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PMC:7253482 / 2702-2961 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
112 132-137 Gene denotes spike Gene:43740568
115 143-153 Species denotes SARS-CoV-2 Tax:2697049
119 95-110 Chemical denotes N-linked glycan
124 48-52 Disease denotes SARS MESH:D045169
125 57-61 Disease denotes MERS MESH:D018352

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T16 64-77 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T17 218-225 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T15 48-52 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T16 143-151 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T17 143-147 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T16 64-77 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T17 218-225 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T14 168-173 http://purl.obolibrary.org/obo/BFO_0000029 denotes sites
T15 244-248 http://purl.obolibrary.org/obo/IDO_0000531 denotes host

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T415 1-7 NN denotes known9
T416 7-8 -COMMA- denotes ,
T417 9-12 CC denotes and
T418 13-16 VBP denotes are
T419 17-28 RB denotes extensively
T420 29-41 VBN denotes glycosylated
T421 41-42 -COMMA- denotes ,
T422 43-47 IN denotes with
T423 48-52 NNP denotes SARS
T424 53-56 CC denotes and
T425 57-61 NNP denotes MERS
T426 62-63 NN denotes S
T427 64-77 NNS denotes glycoproteins
T428 78-82 CC denotes both
T429 83-91 VBG denotes encoding
T430 92-94 CD denotes 69
T431 95-103 JJ denotes N-linked
T432 104-110 NN denotes glycan
T433 111-118 NNS denotes sequons
T434 119-122 IN denotes per
T435 123-131 JJ denotes trimeric
T436 132-137 NN denotes spike
T437 138-142 IN denotes with
T438 143-153 NN denotes SARS-CoV-2
T439 154-164 VBG denotes containing
T440 165-167 CD denotes 66
T441 168-173 NNS denotes sites
T442 175-180 DT denotes These
T443 181-194 NNS denotes modifications
T444 195-200 RB denotes often
T445 201-205 VBP denotes mask
T446 206-217 JJ denotes immunogenic
T447 218-225 NN denotes protein
T448 226-234 NNS denotes epitopes
T449 235-239 IN denotes from
T450 240-243 DT denotes the
T451 244-248 NN denotes host
T452 249-256 JJ denotes humoral
R410 T417 T416 arg1Of and,","
R412 T420 T417 arg2Of glycosylated,and
R414 T420 T418 arg2Of glycosylated,are
R415 T420 T419 arg1Of glycosylated,extensively
R417 T420 T421 arg1Of glycosylated,","
R418 T420 T422 arg1Of glycosylated,with
R419 T427 T422 arg2Of glycoproteins,with
R420 T427 T423 arg1Of glycoproteins,SARS
R421 T423 T424 arg1Of SARS,and
R422 T425 T424 arg2Of MERS,and
R423 T427 T425 arg1Of glycoproteins,MERS
R424 T427 T426 arg1Of glycoproteins,S
R425 T429 T428 arg1Of encoding,both
R426 T427 T429 arg1Of glycoproteins,encoding
R427 T433 T429 arg2Of sequons,encoding
R428 T433 T430 arg1Of sequons,69
R429 T433 T431 arg1Of sequons,N-linked
R430 T433 T432 arg1Of sequons,glycan
R431 T433 T434 arg1Of sequons,per
R432 T436 T434 arg2Of spike,per
R433 T436 T435 arg1Of spike,trimeric
R434 T436 T437 arg1Of spike,with
R435 T438 T437 arg2Of SARS-CoV-2,with
R436 T438 T439 arg1Of SARS-CoV-2,containing
R437 T441 T439 arg2Of sites,containing
R438 T441 T440 arg1Of sites,66
R439 T443 T442 arg1Of modifications,These
R440 T445 T444 arg1Of mask,often
R441 T443 T445 arg1Of modifications,mask
R442 T448 T445 arg2Of epitopes,mask
R443 T448 T446 arg1Of epitopes,immunogenic
R444 T448 T447 arg1Of epitopes,protein
R445 T448 T449 arg1Of epitopes,from

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T16 64-77 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925
T17 218-225 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T15 64-77 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089
T16 218-225 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T24 48-52 Species denotes SARS NCBItxid:694009
T25 57-61 Species denotes MERS NCBItxid:1335626
T26 143-153 Species denotes SARS-CoV-2 NCBItxid:2697049
T27 143-147 Species denotes SARS NCBItxid:694009

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T15 48-52 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T16 143-153 Disease denotes SARS-CoV-2 http://purl.obolibrary.org/obo/MONDO_0100096
T17 143-147 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
124 48-52 Disease denotes SARS MESH:D045169
125 57-61 Disease denotes MERS MESH:D018352
119 95-110 Chemical denotes N-linked glycan
112 132-137 Gene denotes spike Gene:43740568
115 143-153 Species denotes SARS-CoV-2 Tax:2697049

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T841 62-77 Protein denotes S glycoproteins https://www.uniprot.org/uniprot/Q9QAS2|https://www.uniprot.org/uniprot/Q9QAR5|https://www.uniprot.org/uniprot/Q9QAQ8|https://www.uniprot.org/uniprot/Q9IW04|https://www.uniprot.org/uniprot/Q9IKD1|https://www.uniprot.org/uniprot/Q990M4|https://www.uniprot.org/uniprot/Q990M3|https://www.uniprot.org/uniprot/Q990M2|https://www.uniprot.org/uniprot/Q990M1|https://www.uniprot.org/uniprot/Q91AV1|https://www.uniprot.org/uniprot/Q91A26|https://www.uniprot.org/uniprot/Q8V436|https://www.uniprot.org/uniprot/Q8JSP8|https://www.uniprot.org/uniprot/Q8BB25|https://www.uniprot.org/uniprot/Q86623|https://www.uniprot.org/uniprot/Q85088|https://www.uniprot.org/uniprot/Q85087|https://www.uniprot.org/uniprot/Q80BV6|https://www.uniprot.org/uniprot/Q7TFB1|https://www.uniprot.org/uniprot/Q7TFA2|https://www.uniprot.org/uniprot/Q7TA19|https://www.uniprot.org/uniprot/Q7T6T3|https://www.uniprot.org/uniprot/Q7T696|https://www.uniprot.org/uniprot/Q77NC4|https://www.uniprot.org/uniprot/Q6TNF9|https://www.uniprot.org/uniprot/Q6R1L7|https://www.uniprot.org/uniprot/Q6QU82|https://www.uniprot.org/uniprot/Q6Q1S2|https://www.uniprot.org/uniprot/Q696Q6|https://www.uniprot.org/uniprot/Q66291|https://www.uniprot.org/uniprot/Q66290|https://www.uniprot.org/uniprot/Q66199|https://www.uniprot.org/uniprot/Q66177|https://www.uniprot.org/uniprot/Q66176|https://www.uniprot.org/uniprot/Q66174|https://www.uniprot.org/uniprot/Q65984|https://www.uniprot.org/uniprot/Q5MQD0|https://www.uniprot.org/uniprot/Q5I5X9|https://www.uniprot.org/uniprot/Q5DIY0|https://www.uniprot.org/uniprot/Q5DIX9|https://www.uniprot.org/uniprot/Q5DIX8|https://www.uniprot.org/uniprot/Q5DIX7|https://www.uniprot.org/uniprot/Q52PA3|https://www.uniprot.org/uniprot/Q4ZJS1|https://www.uniprot.org/uniprot/Q4U5G0|https://www.uniprot.org/uniprot/Q3T8J0|https://www.uniprot.org/uniprot/Q3LZX1|https://www.uniprot.org/uniprot/Q3I5J5|https://www.uniprot.org/uniprot/Q14EB0|https://www.uniprot.org/uniprot/Q0ZME7|https://www.uniprot.org/uniprot/Q0Q4F2|https://www.uniprot.org/uniprot/Q0Q475|https://www.uniprot.org/uniprot/Q0Q466|https://www.uniprot.org/uniprot/Q0GNB8|https://www.uniprot.org/uniprot/Q02385|https://www.uniprot.org/uniprot/Q02167|https://www.uniprot.org/uniprot/Q01977|https://www.uniprot.org/uniprot/Q008X4|https://www.uniprot.org/uniprot/P89344|https://www.uniprot.org/uniprot/P89343|https://www.uniprot.org/uniprot/P89342|https://www.uniprot.org/uniprot/P59594|https://www.uniprot.org/uniprot/P36334|https://www.uniprot.org/uniprot/P36300|https://www.uniprot.org/uniprot/P33470|https://www.uniprot.org/uniprot/P30208|https://www.uniprot.org/uniprot/P30207|https://www.uniprot.org/uniprot/P30206|https://www.uniprot.org/uniprot/P30019|https://www.uniprot.org/uniprot/P27655|https://www.uniprot.org/uniprot/P25194|https://www.uniprot.org/uniprot/P25193|https://www.uniprot.org/uniprot/P25192|https://www.uniprot.org/uniprot/P25191|https://www.uniprot.org/uniprot/P25190|https://www.uniprot.org/uniprot/P24413|https://www.uniprot.org/uniprot/P23052|https://www.uniprot.org/uniprot/P22432|https://www.uniprot.org/uniprot/P18450|https://www.uniprot.org/uniprot/P17662|https://www.uniprot.org/uniprot/P15777|https://www.uniprot.org/uniprot/P15423|https://www.uniprot.org/uniprot/P12722|https://www.uniprot.org/uniprot/P12651|https://www.uniprot.org/uniprot/P12650|https://www.uniprot.org/uniprot/P11225|https://www.uniprot.org/uniprot/P11224|https://www.uniprot.org/uniprot/P11223|https://www.uniprot.org/uniprot/P10033|https://www.uniprot.org/uniprot/P0DTC2|https://www.uniprot.org/uniprot/P07946|https://www.uniprot.org/uniprot/P05135|https://www.uniprot.org/uniprot/P05134|https://www.uniprot.org/uniprot/O90304|https://www.uniprot.org/uniprot/O39227|https://www.uniprot.org/uniprot/K9N5Q8|https://www.uniprot.org/uniprot/A3EXG6|https://www.uniprot.org/uniprot/A3EXD0|https://www.uniprot.org/uniprot/A3EX94