PMC:7253482 / 391-514
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
24 | 117-122 | Gene | denotes | spike | Gene:43740568 |
27 | 0-11 | Species | denotes | Coronavirus | Tax:11118 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T2 | 14-22 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T2 | 14-22 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sample-PD-IDO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4 | 98-103 | http://purl.obolibrary.org/obo/BFO_0000029 | denotes | sites |
LitCovid-sample-Enju
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T58 | 0-11 | NN | denotes | Coronavirus |
T59 | 12-13 | NN | denotes | S |
T60 | 14-22 | NNS | denotes | proteins |
T61 | 23-26 | VBP | denotes | are |
T62 | 27-38 | RB | denotes | extensively |
T63 | 39-51 | VBN | denotes | glycosylated |
T64 | 51-52 | -COMMA- | denotes | , |
T65 | 53-61 | VBG | denotes | encoding |
T66 | 62-68 | IN | denotes | around |
T67 | 69-74 | CD | denotes | 66–87 |
T68 | 75-83 | JJ | denotes | N-linked |
T69 | 84-97 | NN | denotes | glycosylation |
T70 | 98-103 | NNS | denotes | sites |
T71 | 104-107 | IN | denotes | per |
T72 | 108-116 | JJ | denotes | trimeric |
T73 | 117-122 | NN | denotes | spike |
R54 | T60 | T58 | arg1Of | proteins,Coronavirus |
R55 | T60 | T59 | arg1Of | proteins,S |
R56 | T60 | T61 | arg1Of | proteins,are |
R57 | T63 | T61 | arg2Of | glycosylated,are |
R58 | T63 | T62 | arg1Of | glycosylated,extensively |
R59 | T60 | T63 | arg2Of | proteins,glycosylated |
R60 | T63 | T64 | arg1Of | glycosylated,"," |
R61 | T60 | T65 | arg1Of | proteins,encoding |
R62 | T70 | T65 | arg2Of | sites,encoding |
R63 | T63 | T65 | modOf | glycosylated,encoding |
R64 | T70 | T66 | arg1Of | sites,around |
R65 | T70 | T67 | arg1Of | sites,66–87 |
R66 | T70 | T68 | arg1Of | sites,N-linked |
R67 | T70 | T69 | arg1Of | sites,glycosylation |
R68 | T70 | T71 | arg1Of | sites,per |
R69 | T73 | T71 | arg2Of | spike,per |
R70 | T73 | T72 | arg1Of | spike,trimeric |
LitCovid-sample-PD-FMA
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T2 | 14-22 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-sample-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T2 | 14-22 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sample-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5 | 0-123 | Sentence | denotes | Coronavirus S proteins are extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike. |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
27 | 0-11 | Species | denotes | Coronavirus | Tax:11118 |
24 | 117-122 | Gene | denotes | spike | Gene:43740568 |
LitCovid-sample-UniProt
Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
---|---|---|---|---|---|
T100 | 12-22 | Protein | denotes | S proteins | https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9 |
LitCovid-sample-PD-GO-BP-0
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4 | 84-97 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
LitCovid-sample-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4 | 84-97 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4 | 75-97 | http://purl.obolibrary.org/obo/GO_0006487 | denotes | N-linked glycosylation |
T5 | 84-97 | http://purl.obolibrary.org/obo/GO_0070085 | denotes | glycosylation |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T5 | 0-123 | Sentence | denotes | Coronavirus S proteins are extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike. |