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PMC:7253482 / 20507-21362 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
704 213-216 Gene denotes GPC Gene:2995
705 221-232 Species denotes coronavirus Tax:11118
706 362-373 Species denotes coronavirus Tax:11118
707 778-791 Species denotes coronaviruses Tax:11118
708 507-510 Gene denotes GPC Gene:2995
709 147-153 Chemical denotes glycan MESH:D011134
710 259-265 Chemical denotes glycan MESH:D011134
711 402-408 Chemical denotes glycan MESH:D011134
712 586-593 Chemical denotes glycans MESH:D011134
713 811-817 Chemical denotes glycan MESH:D011134

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T116 15-23 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T117 235-243 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T118 327-334 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T119 376-384 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T120 559-566 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T121 706-719 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T118 527-528 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T119 651-652 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T120 834-835 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T208 15-23 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T209 235-243 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T210 327-334 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T211 376-384 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T212 559-566 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T213 586-593 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T214 706-719 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-MedDRA

Id Subject Object Predicate Lexical cue meddra_id
T7 279-285 http://purl.bioontology.org/ontology/MEDDRA/10022891 denotes weight http://purl.bioontology.org/ontology/MEDDRA/10047890

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T55 671-686 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T55443 0-5 JJ denotes Viral
T49065 6-14 NN denotes envelope
T84653 15-23 NNS denotes proteins
T43155 24-27 VBP denotes are
T38543 28-40 VBN denotes glycosylated
T78070 41-43 TO denotes to
T10289 44-51 VBG denotes varying
T40134 52-59 NNS denotes degrees
T67415 59-60 -COMMA- denotes ,
T91973 61-64 CC denotes but
T56277 65-74 VBG denotes depending
T67259 75-77 IN denotes on
T24257 78-83 PRP-DOLLAR- denotes their
T41537 84-91 JJ denotes overall
T90997 92-96 NN denotes mass
T80023 96-97 -COMMA- denotes ,
T58957 98-105 NN denotes surface
T24905 106-110 NN denotes area
T39391 110-111 -COMMA- denotes ,
T28342 112-115 CC denotes and
T95089 116-122 NN denotes volume
T63529 122-123 -COMMA- denotes ,
T2361 124-127 DT denotes the
T67520 128-135 JJ denotes overall
T74143 136-143 NN denotes density
T41564 144-146 IN denotes of
T83144 147-153 NN denotes glycan
T18180 154-163 NN denotes shielding
T4164 164-167 MD denotes may
T65417 168-174 VB denotes differ
T71938 175-188 RB denotes significantly
T57335 190-193 IN denotes For
T68440 194-201 NN denotes example
T98634 201-202 -COMMA- denotes ,
T80942 203-207 CC denotes both
T39961 208-212 NN denotes LASV
T61867 213-216 NN denotes GPC
T97427 217-220 CC denotes and
T69629 221-232 NN denotes coronavirus
T13147 233-234 NN denotes S
T76361 235-243 NNS denotes proteins
T11359 244-251 VBP denotes consist
T63374 252-254 IN denotes of
T22368 255-257 CD denotes 25
T83476 257-258 NN denotes %
T86335 259-265 NN denotes glycan
T7181 266-268 IN denotes by
T64282 269-278 JJ denotes molecular
T19690 279-285 NN denotes weight
T82304 287-294 RB denotes However
T18710 294-295 -COMMA- denotes ,
T92980 296-301 VBN denotes given
T59451 302-305 DT denotes the
T14852 306-319 RB denotes significantly
T91376 320-326 JJR denotes larger
T30498 327-334 NN denotes protein
T87161 335-342 NN denotes surface
T40590 343-347 NN denotes area
T34685 348-351 CC denotes and
T68729 352-358 NN denotes volume
T30100 359-361 IN denotes of
T69433 362-373 NN denotes coronavirus
T57189 374-375 NN denotes S
T90347 376-384 NNS denotes proteins
T54950 384-385 -COMMA- denotes ,
T25542 386-394 NN denotes coverage
T55713 395-397 IN denotes of
T73077 398-401 DT denotes the
T91248 402-408 NN denotes glycan
T75525 409-417 NN denotes “shield”
T85581 418-422 IN denotes over
T10462 423-426 DT denotes the
T38271 427-440 JJ denotes proteinaceous
T15422 441-448 NN denotes surface
T79412 449-451 VBZ denotes is
T84846 452-464 RB denotes considerably
T29000 465-472 JJR denotes sparser
T67524 473-475 IN denotes in
T19223 476-486 NN denotes comparison
T56739 487-489 TO denotes to
T26633 490-493 DT denotes the
T50837 494-501 JJR denotes smaller
T14862 502-506 NN denotes LASV
T24662 507-510 NN denotes GPC
T66930 510-511 -COMMA- denotes ,
T41800 512-517 WDT denotes which
T43310 518-526 VBZ denotes occludes
T12542 527-528 DT denotes a
T78671 529-532 RB denotes far
T97136 533-540 JJR denotes greater
T85689 541-551 NN denotes proportion
T37643 552-554 IN denotes of
T83557 555-558 DT denotes the
T32584 559-566 NN denotes protein
T81297 567-574 NN denotes surface
T57424 575-579 IN denotes with
T34206 580-585 JJR denotes fewer
T37921 586-593 NNS denotes glycans
T28846 595-597 TO denotes To
T62794 598-609 VB denotes demonstrate
T60590 610-614 IN denotes that
T13036 615-618 DT denotes the
T83020 619-627 NN denotes presence
T39523 628-630 IN denotes of
T3739 631-644 NN denotes glycosylation
T70902 645-650 VBZ denotes plays
T36916 651-652 DT denotes a
T54253 653-658 JJ denotes major
T97319 659-663 NN denotes role
T80278 664-666 IN denotes in
T56668 667-670 DT denotes the
T5602 671-677 JJ denotes immune
T20048 678-686 NN denotes response
T51090 687-689 TO denotes to
T73801 690-695 DT denotes these
T88581 696-705 JJ denotes different
T72197 706-719 NNS denotes glycoproteins
T95182 719-720 -COMMA- denotes ,
T91428 721-723 PRP denotes we
T10009 724-731 VBD denotes studied
T37828 732-735 DT denotes the
T67976 736-743 NN denotes glycome
T12260 744-746 IN denotes of
T57382 747-754 JJ denotes several
T97617 755-767 RB denotes biomedically
T89645 768-777 JJ denotes important
T8512 778-791 NNS denotes coronaviruses
T62759 792-795 CC denotes and
T88912 796-804 VBN denotes compared
T64812 805-810 PRP-DOLLAR- denotes their
T90729 811-817 NN denotes glycan
T6629 818-830 NNS denotes compositions
T15821 831-833 IN denotes in
T75735 834-835 DT denotes a
T68214 836-846 JJ denotes structural
T93322 847-854 NN denotes context
R62725 T84653 T55443 arg1Of proteins,Viral
R90521 T84653 T49065 arg1Of proteins,envelope
R65728 T84653 T43155 arg1Of proteins,are
R17171 T38543 T43155 arg2Of glycosylated,are
R79509 T84653 T38543 arg2Of proteins,glycosylated
R84776 T38543 T78070 arg1Of glycosylated,to
R55540 T40134 T78070 arg2Of degrees,to
R80559 T40134 T10289 arg1Of degrees,varying
R47307 T91973 T67415 arg1Of but,","
R76809 T38543 T91973 arg1Of glycosylated,but
R39386 T65417 T91973 arg2Of differ,but
R77574 T65417 T56277 arg1Of differ,depending
R37591 T67259 T56277 arg2Of on,depending
R98678 T28342 T67259 arg2Of and,on
R31934 T28342 T24257 arg1Of and,their
R57079 T90997 T41537 arg1Of mass,overall
R5643 T90997 T80023 arg1Of mass,","
R92515 T24905 T80023 arg2Of area,","
R33832 T24905 T58957 arg1Of area,surface
R98141 T28342 T39391 arg1Of and,","
R67091 T80023 T28342 arg1Of ",",and
R72983 T95089 T28342 arg2Of volume,and
R91669 T65417 T63529 arg1Of differ,","
R74094 T74143 T2361 arg1Of density,the
R40876 T74143 T67520 arg1Of density,overall
R12128 T74143 T41564 arg1Of density,of
R78096 T18180 T41564 arg2Of shielding,of
R22100 T18180 T83144 arg1Of shielding,glycan
R8931 T74143 T4164 arg1Of density,may
R28079 T65417 T4164 arg2Of differ,may
R49480 T74143 T65417 arg1Of density,differ
R77082 T65417 T71938 arg1Of differ,significantly
R99203 T11359 T57335 arg1Of consist,For
R61108 T68440 T57335 arg2Of example,For
R97191 T11359 T98634 arg1Of consist,","
R47214 T97427 T80942 arg1Of and,both
R49906 T61867 T39961 arg1Of GPC,LASV
R34126 T61867 T97427 arg1Of GPC,and
R52028 T76361 T97427 arg2Of proteins,and
R16669 T76361 T69629 arg1Of proteins,coronavirus
R7973 T76361 T13147 arg1Of proteins,S
R33595 T97427 T11359 arg1Of and,consist
R58193 T11359 T63374 arg1Of consist,of
R50550 T86335 T63374 arg2Of glycan,of
R57960 T86335 T22368 arg1Of glycan,25
R16310 T22368 T83476 arg1Of 25,%
R14418 T86335 T7181 arg1Of glycan,by
R13645 T19690 T7181 arg2Of weight,by
R47903 T19690 T64282 arg1Of weight,molecular
R91538 T79412 T82304 arg1Of is,However
R85045 T79412 T18710 arg1Of is,","
R61463 T79412 T92980 arg1Of is,given
R62165 T34685 T92980 arg2Of and,given
R65513 T34685 T59451 arg1Of and,the
R8832 T91376 T14852 arg1Of larger,significantly
R81910 T34685 T91376 arg1Of and,larger
R33779 T40590 T30498 arg1Of area,protein
R38415 T40590 T87161 arg1Of area,surface
R59919 T40590 T34685 arg1Of area,and
R50264 T68729 T34685 arg2Of volume,and
R25119 T68729 T30100 arg1Of volume,of
R52004 T90347 T30100 arg2Of proteins,of
R14652 T90347 T69433 arg1Of proteins,coronavirus
R24908 T90347 T57189 arg1Of proteins,S
R17774 T79412 T54950 arg1Of is,","
R34860 T25542 T55713 arg1Of coverage,of
R72417 T75525 T55713 arg2Of “shield”,of
R90220 T75525 T73077 arg1Of “shield”,the
R90068 T75525 T91248 arg1Of “shield”,glycan
R72163 T25542 T85581 arg1Of coverage,over
R8424 T15422 T85581 arg2Of surface,over
R68158 T15422 T10462 arg1Of surface,the
R19054 T15422 T38271 arg1Of surface,proteinaceous
R94280 T25542 T79412 arg1Of coverage,is
R3001 T29000 T79412 arg2Of sparser,is
R16084 T29000 T84846 arg1Of sparser,considerably
R67521 T25542 T29000 arg1Of coverage,sparser
R23889 T79412 T67524 arg1Of is,in
R24573 T19223 T67524 arg2Of comparison,in
R53479 T19223 T56739 arg1Of comparison,to
R81143 T24662 T56739 arg2Of GPC,to
R88101 T24662 T26633 arg1Of GPC,the
R45175 T24662 T50837 arg1Of GPC,smaller
R12860 T24662 T14862 arg1Of GPC,LASV
R45822 T24662 T66930 arg1Of GPC,","
R42415 T24662 T41800 arg1Of GPC,which
R50107 T24662 T43310 arg1Of GPC,occludes
R46471 T85689 T43310 arg2Of proportion,occludes
R71428 T85689 T12542 arg1Of proportion,a
R2307 T97136 T78671 arg1Of greater,far
R10719 T85689 T97136 arg1Of proportion,greater
R12427 T85689 T37643 arg1Of proportion,of
R68593 T81297 T37643 arg2Of surface,of
R97141 T81297 T83557 arg1Of surface,the
R93509 T81297 T32584 arg1Of surface,protein
R50130 T43310 T57424 arg1Of occludes,with
R62864 T37921 T57424 arg2Of glycans,with
R15665 T37921 T34206 arg1Of glycans,fewer
R99001 T62794 T28846 arg1Of demonstrate,To
R99635 T88912 T28846 modOf compared,To
R91807 T95182 T62794 arg1Of ",",demonstrate
R65540 T95182 T60590 arg1Of ",",that
R56289 T83020 T13036 arg1Of presence,the
R43590 T83020 T39523 arg1Of presence,of
R53317 T3739 T39523 arg2Of glycosylation,of
R73752 T83020 T70902 arg1Of presence,plays
R11603 T97319 T70902 arg2Of role,plays
R55180 T97319 T36916 arg1Of role,a
R83497 T97319 T54253 arg1Of role,major
R31252 T70902 T80278 arg1Of plays,in
R74391 T20048 T80278 arg2Of response,in
R59802 T20048 T56668 arg1Of response,the
R44817 T20048 T5602 arg1Of response,immune
R59957 T20048 T51090 arg1Of response,to
R48001 T72197 T51090 arg2Of glycoproteins,to
R39369 T72197 T73801 arg1Of glycoproteins,these
R17670 T72197 T88581 arg1Of glycoproteins,different
R97784 T70902 T95182 arg1Of plays,","
R83297 T10009 T95182 arg2Of studied,","
R14505 T91428 T10009 arg1Of we,studied
R47693 T67976 T10009 arg2Of glycome,studied
R37191 T67976 T37828 arg1Of glycome,the
R15459 T67976 T12260 arg1Of glycome,of
R50544 T8512 T12260 arg2Of coronaviruses,of
R69444 T8512 T57382 arg1Of coronaviruses,several
R98278 T8512 T97617 arg1Of coronaviruses,biomedically
R52224 T8512 T89645 arg1Of coronaviruses,important
R30995 T10009 T62759 arg1Of studied,and
R15321 T95182 T88912 arg1Of ",",compared
R20779 T6629 T88912 arg2Of compositions,compared
R4765 T6629 T64812 arg1Of compositions,their
R78049 T6629 T90729 arg1Of compositions,glycan
R71448 T88912 T15821 arg1Of compared,in
R45316 T93322 T15821 arg2Of context,in
R23134 T93322 T75735 arg1Of context,a
R74402 T93322 T68214 arg1Of context,structural

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T115 15-23 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T116 235-243 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T117 327-334 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T118 376-384 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T119 559-566 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T120 706-719 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T142 15-23 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T143 235-243 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T144 327-334 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T145 376-384 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T146 559-566 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T147 586-593 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154
T148 706-719 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T150 208-212 Species denotes LASV NCBItxid:11620
T151 502-506 Species denotes LASV NCBItxid:11620

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T120 0-189 Sentence denotes Viral envelope proteins are glycosylated to varying degrees, but depending on their overall mass, surface area, and volume, the overall density of glycan shielding may differ significantly.
T121 190-286 Sentence denotes For example, both LASV GPC and coronavirus S proteins consist of 25% glycan by molecular weight.
T122 287-594 Sentence denotes However, given the significantly larger protein surface area and volume of coronavirus S proteins, coverage of the glycan “shield” over the proteinaceous surface is considerably sparser in comparison to the smaller LASV GPC, which occludes a far greater proportion of the protein surface with fewer glycans.
T123 595-855 Sentence denotes To demonstrate that the presence of glycosylation plays a major role in the immune response to these different glycoproteins, we studied the glycome of several biomedically important coronaviruses and compared their glycan compositions in a structural context.

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
709 147-153 Chemical denotes glycan MESH:D011134
704 213-216 Gene denotes GPC Gene:2995
705 221-232 Species denotes coronavirus Tax:11118
710 259-265 Chemical denotes glycan MESH:D011134
706 362-373 Species denotes coronavirus Tax:11118
711 402-408 Chemical denotes glycan MESH:D011134
708 507-510 Gene denotes GPC Gene:2995
712 586-593 Chemical denotes glycans MESH:D011134
707 778-791 Species denotes coronaviruses Tax:11118
713 811-817 Chemical denotes glycan MESH:D011134

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T4053 6-23 Protein denotes envelope proteins https://www.uniprot.org/uniprot/P24123|https://www.uniprot.org/uniprot/P0C782|https://www.uniprot.org/uniprot/P0C781|https://www.uniprot.org/uniprot/C1JJY3
T4057 213-216 Protein denotes GPC https://www.uniprot.org/uniprot/P03711
T4058 233-243 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T4091 374-384 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T4124 507-510 Protein denotes GPC https://www.uniprot.org/uniprot/P03711
T4125 706-719 Protein denotes glycoproteins https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T40 631-644 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T41 671-686 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T37 631-644 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T38 671-686 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T41 631-644 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation
T42 671-686 http://purl.obolibrary.org/obo/GO_0006955 denotes immune response

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T120 0-189 Sentence denotes Viral envelope proteins are glycosylated to varying degrees, but depending on their overall mass, surface area, and volume, the overall density of glycan shielding may differ significantly.
T121 190-286 Sentence denotes For example, both LASV GPC and coronavirus S proteins consist of 25% glycan by molecular weight.
T122 287-594 Sentence denotes However, given the significantly larger protein surface area and volume of coronavirus S proteins, coverage of the glycan “shield” over the proteinaceous surface is considerably sparser in comparison to the smaller LASV GPC, which occludes a far greater proportion of the protein surface with fewer glycans.
T123 595-855 Sentence denotes To demonstrate that the presence of glycosylation plays a major role in the immune response to these different glycoproteins, we studied the glycome of several biomedically important coronaviruses and compared their glycan compositions in a structural context.