glycan
R81 T80 T85 arg1Of area,on
R82 T87 T85 arg2Of S,on
R83 T87 T86 arg1Of S,MERS
R84 T80 T88 arg1Of area,that
R85 T80 T89 arg1Of area,results
R86 T89 T90 arg1Of results,in
R87 T92 T90 arg2Of formation,in
R88 T92 T91 arg1Of formation,the
R89 T92 T93 arg1Of formation,of
R90 T96 T93 arg2Of clusters,of
R91 T96 T94 arg1Of clusters,oligomannose-type
R92 T96 T95 arg1Of clusters,glycan
R93 T96 T97 arg1Of clusters,","
R94 T96 T98 arg1Of clusters,which

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T2 2-10 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T2 2-10 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T4 170-174 Species denotes MERS NCBItxid:1335626

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
24 105-110 Gene denotes spike Gene:43740568
34 152-158 Chemical denotes glycan MESH:D011134
42 170-174 Disease denotes MERS MESH:D018352
35 210-222 Chemical denotes oligomannose
36 228-234 Chemical denotes glycan MESH:D011134

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T100 0-10 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T4 72-85 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 197-206 http://purl.obolibrary.org/obo/GO_0009058 denotes formation

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T4 72-85 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 197-206 http://purl.obolibrary.org/obo/GO_0009058 denotes formation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T4 63-85 http://purl.obolibrary.org/obo/GO_0006487 denotes N-linked glycosylation
T5 72-85 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T6 197-206 http://purl.obolibrary.org/obo/GO_0009058 denotes formation