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PMC:7253482 / 2157-2485 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
67 24-29 Gene denotes spike Gene:43740568
122 323-327 Disease denotes MERS MESH:D018352

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T10 34-42 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T11 160-168 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T12 182-186 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T13 257-261 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T11 11-16 http://purl.obolibrary.org/obo/CLO_0009985 denotes focus
T12 182-186 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T13 202-204 http://purl.obolibrary.org/obo/CLO_0050050 denotes S1
T14 209-211 http://purl.obolibrary.org/obo/CLO_0008922 denotes S2
T15 209-211 http://purl.obolibrary.org/obo/CLO_0050052 denotes S2
T16 257-261 http://purl.obolibrary.org/obo/GO_0005623 denotes cell
T17 288-296 http://purl.obolibrary.org/obo/UBERON_0000158 denotes membrane
T18 319-321 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T10 34-42 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T11 160-168 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T12 209-211 Chemical denotes S2 http://purl.obolibrary.org/obo/CHEBI_29387

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T9 177-181 http://purl.obolibrary.org/obo/IDO_0000531 denotes host
T10 182-186 http://purl.obolibrary.org/obo/CL_0000000 denotes cell
T11 252-256 http://purl.obolibrary.org/obo/IDO_0000531 denotes host
T12 257-261 http://purl.obolibrary.org/obo/CL_0000000 denotes cell

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T327 3-10 NNS denotes efforts
T328 11-16 NN denotes focus
T329 17-19 IN denotes on
T330 20-23 DT denotes the
T331 24-29 NN denotes spike
T332 30-31 -LRB- denotes (
T333 31-32 NN denotes S
T334 32-33 -RRB- denotes )
T335 34-42 NNS denotes proteins
T336 43-47 WDT denotes that
T337 48-56 VBP denotes protrude
T338 57-61 IN denotes from
T339 62-65 DT denotes the
T340 66-71 JJ denotes viral
T341 72-80 NN denotes envelope
T342 81-84 CC denotes and
T343 85-95 VB denotes constitute
T344 96-99 DT denotes the
T345 100-104 JJ denotes main
T346 105-111 NN denotes target
T347 112-114 IN denotes of
T348 115-127 VBG denotes neutralizing
T349 128-141 NN denotes antibodies7,8
T350 143-148 DT denotes These
T351 149-157 JJ denotes trimeric
T352 158-159 NN denotes S
T353 160-168 NNS denotes proteins
T354 169-176 VBP denotes mediate
T355 177-186 JJ denotes host-cell
T356 187-192 NN denotes entry
T357 193-197 IN denotes with
T358 198-201 DT denotes the
T359 202-204 NN denotes S1
T360 205-208 CC denotes and
T361 209-211 NN denotes S2
T362 212-220 NNS denotes subunits
T363 221-232 JJ denotes responsible
T364 233-236 IN denotes for
T365 237-244 VBG denotes binding
T366 245-247 TO denotes to
T367 248-251 DT denotes the
T368 252-261 NN denotes host-cell
T369 262-270 NN denotes receptor
T370 271-274 CC denotes and
T371 275-287 VBG denotes facilitating
T372 288-296 NN denotes membrane
T373 297-303 NN denotes fusion
T374 303-304 -COMMA- denotes ,
T375 305-321 NN denotes respectively9–11
T376 323-327 NNS denotes MERS
R323 T328 T327 arg1Of focus,efforts
R324 T328 T329 arg1Of focus,on
R325 T335 T329 arg2Of proteins,on
R326 T335 T330 arg1Of proteins,the
R327 T335 T331 arg1Of proteins,spike
R328 T335 T332 arg1Of proteins,(
R329 T333 T332 arg2Of S,(
R330 T334 T332 arg3Of ),(
R331 T335 T336 arg1Of proteins,that
R332 T335 T337 arg1Of proteins,protrude
R333 T337 T338 arg1Of protrude,from
R334 T341 T338 arg2Of envelope,from
R335 T341 T339 arg1Of envelope,the
R336 T341 T340 arg1Of envelope,viral
R337 T337 T342 arg1Of protrude,and
R338 T343 T342 arg2Of constitute,and
R339 T335 T343 arg1Of proteins,constitute
R340 T346 T343 arg2Of target,constitute
R341 T346 T344 arg1Of target,the
R342 T346 T345 arg1Of target,main
R343 T346 T347 arg1Of target,of
R344 T348 T347 arg2Of neutralizing,of
R345 T349 T348 arg2Of "antibodies7,8",neutralizing
R346 T353 T350 arg1Of proteins,These
R347 T353 T351 arg1Of proteins,trimeric
R348 T353 T352 arg1Of proteins,S
R349 T353 T354 arg1Of proteins,mediate
R350 T356 T354 arg2Of entry,mediate
R351 T356 T355 arg1Of entry,host-cell
R352 T354 T357 arg1Of mediate,with
R353 T362 T357 arg2Of subunits,with
R354 T362 T358 arg1Of subunits,the
R355 T362 T359 arg1Of subunits,S1
R356 T359 T360 arg1Of S1,and
R357 T361 T360 arg2Of S2,and
R358 T362 T361 arg1Of subunits,S2
R359 T362 T363 arg1Of subunits,responsible
R360 T363 T364 arg1Of responsible,for
R361 T370 T364 arg2Of and,for
R362 T365 T366 arg1Of binding,to
R363 T369 T366 arg2Of receptor,to
R364 T369 T367 arg1Of receptor,the
R365 T369 T368 arg1Of receptor,host-cell
R366 T365 T370 arg1Of binding,and
R367 T371 T370 arg2Of facilitating,and
R368 T373 T371 arg2Of fusion,facilitating
R369 T373 T372 arg1Of fusion,membrane
R370 T362 T374 arg1Of subunits,","
R371 T375 T374 arg2Of respectively9–11,","

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T10 34-42 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T11 160-168 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T12 182-186 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646
T13 257-261 Body_part denotes cell http://purl.org/sig/ont/fma/fma68646

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T10 34-42 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T11 160-168 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T20 323-327 Species denotes MERS NCBItxid:1335626

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T16 143-322 Sentence denotes These trimeric S proteins mediate host-cell entry with the S1 and S2 subunits responsible for binding to the host-cell receptor and facilitating membrane fusion, respectively9–11.

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
67 24-29 Gene denotes spike Gene:43740568
122 323-327 Disease denotes MERS MESH:D018352

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T714 30-42 Protein denotes (S) proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T747 158-168 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T11 288-303 http://purl.obolibrary.org/obo/GO_0061025 denotes membrane fusion

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T10 288-303 http://purl.obolibrary.org/obo/GO_0061025 denotes membrane fusion

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T11 288-303 http://purl.obolibrary.org/obo/GO_0061025 denotes membrane fusion

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T16 143-322 Sentence denotes These trimeric S proteins mediate host-cell entry with the S1 and S2 subunits responsible for binding to the host-cell receptor and facilitating membrane fusion, respectively9–11.