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PMC:7253482 / 2971-3191 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
107 204-220 Gene denotes envelope protein Gene:64006
116 198-203 Species denotes HIV-1 Tax:11676
120 38-45 Chemical denotes glycans MESH:D011134
121 111-117 Chemical denotes glycan MESH:D011134

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T19 175-188 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T20 198-201 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T21 213-220 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T21 48-50 http://purl.obolibrary.org/obo/CLO_0050510 denotes 18
T22 128-131 http://purl.obolibrary.org/obo/CLO_0051582 denotes has

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T18 175-188 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T19 213-220 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T16 25-29 http://purl.obolibrary.org/obo/IDO_0000531 denotes host

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T455 2-4 IN denotes by
T456 5-14 VBG denotes occluding
T457 15-19 PRP denotes them
T458 20-24 IN denotes with
T459 25-37 JJ denotes host-derived
T460 38-50 NN denotes glycans16–18
T461 52-56 DT denotes This
T462 57-67 NN denotes phenomenon
T463 68-70 IN denotes of
T464 71-77 JJ denotes immune
T465 78-85 NN denotes evasion
T466 86-88 IN denotes by
T467 89-98 JJ denotes molecular
T468 99-106 NN denotes mimicry
T469 107-110 CC denotes and
T470 111-117 NN denotes glycan
T471 118-127 NN denotes shielding
T472 128-131 VBZ denotes has
T473 132-136 VBN denotes been
T474 137-141 RB denotes well
T475 142-155 VBN denotes characterised
T476 156-162 IN denotes across
T477 163-168 JJ denotes other
T478 169-174 JJ denotes viral
T479 175-188 NNS denotes glycoproteins
T480 188-189 -COMMA- denotes ,
T481 190-194 JJ denotes such
T482 195-197 IN denotes as
T483 198-203 NN denotes HIV-1
T484 204-212 NN denotes envelope
T485 213-220 NN denotes protein
R452 T456 T455 arg2Of occluding,by
R454 T457 T456 arg2Of them,occluding
R455 T456 T458 arg1Of occluding,with
R456 T460 T458 arg2Of glycans16–18,with
R457 T460 T459 arg1Of glycans16–18,host-derived
R458 T462 T461 arg1Of phenomenon,This
R459 T462 T463 arg1Of phenomenon,of
R460 T465 T463 arg2Of evasion,of
R461 T465 T464 arg1Of evasion,immune
R462 T462 T466 arg1Of phenomenon,by
R463 T469 T466 arg2Of and,by
R464 T468 T467 arg1Of mimicry,molecular
R465 T468 T469 arg1Of mimicry,and
R466 T471 T469 arg2Of shielding,and
R467 T471 T470 arg1Of shielding,glycan
R468 T462 T472 arg1Of phenomenon,has
R469 T475 T472 arg2Of characterised,has
R470 T462 T473 arg1Of phenomenon,been
R471 T475 T473 arg2Of characterised,been
R472 T475 T474 arg1Of characterised,well
R473 T462 T475 arg2Of phenomenon,characterised
R474 T475 T476 arg1Of characterised,across
R475 T479 T476 arg2Of glycoproteins,across
R476 T479 T477 arg1Of glycoproteins,other
R477 T479 T478 arg1Of glycoproteins,viral
R478 T479 T480 arg1Of glycoproteins,","
R479 T482 T481 arg1Of as,such
R480 T479 T482 arg1Of glycoproteins,as
R482 T485 T483 arg1Of protein,HIV-1
R483 T485 T484 arg1Of protein,envelope

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T19 175-188 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T20 198-201 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T21 213-220 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T17 175-188 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T18 213-220 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T28 198-203 Species denotes HIV-1 NCBItxid:11676

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
120 38-45 Chemical denotes glycans MESH:D011134
121 111-117 Chemical denotes glycan MESH:D011134
116 198-203 Species denotes HIV-1 Tax:11676
107 204-220 Gene denotes envelope protein Gene:64006

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T940 175-188 Protein denotes glycoproteins https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8
T1025 204-220 Protein denotes envelope protein https://www.uniprot.org/uniprot/P24123|https://www.uniprot.org/uniprot/P0C782|https://www.uniprot.org/uniprot/P0C781|https://www.uniprot.org/uniprot/C1JJY3

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T12 71-85 http://purl.obolibrary.org/obo/GO_0020012 denotes immune evasion
T13 71-85 http://purl.obolibrary.org/obo/GO_0051805 denotes immune evasion

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T11 71-85 http://purl.obolibrary.org/obo/GO_0042783 denotes immune evasion

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T12 71-85 http://purl.obolibrary.org/obo/GO_0042783 denotes immune evasion