> top > docs > PMC:7253482 > spans > 28291-29088 > annotations

PMC:7253482 / 28291-29088 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
903 0-6 Chemical denotes Glycan MESH:D011134
910 39-46 Chemical denotes glycans MESH:D011134
911 93-103 Chemical denotes BEH Glycan
912 577-589 Chemical denotes oligomannose
913 595-602 Chemical denotes glycans MESH:D011134
914 655-662 Chemical denotes glycans MESH:D011134
915 697-701 Chemical denotes PVDF MESH:C024865

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T155 702-709 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T189 30-38 http://purl.obolibrary.org/obo/CLO_0007225 denotes Labelled
T190 67-68 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T191 147-157 http://purl.obolibrary.org/obo/OBI_0000968 denotes instrument
T192 290-292 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T193 294-295 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T194 301-302 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T195 345-346 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T196 354-355 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T197 385-386 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T198 391-392 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T199 423-424 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T200 429-430 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T201 456-458 http://purl.obolibrary.org/obo/CLO_0050507 denotes 22
T202 460-461 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T203 467-468 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T204 497-498 http://purl.obolibrary.org/obo/CLO_0001020 denotes A
T205 539-540 http://purl.obolibrary.org/obo/CLO_0001021 denotes B
T206 646-654 http://purl.obolibrary.org/obo/CLO_0007225 denotes labelled
T207 695-696 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T208 718-726 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T278 0-6 Chemical denotes Glycan http://purl.obolibrary.org/obo/CHEBI_18154
T279 39-46 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T280 97-103 Chemical denotes Glycan http://purl.obolibrary.org/obo/CHEBI_18154
T281 489-496 Chemical denotes solvent http://purl.obolibrary.org/obo/CHEBI_46787
T282 509-525 Chemical denotes ammonium formate http://purl.obolibrary.org/obo/CHEBI_63050
T283 509-517 Chemical denotes ammonium http://purl.obolibrary.org/obo/CHEBI_28938
T284 518-525 Chemical denotes formate http://purl.obolibrary.org/obo/CHEBI_15740|http://purl.obolibrary.org/obo/CHEBI_52343
T286 545-557 Chemical denotes acetonitrile http://purl.obolibrary.org/obo/CHEBI_38472
T287 595-602 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T288 655-662 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T289 702-709 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T154 702-709 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T191 0-6 Chemical denotes Glycan http://purl.obolibrary.org/obo/CHEBI_18154
T192 39-46 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T193 97-103 Chemical denotes Glycan http://purl.obolibrary.org/obo/CHEBI_18154
T194 509-525 Chemical denotes ammonium formate http://purl.obolibrary.org/obo/CHEBI_63050
T195 545-557 Chemical denotes acetonitrile http://purl.obolibrary.org/obo/CHEBI_38472
T196 595-602 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T197 655-662 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T198 702-709 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T160 0-29 Sentence denotes Glycan analysis by HILIC-UPLC
T161 30-242 Sentence denotes Labelled glycans were analysed using a 2.1 mm × 150 mm Acquity BEH Glycan column (Waters) on an Acquity H-Class UPLC instrument (Waters), with fluorescence measurements occurring at λex = 310 nm and λem = 370 nm.
T162 243-289 Sentence denotes The following gradient was used: time (t) = 0:
T163 290-338 Sentence denotes 22% A, 78% B (flow rate = 0.5 mL/min); t = 38.5:
T164 339-379 Sentence denotes 44.1% A, 55.9% B (0.5 mL/min); t = 39.5:
T165 380-417 Sentence denotes 100% A, 0% B (0.25 mL/min); t = 44.5:
T166 418-455 Sentence denotes 100% A, 0% B (0.25 mL/min); t = 46.5:
T167 456-558 Sentence denotes 22% A, 78% B (0.5 mL/min), where solvent A was 50 mM ammonium formate (pH 4.4) and B was acetonitrile.
T168 559-739 Sentence denotes Quantification of oligomannose-type glycans was achieved by digestion of fluorescently labelled glycans with Endo H, and clean-up using a PVDF protein-binding membrane (Millipore).
T169 740-797 Sentence denotes Empower 3 software (Waters) was used for data processing.

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
903 0-6 Chemical denotes Glycan MESH:D011134
911 93-103 Chemical denotes BEH Glycan
912 577-589 Chemical denotes oligomannose
913 595-602 Chemical denotes glycans MESH:D011134
914 655-662 Chemical denotes glycans MESH:D011134
915 697-701 Chemical denotes PVDF MESH:C024865

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T58 619-628 http://purl.obolibrary.org/obo/GO_0007586 denotes digestion

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T51 619-628 http://purl.obolibrary.org/obo/GO_0007586 denotes digestion

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T56 619-628 http://purl.obolibrary.org/obo/GO_0007586 denotes digestion

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T160 0-29 Sentence denotes Glycan analysis by HILIC-UPLC
T161 30-242 Sentence denotes Labelled glycans were analysed using a 2.1 mm × 150 mm Acquity BEH Glycan column (Waters) on an Acquity H-Class UPLC instrument (Waters), with fluorescence measurements occurring at λex = 310 nm and λem = 370 nm.
T162 243-289 Sentence denotes The following gradient was used: time (t) = 0:
T163 290-338 Sentence denotes 22% A, 78% B (flow rate = 0.5 mL/min); t = 38.5:
T164 339-379 Sentence denotes 44.1% A, 55.9% B (0.5 mL/min); t = 39.5:
T165 380-417 Sentence denotes 100% A, 0% B (0.25 mL/min); t = 44.5:
T166 418-455 Sentence denotes 100% A, 0% B (0.25 mL/min); t = 46.5:
T167 456-558 Sentence denotes 22% A, 78% B (0.5 mL/min), where solvent A was 50 mM ammonium formate (pH 4.4) and B was acetonitrile.
T168 559-739 Sentence denotes Quantification of oligomannose-type glycans was achieved by digestion of fluorescently labelled glycans with Endo H, and clean-up using a PVDF protein-binding membrane (Millipore).
T169 740-797 Sentence denotes Empower 3 software (Waters) was used for data processing.