PMC:7253482 / 2240-2568
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
103 | 256-278 | Gene | denotes | dipeptidyl-peptidase 4 | Gene:1803 |
104 | 280-284 | Gene | denotes | DPP4 | Gene:1803 |
110 | 302-303 | Gene | denotes | S | Gene:43740568 |
111 | 245-246 | Gene | denotes | S | Gene:43740568 |
113 | 310-320 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
122 | 240-244 | Disease | denotes | MERS | MESH:D018352 |
123 | 297-301 | Disease | denotes | SARS | MESH:D045169 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T11 | 77-85 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T12 | 99-103 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T13 | 174-178 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T12 | 297-301 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T13 | 310-318 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T14 | 310-314 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T12 | 99-103 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T13 | 119-121 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
T14 | 126-128 | http://purl.obolibrary.org/obo/CLO_0008922 | denotes | S2 |
T15 | 126-128 | http://purl.obolibrary.org/obo/CLO_0050052 | denotes | S2 |
T16 | 174-178 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cell |
T17 | 205-213 | http://purl.obolibrary.org/obo/UBERON_0000158 | denotes | membrane |
T18 | 236-238 | http://purl.obolibrary.org/obo/CLO_0053733 | denotes | 11 |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T11 | 77-85 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
T12 | 126-128 | Chemical | denotes | S2 | http://purl.obolibrary.org/obo/CHEBI_29387 |
LitCovid-sample-PD-IDO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T9 | 94-98 | http://purl.obolibrary.org/obo/IDO_0000531 | denotes | host |
T10 | 99-103 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cell |
T11 | 169-173 | http://purl.obolibrary.org/obo/IDO_0000531 | denotes | host |
T12 | 174-178 | http://purl.obolibrary.org/obo/CL_0000000 | denotes | cell |
LitCovid-sample-Enju
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T343 | 2-12 | VB | denotes | constitute |
T344 | 13-16 | DT | denotes | the |
T345 | 17-21 | JJ | denotes | main |
T346 | 22-28 | NN | denotes | target |
T347 | 29-31 | IN | denotes | of |
T348 | 32-44 | VBG | denotes | neutralizing |
T349 | 45-58 | NN | denotes | antibodies7,8 |
T350 | 60-65 | DT | denotes | These |
T351 | 66-74 | JJ | denotes | trimeric |
T352 | 75-76 | NN | denotes | S |
T353 | 77-85 | NNS | denotes | proteins |
T354 | 86-93 | VBP | denotes | mediate |
T355 | 94-103 | JJ | denotes | host-cell |
T356 | 104-109 | NN | denotes | entry |
T357 | 110-114 | IN | denotes | with |
T358 | 115-118 | DT | denotes | the |
T359 | 119-121 | NN | denotes | S1 |
T360 | 122-125 | CC | denotes | and |
T361 | 126-128 | NN | denotes | S2 |
T362 | 129-137 | NNS | denotes | subunits |
T363 | 138-149 | JJ | denotes | responsible |
T364 | 150-153 | IN | denotes | for |
T365 | 154-161 | VBG | denotes | binding |
T366 | 162-164 | TO | denotes | to |
T367 | 165-168 | DT | denotes | the |
T368 | 169-178 | NN | denotes | host-cell |
T369 | 179-187 | NN | denotes | receptor |
T370 | 188-191 | CC | denotes | and |
T371 | 192-204 | VBG | denotes | facilitating |
T372 | 205-213 | NN | denotes | membrane |
T373 | 214-220 | NN | denotes | fusion |
T374 | 220-221 | -COMMA- | denotes | , |
T375 | 222-238 | NN | denotes | respectively9–11 |
T376 | 240-244 | NNS | denotes | MERS |
T377 | 245-246 | NN | denotes | S |
T378 | 247-252 | VBZ | denotes | binds |
T379 | 253-255 | TO | denotes | to |
T380 | 256-276 | NN | denotes | dipeptidyl-peptidase |
T381 | 277-278 | CD | denotes | 4 |
T382 | 279-280 | -LRB- | denotes | ( |
T383 | 280-284 | NN | denotes | DPP4 |
T384 | 284-285 | -RRB- | denotes | ) |
T385 | 285-287 | CD | denotes | 12 |
T386 | 287-288 | -COMMA- | denotes | , |
T387 | 289-296 | IN | denotes | whereas |
T388 | 297-301 | NN | denotes | SARS |
T389 | 302-305 | NN | denotes | S13 |
T390 | 306-309 | CC | denotes | and |
T391 | 310-325 | NN | denotes | SARS-CoV-214,15 |
R340 | T346 | T343 | arg2Of | target,constitute |
R341 | T346 | T344 | arg1Of | target,the |
R342 | T346 | T345 | arg1Of | target,main |
R343 | T346 | T347 | arg1Of | target,of |
R344 | T348 | T347 | arg2Of | neutralizing,of |
R345 | T349 | T348 | arg2Of | "antibodies7,8",neutralizing |
R346 | T353 | T350 | arg1Of | proteins,These |
R347 | T353 | T351 | arg1Of | proteins,trimeric |
R348 | T353 | T352 | arg1Of | proteins,S |
R349 | T353 | T354 | arg1Of | proteins,mediate |
R350 | T356 | T354 | arg2Of | entry,mediate |
R351 | T356 | T355 | arg1Of | entry,host-cell |
R352 | T354 | T357 | arg1Of | mediate,with |
R353 | T362 | T357 | arg2Of | subunits,with |
R354 | T362 | T358 | arg1Of | subunits,the |
R355 | T362 | T359 | arg1Of | subunits,S1 |
R356 | T359 | T360 | arg1Of | S1,and |
R357 | T361 | T360 | arg2Of | S2,and |
R358 | T362 | T361 | arg1Of | subunits,S2 |
R359 | T362 | T363 | arg1Of | subunits,responsible |
R360 | T363 | T364 | arg1Of | responsible,for |
R361 | T370 | T364 | arg2Of | and,for |
R362 | T365 | T366 | arg1Of | binding,to |
R363 | T369 | T366 | arg2Of | receptor,to |
R364 | T369 | T367 | arg1Of | receptor,the |
R365 | T369 | T368 | arg1Of | receptor,host-cell |
R366 | T365 | T370 | arg1Of | binding,and |
R367 | T371 | T370 | arg2Of | facilitating,and |
R368 | T373 | T371 | arg2Of | fusion,facilitating |
R369 | T373 | T372 | arg1Of | fusion,membrane |
R370 | T362 | T374 | arg1Of | subunits,"," |
R371 | T375 | T374 | arg2Of | respectively9–11,"," |
R372 | T377 | T376 | arg1Of | S,MERS |
R373 | T377 | T378 | arg1Of | S,binds |
R374 | T378 | T379 | arg1Of | binds,to |
R375 | T380 | T379 | arg2Of | dipeptidyl-peptidase,to |
R376 | T380 | T381 | arg1Of | dipeptidyl-peptidase,4 |
R377 | T380 | T382 | arg1Of | dipeptidyl-peptidase,( |
R378 | T383 | T382 | arg2Of | DPP4,( |
R379 | T384 | T382 | arg3Of | ),( |
R380 | T380 | T385 | arg1Of | dipeptidyl-peptidase,12 |
R381 | T378 | T386 | arg1Of | binds,"," |
R382 | T378 | T387 | arg1Of | binds,whereas |
R384 | T389 | T388 | arg1Of | S13,SARS |
R385 | T389 | T390 | arg1Of | S13,and |
R386 | T391 | T390 | arg2Of | "SARS-CoV-214,15",and |
LitCovid-sample-PD-FMA
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T11 | 77-85 | Body_part | denotes | proteins | http://purl.org/sig/ont/fma/fma67257 |
T12 | 99-103 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
T13 | 174-178 | Body_part | denotes | cell | http://purl.org/sig/ont/fma/fma68646 |
LitCovid-sample-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T11 | 77-85 | Chemical | denotes | proteins | http://purl.obolibrary.org/obo/CHEBI_36080 |
LitCovid-sample-PD-NCBITaxon
Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
---|---|---|---|---|---|
T20 | 240-244 | Species | denotes | MERS | NCBItxid:1335626 |
T21 | 297-301 | Species | denotes | SARS | NCBItxid:694009 |
T22 | 310-318 | Species | denotes | SARS-CoV | NCBItxid:694009 |
T23 | 310-314 | Species | denotes | SARS | NCBItxid:694009 |
LitCovid-sample-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16 | 60-239 | Sentence | denotes | These trimeric S proteins mediate host-cell entry with the S1 and S2 subunits responsible for binding to the host-cell receptor and facilitating membrane fusion, respectively9–11. |
LitCovid-sample-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T12 | 297-301 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T13 | 310-318 | Disease | denotes | SARS-CoV | http://purl.obolibrary.org/obo/MONDO_0005091 |
T14 | 310-314 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
122 | 240-244 | Disease | denotes | MERS | MESH:D018352 |
111 | 245-246 | Gene | denotes | S | Gene:43740568 |
103 | 256-278 | Gene | denotes | dipeptidyl-peptidase 4 | Gene:1803 |
104 | 280-284 | Gene | denotes | DPP4 | Gene:1803 |
123 | 297-301 | Disease | denotes | SARS | MESH:D045169 |
110 | 302-303 | Gene | denotes | S | Gene:43740568 |
113 | 310-320 | Species | denotes | SARS-CoV-2 | Tax:2697049 |
LitCovid-sample-UniProt
Id | Subject | Object | Predicate | Lexical cue | uniprot_id |
---|---|---|---|---|---|
T747 | 75-85 | Protein | denotes | S proteins | https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9 |
T780 | 256-278 | Protein | denotes | dipeptidyl-peptidase 4 | https://www.uniprot.org/uniprot/Q9N2I7|https://www.uniprot.org/uniprot/Q8WMG8|https://www.uniprot.org/uniprot/Q866G2|https://www.uniprot.org/uniprot/Q53TN1|https://www.uniprot.org/uniprot/Q3ZCC2|https://www.uniprot.org/uniprot/Q3U514|https://www.uniprot.org/uniprot/P81425|https://www.uniprot.org/uniprot/P28843|https://www.uniprot.org/uniprot/P27487|https://www.uniprot.org/uniprot/P22411|https://www.uniprot.org/uniprot/P14740 |
T791 | 280-284 | Protein | denotes | DPP4 | https://www.uniprot.org/uniprot/Q9N2I7 |
LitCovid-sample-PD-GO-BP-0
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11 | 205-220 | http://purl.obolibrary.org/obo/GO_0061025 | denotes | membrane fusion |
LitCovid-sample-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10 | 205-220 | http://purl.obolibrary.org/obo/GO_0061025 | denotes | membrane fusion |
LitCovid-PD-GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11 | 205-220 | http://purl.obolibrary.org/obo/GO_0061025 | denotes | membrane fusion |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16 | 60-239 | Sentence | denotes | These trimeric S proteins mediate host-cell entry with the S1 and S2 subunits responsible for binding to the host-cell receptor and facilitating membrane fusion, respectively9–11. |