PMC:7253482 / 3292-4197
Annnotations
LitCovid-PubTator
| Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
|---|---|---|---|---|---|
| 137 | 27-33 | Chemical | denotes | glycan | MESH:D011134 |
| 138 | 87-99 | Chemical | denotes | oligomannose | |
| 139 | 105-112 | Chemical | denotes | glycans | MESH:D011134 |
| 140 | 183-189 | Chemical | denotes | glycan | MESH:D011134 |
| 141 | 222-229 | Chemical | denotes | glycans | MESH:D011134 |
| 142 | 367-374 | Chemical | denotes | glycans | MESH:D011134 |
| 143 | 411-417 | Chemical | denotes | glycan | MESH:D011134 |
| 144 | 489-495 | Chemical | denotes | glycan | MESH:D011134 |
| 145 | 516-522 | Chemical | denotes | glycan | MESH:D011134 |
| 146 | 583-589 | Chemical | denotes | Glycan | MESH:D011134 |
| 147 | 745-751 | Chemical | denotes | glycan | MESH:D011134 |
LitCovid-PD-FMA-UBERON
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T23 | 265-277 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T24 | 457-464 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T25 | 612-625 | Body_part | denotes | glycoproteins | http://purl.org/sig/ont/fma/fma62925 |
| T26 | 685-692 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-PD-CLO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T24 | 278-281 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T25 | 324-325 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T26 | 380-382 | http://purl.obolibrary.org/obo/CLO_0001302 | denotes | 34 |
| T27 | 626-629 | http://purl.obolibrary.org/obo/CLO_0051582 | denotes | has |
| T28 | 652-653 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
| T29 | 766-767 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
LitCovid-PD-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T22 | 105-112 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T23 | 265-277 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T24 | 457-464 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T25 | 583-589 | Chemical | denotes | Glycan | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T26 | 612-625 | Chemical | denotes | glycoproteins | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T27 | 685-692 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T28 | 715-724 | Chemical | denotes | immunogen | http://purl.obolibrary.org/obo/CHEBI_60816 |
| T29 | 779-788 | Chemical | denotes | immunogen | http://purl.obolibrary.org/obo/CHEBI_60816 |
LitCovid-sample-PD-IDO
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T18 | 354-358 | http://purl.obolibrary.org/obo/IDO_0000531 | denotes | host |
| T19 | 418-423 | http://purl.obolibrary.org/obo/BFO_0000029 | denotes | sites |
LitCovid-sample-Enju
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T507 | 0-8 | JJ | denotes | Previous |
| T508 | 9-17 | NNS | denotes | analyses |
| T509 | 18-20 | IN | denotes | of |
| T510 | 21-26 | JJ | denotes | viral |
| T511 | 27-33 | NN | denotes | glycan |
| T512 | 34-41 | NNS | denotes | shields |
| T513 | 42-46 | VBP | denotes | have |
| T514 | 47-55 | VBN | denotes | revealed |
| T515 | 56-59 | DT | denotes | the |
| T516 | 60-68 | NN | denotes | presence |
| T517 | 69-71 | IN | denotes | of |
| T518 | 72-86 | JJ | denotes | underprocessed |
| T519 | 87-104 | JJ | denotes | oligomannose-type |
| T520 | 105-112 | NNS | denotes | glycans |
| T521 | 113-117 | WDT | denotes | that |
| T522 | 118-127 | RB | denotes | seemingly |
| T523 | 128-133 | VBP | denotes | arise |
| T524 | 134-137 | JJ | denotes | due |
| T525 | 138-140 | TO | denotes | to |
| T526 | 141-147 | JJ | denotes | steric |
| T527 | 148-159 | NNS | denotes | constraints |
| T528 | 160-164 | WDT | denotes | that |
| T529 | 165-172 | VBP | denotes | prevent |
| T530 | 173-179 | NN | denotes | access |
| T531 | 180-182 | IN | denotes | of |
| T532 | 183-189 | NN | denotes | glycan |
| T533 | 190-200 | NN | denotes | processing |
| T534 | 201-208 | NNS | denotes | enzymes |
| T535 | 209-211 | TO | denotes | to |
| T536 | 212-221 | NN | denotes | substrate |
| T537 | 222-237 | NN | denotes | glycans24,27,28 |
| T538 | 237-238 | -COMMA- | denotes | , |
| T539 | 239-249 | RB | denotes | especially |
| T540 | 250-254 | WRB | denotes | when |
| T541 | 255-258 | DT | denotes | the |
| T542 | 259-264 | JJ | denotes | viral |
| T543 | 265-277 | NN | denotes | glycoprotein |
| T544 | 278-281 | VBZ | denotes | has |
| T545 | 282-289 | VBN | denotes | evolved |
| T546 | 290-292 | TO | denotes | to |
| T547 | 293-297 | VB | denotes | mask |
| T548 | 298-309 | JJ | denotes | immunogenic |
| T549 | 310-318 | NNS | denotes | epitopes |
| T550 | 319-323 | IN | denotes | with |
| T551 | 324-325 | DT | denotes | a |
| T552 | 326-338 | RB | denotes | particularly |
| T553 | 339-344 | JJ | denotes | dense |
| T554 | 345-350 | NN | denotes | array |
| T555 | 351-353 | IN | denotes | of |
| T556 | 354-366 | JJ | denotes | host-derived |
| T557 | 367-382 | NN | denotes | glycans26,29–34 |
| T558 | 384-394 | JJ | denotes | Restricted |
| T559 | 395-401 | NN | denotes | access |
| T560 | 402-404 | TO | denotes | to |
| T561 | 405-410 | DT | denotes | these |
| T562 | 411-417 | NN | denotes | glycan |
| T563 | 418-423 | NNS | denotes | sites |
| T564 | 424-426 | CC | denotes | or |
| T565 | 427-439 | NN | denotes | interference |
| T566 | 440-444 | IN | denotes | with |
| T567 | 445-456 | VBG | denotes | surrounding |
| T568 | 457-464 | NN | denotes | protein |
| T569 | 465-472 | NN | denotes | surface |
| T570 | 473-475 | CC | denotes | or |
| T571 | 476-488 | VBG | denotes | neighbouring |
| T572 | 489-495 | NN | denotes | glycan |
| T573 | 496-504 | NNS | denotes | residues |
| T574 | 505-508 | MD | denotes | can |
| T575 | 509-515 | VB | denotes | render |
| T576 | 516-522 | NN | denotes | glycan |
| T577 | 523-533 | NN | denotes | processing |
| T578 | 534-541 | NNS | denotes | enzymes |
| T579 | 542-553 | JJ | denotes | ineffective |
| T580 | 554-556 | IN | denotes | in |
| T581 | 557-565 | JJ | denotes | specific |
| T582 | 566-581 | NN | denotes | regions27,28,35 |
| T583 | 583-589 | NN | denotes | Glycan |
| T584 | 590-600 | NN | denotes | processing |
| T585 | 601-603 | IN | denotes | on |
| T586 | 604-611 | JJ | denotes | soluble |
| T587 | 612-625 | NNS | denotes | glycoproteins |
| T588 | 626-629 | VBZ | denotes | has |
| T589 | 630-634 | RB | denotes | also |
| T590 | 635-639 | VBN | denotes | been |
| T591 | 640-645 | VBN | denotes | shown |
| T592 | 646-648 | TO | denotes | to |
| T593 | 649-651 | VB | denotes | be |
| T594 | 652-653 | DT | denotes | a |
| T595 | 654-660 | JJ | denotes | strong |
| T596 | 661-669 | NN | denotes | reporter |
| T597 | 670-672 | IN | denotes | of |
| T598 | 673-684 | JJ | denotes | native-like |
| T599 | 685-692 | NN | denotes | protein |
| T600 | 693-705 | NN | denotes | architecture |
| T601 | 706-709 | CC | denotes | and |
| T602 | 710-714 | RB | denotes | thus |
| T603 | 715-724 | NN | denotes | immunogen |
| T604 | 725-739 | NN | denotes | integrity36–38 |
| T605 | 739-740 | -SEMICOLON- | denotes | ; |
| T606 | 741-744 | CC | denotes | and |
| T607 | 745-751 | NN | denotes | glycan |
| T608 | 752-762 | NN | denotes | processing |
| T609 | 763-765 | IN | denotes | on |
| T610 | 766-767 | DT | denotes | a |
| T611 | 768-778 | JJ | denotes | successful |
| T612 | 779-788 | NN | denotes | immunogen |
| T613 | 789-798 | NN | denotes | candidate |
| T614 | 799-805 | MD | denotes | should |
| T615 | 806-815 | RB | denotes | therefore |
| T616 | 816-821 | VB | denotes | mimic |
| T617 | 821-822 | -COMMA- | denotes | , |
| T618 | 823-825 | RB | denotes | as |
| T619 | 826-833 | RB | denotes | closely |
| T620 | 834-836 | IN | denotes | as |
| T621 | 837-845 | JJ | denotes | possible |
| T622 | 845-846 | -COMMA- | denotes | , |
| T623 | 847-850 | DT | denotes | the |
| T624 | 851-861 | JJ | denotes | structural |
| T625 | 862-870 | NNS | denotes | features |
| T626 | 871-879 | VBN | denotes | observed |
| T627 | 880-882 | IN | denotes | on |
| T628 | 883-886 | DT | denotes | the |
| T629 | 887-893 | JJ | denotes | native |
| T630 | 894-904 | NN | denotes | virus39,40 |
| R506 | T508 | T507 | arg1Of | analyses,Previous |
| R507 | T508 | T509 | arg1Of | analyses,of |
| R508 | T512 | T509 | arg2Of | shields,of |
| R509 | T512 | T510 | arg1Of | shields,viral |
| R510 | T512 | T511 | arg1Of | shields,glycan |
| R511 | T508 | T513 | arg1Of | analyses,have |
| R512 | T514 | T513 | arg2Of | revealed,have |
| R513 | T508 | T514 | arg1Of | analyses,revealed |
| R514 | T516 | T514 | arg2Of | presence,revealed |
| R515 | T516 | T515 | arg1Of | presence,the |
| R516 | T516 | T517 | arg1Of | presence,of |
| R517 | T520 | T517 | arg2Of | glycans,of |
| R518 | T520 | T518 | arg1Of | glycans,underprocessed |
| R519 | T520 | T519 | arg1Of | glycans,oligomannose-type |
| R520 | T520 | T521 | arg1Of | glycans,that |
| R521 | T523 | T522 | arg1Of | arise,seemingly |
| R522 | T520 | T523 | arg1Of | glycans,arise |
| R523 | T525 | T524 | arg1Of | to,due |
| R524 | T523 | T525 | arg1Of | arise,to |
| R525 | T527 | T525 | arg2Of | constraints,to |
| R526 | T527 | T526 | arg1Of | constraints,steric |
| R527 | T527 | T528 | arg1Of | constraints,that |
| R528 | T527 | T529 | arg1Of | constraints,prevent |
| R529 | T530 | T529 | arg2Of | access,prevent |
| R530 | T530 | T531 | arg1Of | access,of |
| R531 | T534 | T531 | arg2Of | enzymes,of |
| R532 | T534 | T532 | arg1Of | enzymes,glycan |
| R533 | T534 | T533 | arg1Of | enzymes,processing |
| R534 | T530 | T535 | arg1Of | access,to |
| R535 | T537 | T535 | arg2Of | "glycans24,27,28",to |
| R536 | T537 | T536 | arg1Of | "glycans24,27,28",substrate |
| R537 | T523 | T538 | arg1Of | arise,"," |
| R538 | T523 | T539 | arg1Of | arise,especially |
| R539 | T545 | T539 | arg2Of | evolved,especially |
| R540 | T539 | T540 | arg1Of | especially,when |
| R541 | T543 | T541 | arg1Of | glycoprotein,the |
| R542 | T543 | T542 | arg1Of | glycoprotein,viral |
| R543 | T543 | T544 | arg1Of | glycoprotein,has |
| R544 | T545 | T544 | arg2Of | evolved,has |
| R545 | T543 | T545 | arg1Of | glycoprotein,evolved |
| R546 | T547 | T545 | arg2Of | mask,evolved |
| R547 | T547 | T546 | arg1Of | mask,to |
| R548 | T543 | T547 | arg1Of | glycoprotein,mask |
| R549 | T549 | T547 | arg2Of | epitopes,mask |
| R550 | T549 | T548 | arg1Of | epitopes,immunogenic |
| R551 | T547 | T550 | arg1Of | mask,with |
| R552 | T554 | T550 | arg2Of | array,with |
| R553 | T554 | T551 | arg1Of | array,a |
| R554 | T553 | T552 | arg1Of | dense,particularly |
| R555 | T554 | T553 | arg1Of | array,dense |
| R556 | T554 | T555 | arg1Of | array,of |
| R557 | T557 | T555 | arg2Of | "glycans26,29–34",of |
| R558 | T557 | T556 | arg1Of | "glycans26,29–34",host-derived |
| R559 | T559 | T558 | arg1Of | access,Restricted |
| R560 | T559 | T560 | arg1Of | access,to |
| R561 | T563 | T560 | arg2Of | sites,to |
| R562 | T563 | T561 | arg1Of | sites,these |
| R563 | T563 | T562 | arg1Of | sites,glycan |
| R564 | T559 | T564 | arg1Of | access,or |
| R565 | T565 | T564 | arg2Of | interference,or |
| R566 | T565 | T566 | arg1Of | interference,with |
| R567 | T570 | T566 | arg2Of | or,with |
| R568 | T569 | T567 | arg1Of | surface,surrounding |
| R569 | T569 | T568 | arg1Of | surface,protein |
| R570 | T569 | T570 | arg1Of | surface,or |
| R571 | T573 | T570 | arg2Of | residues,or |
| R572 | T573 | T571 | arg1Of | residues,neighbouring |
| R573 | T573 | T572 | arg1Of | residues,glycan |
| R574 | T564 | T574 | arg1Of | or,can |
| R575 | T575 | T574 | arg2Of | render,can |
| R576 | T564 | T575 | arg1Of | or,render |
| R577 | T578 | T575 | arg2Of | enzymes,render |
| R578 | T578 | T576 | arg1Of | enzymes,glycan |
| R579 | T578 | T577 | arg1Of | enzymes,processing |
| R580 | T578 | T579 | arg1Of | enzymes,ineffective |
| R581 | T579 | T580 | arg1Of | ineffective,in |
| R582 | T582 | T580 | arg2Of | "regions27,28,35",in |
| R583 | T582 | T581 | arg1Of | "regions27,28,35",specific |
| R584 | T584 | T583 | arg1Of | processing,Glycan |
| R585 | T584 | T585 | arg1Of | processing,on |
| R586 | T587 | T585 | arg2Of | glycoproteins,on |
| R587 | T587 | T586 | arg1Of | glycoproteins,soluble |
| R588 | T584 | T588 | arg1Of | processing,has |
| R589 | T591 | T588 | arg2Of | shown,has |
| R590 | T591 | T589 | arg1Of | shown,also |
| R591 | T584 | T590 | arg1Of | processing,been |
| R592 | T591 | T590 | arg2Of | shown,been |
| R593 | T584 | T591 | arg2Of | processing,shown |
| R594 | T593 | T591 | arg3Of | be,shown |
| R595 | T593 | T592 | arg1Of | be,to |
| R596 | T584 | T593 | arg1Of | processing,be |
| R597 | T596 | T593 | arg2Of | reporter,be |
| R598 | T596 | T594 | arg1Of | reporter,a |
| R599 | T596 | T595 | arg1Of | reporter,strong |
| R600 | T596 | T597 | arg1Of | reporter,of |
| R601 | T600 | T597 | arg2Of | architecture,of |
| R602 | T600 | T598 | arg1Of | architecture,native-like |
| R603 | T600 | T599 | arg1Of | architecture,protein |
| R604 | T591 | T601 | arg1Of | shown,and |
| R605 | T616 | T601 | arg2Of | mimic,and |
| R606 | T616 | T602 | arg1Of | mimic,thus |
| R607 | T604 | T603 | arg1Of | integrity36–38,immunogen |
| R608 | T606 | T605 | arg1Of | and,; |
| R609 | T604 | T606 | arg1Of | integrity36–38,and |
| R610 | T608 | T606 | arg2Of | processing,and |
| R611 | T608 | T607 | arg1Of | processing,glycan |
| R612 | T606 | T609 | arg1Of | and,on |
| R613 | T613 | T609 | arg2Of | candidate,on |
| R614 | T613 | T610 | arg1Of | candidate,a |
| R615 | T613 | T611 | arg1Of | candidate,successful |
| R616 | T613 | T612 | arg1Of | candidate,immunogen |
| R617 | T606 | T614 | arg1Of | and,should |
| R618 | T616 | T614 | arg2Of | mimic,should |
| R619 | T616 | T615 | arg1Of | mimic,therefore |
| R620 | T606 | T616 | arg1Of | and,mimic |
| R621 | T625 | T616 | arg2Of | features,mimic |
| R622 | T616 | T617 | arg1Of | mimic,"," |
| R623 | T619 | T618 | arg1Of | closely,as |
| R624 | T616 | T619 | arg1Of | mimic,closely |
| R625 | T619 | T620 | arg1Of | closely,as |
| R626 | T621 | T620 | arg2Of | possible,as |
| R627 | T616 | T622 | arg1Of | mimic,"," |
| R628 | T625 | T623 | arg1Of | features,the |
| R629 | T625 | T624 | arg1Of | features,structural |
| R630 | T625 | T626 | arg2Of | features,observed |
| R631 | T626 | T627 | arg1Of | observed,on |
| R632 | T630 | T627 | arg2Of | "virus39,40",on |
| R633 | T630 | T628 | arg1Of | "virus39,40",the |
| R634 | T630 | T629 | arg1Of | "virus39,40",native |
LitCovid-sample-PD-FMA
| Id | Subject | Object | Predicate | Lexical cue | fma_id |
|---|---|---|---|---|---|
| T23 | 265-277 | Body_part | denotes | glycoprotein | http://purl.org/sig/ont/fma/fma62925 |
| T24 | 457-464 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
| T25 | 612-625 | Body_part | denotes | glycoproteins | http://purl.org/sig/ont/fma/fma62925 |
| T26 | 685-692 | Body_part | denotes | protein | http://purl.org/sig/ont/fma/fma67257 |
LitCovid-sample-CHEBI
| Id | Subject | Object | Predicate | Lexical cue | chebi_id |
|---|---|---|---|---|---|
| T20 | 105-112 | Chemical | denotes | glycans | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T21 | 265-277 | Chemical | denotes | glycoprotein | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T22 | 457-464 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
| T23 | 583-589 | Chemical | denotes | Glycan | http://purl.obolibrary.org/obo/CHEBI_18154 |
| T24 | 612-625 | Chemical | denotes | glycoproteins | http://purl.obolibrary.org/obo/CHEBI_17089 |
| T25 | 685-692 | Chemical | denotes | protein | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sample-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T21 | 0-383 | Sentence | denotes | Previous analyses of viral glycan shields have revealed the presence of underprocessed oligomannose-type glycans that seemingly arise due to steric constraints that prevent access of glycan processing enzymes to substrate glycans24,27,28, especially when the viral glycoprotein has evolved to mask immunogenic epitopes with a particularly dense array of host-derived glycans26,29–34. |
| T22 | 384-582 | Sentence | denotes | Restricted access to these glycan sites or interference with surrounding protein surface or neighbouring glycan residues can render glycan processing enzymes ineffective in specific regions27,28,35. |
| T23 | 583-905 | Sentence | denotes | Glycan processing on soluble glycoproteins has also been shown to be a strong reporter of native-like protein architecture and thus immunogen integrity36–38; and glycan processing on a successful immunogen candidate should therefore mimic, as closely as possible, the structural features observed on the native virus39,40. |
LitCovid-sample-Pubtator
| Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
|---|---|---|---|---|---|
| 137 | 27-33 | Chemical | denotes | glycan | MESH:D011134 |
| 138 | 87-99 | Chemical | denotes | oligomannose | |
| 139 | 105-112 | Chemical | denotes | glycans | MESH:D011134 |
| 140 | 183-189 | Chemical | denotes | glycan | MESH:D011134 |
| 141 | 222-229 | Chemical | denotes | glycans | MESH:D011134 |
| 142 | 367-374 | Chemical | denotes | glycans | MESH:D011134 |
| 143 | 411-417 | Chemical | denotes | glycan | MESH:D011134 |
| 144 | 489-495 | Chemical | denotes | glycan | MESH:D011134 |
| 145 | 516-522 | Chemical | denotes | glycan | MESH:D011134 |
| 146 | 583-589 | Chemical | denotes | Glycan | MESH:D011134 |
| 147 | 745-751 | Chemical | denotes | glycan | MESH:D011134 |
LitCovid-sample-UniProt
| Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
|---|---|---|---|---|---|
| T1548 | 265-277 | Protein | denotes | glycoprotein | https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8 |
| T1633 | 612-625 | Protein | denotes | glycoproteins | https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8 |
LitCovid-sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T21 | 0-383 | Sentence | denotes | Previous analyses of viral glycan shields have revealed the presence of underprocessed oligomannose-type glycans that seemingly arise due to steric constraints that prevent access of glycan processing enzymes to substrate glycans24,27,28, especially when the viral glycoprotein has evolved to mask immunogenic epitopes with a particularly dense array of host-derived glycans26,29–34. |
| T22 | 384-582 | Sentence | denotes | Restricted access to these glycan sites or interference with surrounding protein surface or neighbouring glycan residues can render glycan processing enzymes ineffective in specific regions27,28,35. |
| T23 | 583-905 | Sentence | denotes | Glycan processing on soluble glycoproteins has also been shown to be a strong reporter of native-like protein architecture and thus immunogen integrity36–38; and glycan processing on a successful immunogen candidate should therefore mimic, as closely as possible, the structural features observed on the native virus39,40. |