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PMC:7253482 / 18103-18299 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
666 61-71 Species denotes chimpanzee Tax:9598
667 72-110 Species denotes simian immunodeficiency virus (SIVcpz) Tax:11723
689 48-52 Disease denotes MERS MESH:D018352
690 150-154 Disease denotes SARS MESH:D045169

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T104 142-145 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T67 79-95 Disease denotes immunodeficiency http://purl.obolibrary.org/obo/MONDO_0021094
T68 150-154 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T104 61-71 http://purl.obolibrary.org/obo/NCBITaxon_9598 denotes chimpanzee
T105 96-101 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T196 14-16 Chemical denotes EM http://purl.obolibrary.org/obo/CHEBI_73507

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T50 79-95 http://purl.obolibrary.org/obo/IDO_0000617 denotes immunodeficiency
T51 96-101 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes virus
T52 179-186 http://purl.obolibrary.org/obo/BFO_0000019 denotes quality

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T12832 0-8 IN denotes Although
T24787 9-16 NN denotes cryo-EM
T29672 17-25 NNS denotes datasets
T9596 26-28 IN denotes of
T45576 29-34 RB denotes fully
T37894 35-47 VBN denotes glycosylated
T35124 48-52 NNS denotes MERS
T87593 53-56 NN denotes S41
T79382 57-60 CC denotes and
T63281 61-71 NN denotes chimpanzee
T35247 72-78 JJ denotes simian
T82138 79-95 NN denotes immunodeficiency
T35287 96-101 NN denotes virus
T14224 102-103 -LRB- denotes (
T81517 103-109 NN denotes SIVcpz
T3442 109-110 -RRB- denotes )
T14676 110-112 CD denotes 53
T32530 113-116 VBP denotes are
T45598 117-121 RB denotes also
T95444 122-131 JJ denotes available
T17171 131-132 -COMMA- denotes ,
T88916 133-137 RB denotes only
T2700 138-141 DT denotes the
T19064 142-145 NN denotes HIV
T16401 146-149 CC denotes and
T74879 150-154 NN denotes SARS
T37597 155-159 NNS denotes data
T46398 160-164 VBD denotes were
T10901 165-167 IN denotes of
T19935 168-178 JJ denotes sufficient
T58744 179-186 NN denotes quality
T47642 187-188 -LRB- denotes (
T27616 188-194 CD denotes Fig. 5
T15042 194-195 -RRB- denotes )
R67744 T46398 T12832 arg1Of were,Although
R43629 T32530 T12832 arg2Of are,Although
R1401 T29672 T24787 arg1Of datasets,cryo-EM
R89552 T29672 T9596 arg1Of datasets,of
R67665 T14676 T9596 arg2Of 53,of
R80940 T37894 T45576 arg1Of glycosylated,fully
R76365 T35124 T37894 arg1Of MERS,glycosylated
R75905 T35287 T35124 arg1Of virus,MERS
R59119 T35287 T87593 arg1Of virus,S41
R60460 T87593 T79382 arg1Of S41,and
R21732 T63281 T79382 arg2Of chimpanzee,and
R19327 T35287 T63281 arg1Of virus,chimpanzee
R8406 T35287 T35247 arg1Of virus,simian
R69725 T35287 T82138 arg1Of virus,immunodeficiency
R55541 T14676 T35287 arg1Of 53,virus
R62464 T35287 T14224 arg1Of virus,(
R13007 T81517 T14224 arg2Of SIVcpz,(
R57966 T3442 T14224 arg3Of ),(
R58028 T29672 T32530 arg1Of datasets,are
R4932 T95444 T32530 arg2Of available,are
R86107 T32530 T45598 arg1Of are,also
R62361 T29672 T95444 arg1Of datasets,available
R89109 T46398 T17171 arg1Of were,","
R65623 T37597 T88916 arg1Of data,only
R22986 T37597 T2700 arg1Of data,the
R34869 T37597 T19064 arg1Of data,HIV
R99409 T19064 T16401 arg1Of HIV,and
R21820 T74879 T16401 arg2Of SARS,and
R87987 T37597 T74879 arg1Of data,SARS
R84789 T37597 T46398 arg1Of data,were
R79506 T10901 T46398 arg2Of of,were
R74395 T37597 T10901 arg1Of data,of
R7658 T58744 T10901 arg2Of quality,of
R98976 T58744 T19935 arg1Of quality,sufficient
R4181 T58744 T47642 arg1Of quality,(
R34223 T27616 T47642 arg2Of Fig. 5,(
R6426 T15042 T47642 arg3Of ),(

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T103 142-145 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T130 48-52 Species denotes MERS NCBItxid:1335626
T131 61-71 Species denotes chimpanzee NCBItxid:9598
T132 72-101 Species denotes simian immunodeficiency virus NCBItxid:11723
T133 103-109 Species denotes SIVcpz NCBItxid:388909
T134 142-145 Species denotes HIV NCBItxid:57667|NCBItxid:35274|NCBItxid:12721|NCBItxid:11709|NCBItxid:11676
T139 150-154 Species denotes SARS NCBItxid:694009

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T106 0-196 Sentence denotes Although cryo-EM datasets of fully glycosylated MERS S41 and chimpanzee simian immunodeficiency virus (SIVcpz)53 are also available, only the HIV and SARS data were of sufficient quality (Fig. 5).

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T62 79-95 Disease denotes immunodeficiency http://purl.obolibrary.org/obo/MONDO_0021094
T63 150-154 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
689 48-52 Disease denotes MERS MESH:D018352
666 61-71 Species denotes chimpanzee Tax:9598
667 72-110 Species denotes simian immunodeficiency virus (SIVcpz) Tax:11723
690 150-154 Disease denotes SARS MESH:D045169

LitCovid-sample-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 79-95 Phenotype denotes immunodeficiency http://purl.obolibrary.org/obo/HP_0002721

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T106 0-196 Sentence denotes Although cryo-EM datasets of fully glycosylated MERS S41 and chimpanzee simian immunodeficiency virus (SIVcpz)53 are also available, only the HIV and SARS data were of sufficient quality (Fig. 5).

LitCovid-PD-HP

Id Subject Object Predicate Lexical cue hp_id
T1 79-95 Phenotype denotes immunodeficiency http://purl.obolibrary.org/obo/HP_0002721