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PMC:7253482 / 25110-25336 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
810 134-144 Species denotes SARS-CoV-2 Tax:2697049
814 76-82 Chemical denotes glycan MESH:D011134
815 178-184 Chemical denotes glycan MESH:D011134
819 125-129 Disease denotes SARS MESH:D045169

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T86 125-129 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T87 134-142 Disease denotes SARS-CoV http://purl.obolibrary.org/obo/MONDO_0005091
T88 134-138 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T156 106-108 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T157 106-108 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T158 158-160 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T246 106-108 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387
T247 215-217 Chemical denotes SI http://purl.obolibrary.org/obo/CHEBI_90326

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T76 83-88 http://purl.obolibrary.org/obo/BFO_0000029 denotes sites
T77 185-189 http://purl.obolibrary.org/obo/BFO_0000029 denotes site

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T97000 0-4 DT denotes This
T64538 5-11 NN denotes notion
T59288 12-14 VBZ denotes is
T47385 15-22 RBR denotes further
T35201 23-32 VBN denotes reflected
T72056 33-35 IN denotes in
T18104 36-41 NNS denotes terms
T34570 42-44 IN denotes of
T18734 45-58 NN denotes glycosylation
T57766 58-59 -COMMA- denotes ,
T66534 60-64 IN denotes with
T36486 65-68 DT denotes all
T71292 69-71 IN denotes of
T8985 72-75 DT denotes the
T61275 76-82 NN denotes glycan
T2410 83-88 NNS denotes sites
T35106 89-98 VBN denotes conserved
T58672 99-101 IN denotes on
T57713 102-105 DT denotes the
T22974 106-108 NN denotes S2
T26472 109-116 NN denotes subunit
T18939 117-124 IN denotes between
T72173 125-129 NN denotes SARS
T72299 130-133 CC denotes and
T10006 134-144 NN denotes SARS-CoV-2
T58557 144-145 -COMMA- denotes ,
T83864 146-153 IN denotes whereas
T99079 154-157 DT denotes the
T3040 158-160 NN denotes S1
T2354 161-168 NN denotes subunit
T23968 169-177 VBZ denotes exhibits
T71933 178-184 NN denotes glycan
T60903 185-189 NN denotes site
T37762 190-199 NNS denotes additions
T91373 200-203 CC denotes and
T25121 204-213 NNS denotes deletions
T22092 214-215 -LRB- denotes (
T71875 215-217 NN denotes SI
T23058 218-224 NN denotes Fig. 7
T18793 224-225 -RRB- denotes )
R47138 T64538 T97000 arg1Of notion,This
R6662 T64538 T59288 arg1Of notion,is
R98954 T35201 T59288 arg2Of reflected,is
R33406 T35201 T47385 arg1Of reflected,further
R86035 T64538 T35201 arg2Of notion,reflected
R77417 T35201 T72056 arg1Of reflected,in
R26332 T18104 T72056 arg2Of terms,in
R98154 T18104 T34570 arg1Of terms,of
R54851 T18734 T34570 arg2Of glycosylation,of
R34585 T35201 T57766 arg1Of reflected,","
R52595 T35201 T66534 arg1Of reflected,with
R29976 T36486 T66534 arg2Of all,with
R79398 T36486 T71292 arg1Of all,of
R48396 T2410 T71292 arg2Of sites,of
R88808 T2410 T8985 arg1Of sites,the
R50718 T2410 T61275 arg1Of sites,glycan
R57707 T2410 T35106 arg2Of sites,conserved
R5701 T35106 T58672 arg1Of conserved,on
R96360 T26472 T58672 arg2Of subunit,on
R7938 T26472 T57713 arg1Of subunit,the
R33985 T26472 T22974 arg1Of subunit,S2
R17775 T26472 T18939 arg1Of subunit,between
R45968 T72299 T18939 arg2Of and,between
R57589 T72173 T72299 arg1Of SARS,and
R57832 T10006 T72299 arg2Of SARS-CoV-2,and
R85642 T83864 T58557 arg1Of whereas,","
R8157 T35201 T83864 arg1Of reflected,whereas
R72732 T23968 T83864 arg2Of exhibits,whereas
R77938 T2354 T99079 arg1Of subunit,the
R78301 T2354 T3040 arg1Of subunit,S1
R11819 T2354 T23968 arg1Of subunit,exhibits
R23723 T91373 T23968 arg2Of and,exhibits
R59857 T37762 T71933 arg1Of additions,glycan
R90671 T37762 T60903 arg1Of additions,site
R73831 T37762 T91373 arg1Of additions,and
R41822 T25121 T91373 arg2Of deletions,and
R85655 T25121 T22092 arg1Of deletions,(
R78333 T23058 T22092 arg2Of Fig. 7,(
R97294 T18793 T22092 arg3Of ),(
R45699 T23058 T71875 arg1Of Fig. 7,SI

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T177 125-129 Species denotes SARS NCBItxid:694009
T178 134-144 Species denotes SARS-CoV-2 NCBItxid:2697049
T179 134-138 Species denotes SARS NCBItxid:694009

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T142 0-226 Sentence denotes This notion is further reflected in terms of glycosylation, with all of the glycan sites conserved on the S2 subunit between SARS and SARS-CoV-2, whereas the S1 subunit exhibits glycan site additions and deletions (SI Fig. 7).

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T81 125-129 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T82 134-144 Disease denotes SARS-CoV-2 http://purl.obolibrary.org/obo/MONDO_0100096
T83 134-138 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
814 76-82 Chemical denotes glycan MESH:D011134
819 125-129 Disease denotes SARS MESH:D045169
810 134-144 Species denotes SARS-CoV-2 Tax:2697049
815 178-184 Chemical denotes glycan MESH:D011134

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T52 45-58 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T47 45-58 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T52 45-58 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T142 0-226 Sentence denotes This notion is further reflected in terms of glycosylation, with all of the glycan sites conserved on the S2 subunit between SARS and SARS-CoV-2, whereas the S1 subunit exhibits glycan site additions and deletions (SI Fig. 7).