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PMC:7253482 / 2720-2970 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
112 114-119 Gene denotes spike Gene:43740568
115 125-135 Species denotes SARS-CoV-2 Tax:2697049
119 77-92 Chemical denotes N-linked glycan
124 30-34 Disease denotes SARS MESH:D045169
125 39-43 Disease denotes MERS MESH:D018352

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T16 46-59 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T17 200-207 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T15 30-34 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T16 125-133 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T17 125-129 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T16 46-59 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T17 200-207 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T14 150-155 http://purl.obolibrary.org/obo/BFO_0000029 denotes sites
T15 226-230 http://purl.obolibrary.org/obo/IDO_0000531 denotes host

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T420 11-23 VBN denotes glycosylated
T421 23-24 -COMMA- denotes ,
T422 25-29 IN denotes with
T423 30-34 NNP denotes SARS
T424 35-38 CC denotes and
T425 39-43 NNP denotes MERS
T426 44-45 NN denotes S
T427 46-59 NNS denotes glycoproteins
T428 60-64 CC denotes both
T429 65-73 VBG denotes encoding
T430 74-76 CD denotes 69
T431 77-85 JJ denotes N-linked
T432 86-92 NN denotes glycan
T433 93-100 NNS denotes sequons
T434 101-104 IN denotes per
T435 105-113 JJ denotes trimeric
T436 114-119 NN denotes spike
T437 120-124 IN denotes with
T438 125-135 NN denotes SARS-CoV-2
T439 136-146 VBG denotes containing
T440 147-149 CD denotes 66
T441 150-155 NNS denotes sites
T442 157-162 DT denotes These
T443 163-176 NNS denotes modifications
T444 177-182 RB denotes often
T445 183-187 VBP denotes mask
T446 188-199 JJ denotes immunogenic
T447 200-207 NN denotes protein
T448 208-216 NNS denotes epitopes
T449 217-221 IN denotes from
T450 222-225 DT denotes the
T451 226-230 NN denotes host
T452 231-238 JJ denotes humoral
T453 239-245 JJ denotes immune
R417 T420 T421 arg1Of glycosylated,","
R418 T420 T422 arg1Of glycosylated,with
R419 T427 T422 arg2Of glycoproteins,with
R420 T427 T423 arg1Of glycoproteins,SARS
R421 T423 T424 arg1Of SARS,and
R422 T425 T424 arg2Of MERS,and
R423 T427 T425 arg1Of glycoproteins,MERS
R424 T427 T426 arg1Of glycoproteins,S
R425 T429 T428 arg1Of encoding,both
R426 T427 T429 arg1Of glycoproteins,encoding
R427 T433 T429 arg2Of sequons,encoding
R428 T433 T430 arg1Of sequons,69
R429 T433 T431 arg1Of sequons,N-linked
R430 T433 T432 arg1Of sequons,glycan
R431 T433 T434 arg1Of sequons,per
R432 T436 T434 arg2Of spike,per
R433 T436 T435 arg1Of spike,trimeric
R434 T436 T437 arg1Of spike,with
R435 T438 T437 arg2Of SARS-CoV-2,with
R436 T438 T439 arg1Of SARS-CoV-2,containing
R437 T441 T439 arg2Of sites,containing
R438 T441 T440 arg1Of sites,66
R439 T443 T442 arg1Of modifications,These
R440 T445 T444 arg1Of mask,often
R441 T443 T445 arg1Of modifications,mask
R442 T448 T445 arg2Of epitopes,mask
R443 T448 T446 arg1Of epitopes,immunogenic
R444 T448 T447 arg1Of epitopes,protein
R445 T448 T449 arg1Of epitopes,from

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T16 46-59 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T17 200-207 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T15 46-59 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T16 200-207 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T24 30-34 Species denotes SARS NCBItxid:694009
T25 39-43 Species denotes MERS NCBItxid:1335626
T26 125-135 Species denotes SARS-CoV-2 NCBItxid:2697049
T27 125-129 Species denotes SARS NCBItxid:694009

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T15 30-34 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T16 125-135 Disease denotes SARS-CoV-2 http://purl.obolibrary.org/obo/MONDO_0100096
T17 125-129 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
124 30-34 Disease denotes SARS MESH:D045169
125 39-43 Disease denotes MERS MESH:D018352
119 77-92 Chemical denotes N-linked glycan
112 114-119 Gene denotes spike Gene:43740568
115 125-135 Species denotes SARS-CoV-2 Tax:2697049

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T841 44-59 Protein denotes S glycoproteins https://www.uniprot.org/uniprot/Q9QAS2|https://www.uniprot.org/uniprot/Q9QAR5|https://www.uniprot.org/uniprot/Q9QAQ8|https://www.uniprot.org/uniprot/Q9IW04|https://www.uniprot.org/uniprot/Q9IKD1|https://www.uniprot.org/uniprot/Q990M4|https://www.uniprot.org/uniprot/Q990M3|https://www.uniprot.org/uniprot/Q990M2|https://www.uniprot.org/uniprot/Q990M1|https://www.uniprot.org/uniprot/Q91AV1|https://www.uniprot.org/uniprot/Q91A26|https://www.uniprot.org/uniprot/Q8V436|https://www.uniprot.org/uniprot/Q8JSP8|https://www.uniprot.org/uniprot/Q8BB25|https://www.uniprot.org/uniprot/Q86623|https://www.uniprot.org/uniprot/Q85088|https://www.uniprot.org/uniprot/Q85087|https://www.uniprot.org/uniprot/Q80BV6|https://www.uniprot.org/uniprot/Q7TFB1|https://www.uniprot.org/uniprot/Q7TFA2|https://www.uniprot.org/uniprot/Q7TA19|https://www.uniprot.org/uniprot/Q7T6T3|https://www.uniprot.org/uniprot/Q7T696|https://www.uniprot.org/uniprot/Q77NC4|https://www.uniprot.org/uniprot/Q6TNF9|https://www.uniprot.org/uniprot/Q6R1L7|https://www.uniprot.org/uniprot/Q6QU82|https://www.uniprot.org/uniprot/Q6Q1S2|https://www.uniprot.org/uniprot/Q696Q6|https://www.uniprot.org/uniprot/Q66291|https://www.uniprot.org/uniprot/Q66290|https://www.uniprot.org/uniprot/Q66199|https://www.uniprot.org/uniprot/Q66177|https://www.uniprot.org/uniprot/Q66176|https://www.uniprot.org/uniprot/Q66174|https://www.uniprot.org/uniprot/Q65984|https://www.uniprot.org/uniprot/Q5MQD0|https://www.uniprot.org/uniprot/Q5I5X9|https://www.uniprot.org/uniprot/Q5DIY0|https://www.uniprot.org/uniprot/Q5DIX9|https://www.uniprot.org/uniprot/Q5DIX8|https://www.uniprot.org/uniprot/Q5DIX7|https://www.uniprot.org/uniprot/Q52PA3|https://www.uniprot.org/uniprot/Q4ZJS1|https://www.uniprot.org/uniprot/Q4U5G0|https://www.uniprot.org/uniprot/Q3T8J0|https://www.uniprot.org/uniprot/Q3LZX1|https://www.uniprot.org/uniprot/Q3I5J5|https://www.uniprot.org/uniprot/Q14EB0|https://www.uniprot.org/uniprot/Q0ZME7|https://www.uniprot.org/uniprot/Q0Q4F2|https://www.uniprot.org/uniprot/Q0Q475|https://www.uniprot.org/uniprot/Q0Q466|https://www.uniprot.org/uniprot/Q0GNB8|https://www.uniprot.org/uniprot/Q02385|https://www.uniprot.org/uniprot/Q02167|https://www.uniprot.org/uniprot/Q01977|https://www.uniprot.org/uniprot/Q008X4|https://www.uniprot.org/uniprot/P89344|https://www.uniprot.org/uniprot/P89343|https://www.uniprot.org/uniprot/P89342|https://www.uniprot.org/uniprot/P59594|https://www.uniprot.org/uniprot/P36334|https://www.uniprot.org/uniprot/P36300|https://www.uniprot.org/uniprot/P33470|https://www.uniprot.org/uniprot/P30208|https://www.uniprot.org/uniprot/P30207|https://www.uniprot.org/uniprot/P30206|https://www.uniprot.org/uniprot/P30019|https://www.uniprot.org/uniprot/P27655|https://www.uniprot.org/uniprot/P25194|https://www.uniprot.org/uniprot/P25193|https://www.uniprot.org/uniprot/P25192|https://www.uniprot.org/uniprot/P25191|https://www.uniprot.org/uniprot/P25190|https://www.uniprot.org/uniprot/P24413|https://www.uniprot.org/uniprot/P23052|https://www.uniprot.org/uniprot/P22432|https://www.uniprot.org/uniprot/P18450|https://www.uniprot.org/uniprot/P17662|https://www.uniprot.org/uniprot/P15777|https://www.uniprot.org/uniprot/P15423|https://www.uniprot.org/uniprot/P12722|https://www.uniprot.org/uniprot/P12651|https://www.uniprot.org/uniprot/P12650|https://www.uniprot.org/uniprot/P11225|https://www.uniprot.org/uniprot/P11224|https://www.uniprot.org/uniprot/P11223|https://www.uniprot.org/uniprot/P10033|https://www.uniprot.org/uniprot/P0DTC2|https://www.uniprot.org/uniprot/P07946|https://www.uniprot.org/uniprot/P05135|https://www.uniprot.org/uniprot/P05134|https://www.uniprot.org/uniprot/O90304|https://www.uniprot.org/uniprot/O39227|https://www.uniprot.org/uniprot/K9N5Q8|https://www.uniprot.org/uniprot/A3EXG6|https://www.uniprot.org/uniprot/A3EXD0|https://www.uniprot.org/uniprot/A3EX94