> top > docs > PMC:7253482 > spans > 390-640 > annotations

PMC:7253482 / 390-640 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
24 118-123 Gene denotes spike Gene:43740568
27 1-12 Species denotes Coronavirus Tax:11118
34 165-171 Chemical denotes glycan MESH:D011134
35 223-235 Chemical denotes oligomannose
36 241-247 Chemical denotes glycan MESH:D011134
42 183-187 Disease denotes MERS MESH:D018352

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T2 15-23 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T2 141-142 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T2 15-23 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T4 99-104 http://purl.obolibrary.org/obo/BFO_0000029 denotes sites

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T58 1-12 NN denotes Coronavirus
T59 13-14 NN denotes S
T60 15-23 NNS denotes proteins
T61 24-27 VBP denotes are
T62 28-39 RB denotes extensively
T63 40-52 VBN denotes glycosylated
T64 52-53 -COMMA- denotes ,
T65 54-62 VBG denotes encoding
T66 63-69 IN denotes around
T67 70-75 CD denotes 66–87
T68 76-84 JJ denotes N-linked
T69 85-98 NN denotes glycosylation
T70 99-104 NNS denotes sites
T71 105-108 IN denotes per
T72 109-117 JJ denotes trimeric
T73 118-123 NN denotes spike
T74 125-129 RB denotes Here
T75 129-130 -COMMA- denotes ,
T76 131-133 PRP denotes we
T77 134-140 VBP denotes reveal
T78 141-142 DT denotes a
T79 143-151 JJ denotes specific
T80 152-156 NN denotes area
T81 157-159 IN denotes of
T82 160-164 JJ denotes high
T83 165-171 NN denotes glycan
T84 172-179 NN denotes density
T85 180-182 IN denotes on
T86 183-187 NNP denotes MERS
T87 188-189 NNP denotes S
T88 190-194 WDT denotes that
T89 195-202 VBZ denotes results
T90 203-205 IN denotes in
T91 206-209 DT denotes the
T92 210-219 NN denotes formation
T93 220-222 IN denotes of
T94 223-240 JJ denotes oligomannose-type
T95 241-247 NN denotes glycan
R54 T60 T58 arg1Of proteins,Coronavirus
R55 T60 T59 arg1Of proteins,S
R56 T60 T61 arg1Of proteins,are
R57 T63 T61 arg2Of glycosylated,are
R58 T63 T62 arg1Of glycosylated,extensively
R59 T60 T63 arg2Of proteins,glycosylated
R60 T63 T64 arg1Of glycosylated,","
R61 T60 T65 arg1Of proteins,encoding
R62 T70 T65 arg2Of sites,encoding
R63 T63 T65 modOf glycosylated,encoding
R64 T70 T66 arg1Of sites,around
R65 T70 T67 arg1Of sites,66–87
R66 T70 T68 arg1Of sites,N-linked
R67 T70 T69 arg1Of sites,glycosylation
R68 T70 T71 arg1Of sites,per
R69 T73 T71 arg2Of spike,per
R70 T73 T72 arg1Of spike,trimeric
R71 T77 T74 arg1Of reveal,Here
R72 T77 T75 arg1Of reveal,","
R73 T76 T77 arg1Of we,reveal
R74 T80 T77 arg2Of area,reveal
R75 T80 T78 arg1Of area,a
R76 T80 T79 arg1Of area,specific
R77 T80 T81 arg1Of area,of
R78 T84 T81 arg2Of density,of
R79 T84 T82 arg1Of density,high
R80 T84 T83 arg1Of density,glycan
R81 T80 T85 arg1Of area,on
R82 T87 T85 arg2Of S,on
R83 T87 T86 arg1Of S,MERS
R84 T80 T88 arg1Of area,that
R85 T80 T89 arg1Of area,results
R86 T89 T90 arg1Of results,in
R87 T92 T90 arg2Of formation,in
R88 T92 T91 arg1Of formation,the
R89 T92 T93 arg1Of formation,of

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T2 15-23 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T2 15-23 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T4 183-187 Species denotes MERS NCBItxid:1335626

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T5 1-124 Sentence denotes Coronavirus S proteins are extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike.

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
27 1-12 Species denotes Coronavirus Tax:11118
24 118-123 Gene denotes spike Gene:43740568
34 165-171 Chemical denotes glycan MESH:D011134
42 183-187 Disease denotes MERS MESH:D018352
35 223-235 Chemical denotes oligomannose
36 241-247 Chemical denotes glycan MESH:D011134

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T100 13-23 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T4 85-98 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 210-219 http://purl.obolibrary.org/obo/GO_0009058 denotes formation

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T4 85-98 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T5 210-219 http://purl.obolibrary.org/obo/GO_0009058 denotes formation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T4 76-98 http://purl.obolibrary.org/obo/GO_0006487 denotes N-linked glycosylation
T5 85-98 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T6 210-219 http://purl.obolibrary.org/obo/GO_0009058 denotes formation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T5 1-124 Sentence denotes Coronavirus S proteins are extensively glycosylated, encoding around 66–87 N-linked glycosylation sites per trimeric spike.