PMC:7253482 / 17587-17905 JSONTXT

Annnotations TAB JSON ListView MergeView

    LitCovid-PubTator

    {"project":"LitCovid-PubTator","denotations":[{"id":"656","span":{"begin":4,"end":7},"obj":"Gene"},{"id":"662","span":{"begin":274,"end":279},"obj":"Species"},{"id":"663","span":{"begin":284,"end":300},"obj":"Species"},{"id":"671","span":{"begin":126,"end":132},"obj":"Chemical"},{"id":"672","span":{"begin":254,"end":260},"obj":"Chemical"}],"attributes":[{"id":"A656","pred":"tao:has_database_id","subj":"656","obj":"Gene:64006"},{"id":"A662","pred":"tao:has_database_id","subj":"662","obj":"Tax:11676"},{"id":"A663","pred":"tao:has_database_id","subj":"663","obj":"Tax:694009"},{"id":"A671","pred":"tao:has_database_id","subj":"671","obj":"MESH:D011134"},{"id":"A672","pred":"tao:has_database_id","subj":"672","obj":"MESH:D011134"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}

    LitCovid-PD-FMA-UBERON

    {"project":"LitCovid-PD-FMA-UBERON","denotations":[{"id":"T101","span":{"begin":45,"end":52},"obj":"Body_part"},{"id":"T102","span":{"begin":274,"end":277},"obj":"Body_part"}],"attributes":[{"id":"A101","pred":"fma_id","subj":"T101","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A102","pred":"fma_id","subj":"T102","obj":"http://purl.org/sig/ont/fma/fma278683"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}

    LitCovid-PD-MONDO

    {"project":"LitCovid-PD-MONDO","denotations":[{"id":"T65","span":{"begin":284,"end":288},"obj":"Disease"}],"attributes":[{"id":"A65","pred":"mondo_id","subj":"T65","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}

    LitCovid-PD-CLO

    {"project":"LitCovid-PD-CLO","denotations":[{"id":"T103","span":{"begin":11,"end":12},"obj":"http://purl.obolibrary.org/obo/CLO_0001020"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}

    LitCovid-PD-CHEBI

    {"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T193","span":{"begin":45,"end":52},"obj":"Chemical"}],"attributes":[{"id":"A193","pred":"chebi_id","subj":"T193","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}

    LitCovid-sample-PD-IDO

    {"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T49","span":{"begin":164,"end":168},"obj":"http://purl.obolibrary.org/obo/IDO_0000531"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}

    LitCovid-sample-Enju

    {"project":"LitCovid-sample-Enju","denotations":[{"id":"T3174","span":{"begin":4,"end":7},"obj":"NN"},{"id":"T27555","span":{"begin":8,"end":10},"obj":"VBZ"},{"id":"T55541","span":{"begin":11,"end":12},"obj":"DT"},{"id":"T20248","span":{"begin":13,"end":23},"obj":"JJ"},{"id":"T67286","span":{"begin":24,"end":29},"obj":"JJ"},{"id":"T69498","span":{"begin":30,"end":35},"obj":"NN"},{"id":"T3932","span":{"begin":36,"end":37},"obj":"CD"},{"id":"T49427","span":{"begin":38,"end":44},"obj":"NN"},{"id":"T80657","span":{"begin":45,"end":52},"obj":"NN"},{"id":"T46816","span":{"begin":53,"end":57},"obj":"WDT"},{"id":"T99370","span":{"begin":58,"end":66},"obj":"VBZ"},{"id":"T82158","span":{"begin":67,"end":76},"obj":"JJ"},{"id":"T40184","span":{"begin":77,"end":84},"obj":"NN"},{"id":"T83381","span":{"begin":85,"end":98},"obj":"NN"},{"id":"T34922","span":{"begin":98,"end":99},"obj":"-COMMA-"},{"id":"T41135","span":{"begin":100,"end":109},"obj":"VBG"},{"id":"T52094","span":{"begin":110,"end":112},"obj":"IN"},{"id":"T41086","span":{"begin":113,"end":115},"obj":"DT"},{"id":"T24478","span":{"begin":116,"end":125},"obj":"JJ"},{"id":"T12116","span":{"begin":126,"end":132},"obj":"NN"},{"id":"T66049","span":{"begin":133,"end":139},"obj":"NN"},{"id":"T24089","span":{"begin":140,"end":142},"obj":"TO"},{"id":"T80516","span":{"begin":143,"end":146},"obj":"VB"},{"id":"T40146","span":{"begin":147,"end":154},"obj":"NN"},{"id":"T31245","span":{"begin":155,"end":159},"obj":"IN"},{"id":"T10149","span":{"begin":160,"end":163},"obj":"DT"},{"id":"T79574","span":{"begin":164,"end":168},"obj":"NN"},{"id":"T93688","span":{"begin":169,"end":177},"obj":"JJ"},{"id":"T94198","span":{"begin":178,"end":184},"obj":"JJ"},{"id":"T10989","span":{"begin":185,"end":198},"obj":"NN"},{"id":"T32196","span":{"begin":200,"end":202},"obj":"IN"},{"id":"T81817","span":{"begin":203,"end":208},"obj":"NN"},{"id":"T91723","span":{"begin":209,"end":211},"obj":"TO"},{"id":"T52822","span":{"begin":212,"end":221},"obj":"VB"},{"id":"T6796","span":{"begin":222,"end":225},"obj":"DT"},{"id":"T38040","span":{"begin":226,"end":235},"obj":"NN"},{"id":"T51236","span":{"begin":236,"end":238},"obj":"IN"},{"id":"T17574","span":{"begin":239,"end":242},"obj":"DT"},{"id":"T94895","span":{"begin":243,"end":253},"obj":"JJ"},{"id":"T2313","span":{"begin":254,"end":260},"obj":"NN"},{"id":"T39465","span":{"begin":261,"end":270},"obj":"NN"},{"id":"T63649","span":{"begin":271,"end":273},"obj":"IN"},{"id":"T97323","span":{"begin":274,"end":279},"obj":"NN"},{"id":"T48816","span":{"begin":280,"end":283},"obj":"CC"},{"id":"T59243","span":{"begin":284,"end":288},"obj":"NN"},{"id":"T65533","span":{"begin":289,"end":300},"obj":"NN"},{"id":"T26306","span":{"begin":301,"end":303},"obj":"PRP"},{"id":"T89403","span":{"begin":304,"end":308},"obj":"VBD"}],"relations":[{"id":"R77404","pred":"arg1Of","subj":"T3174","obj":"T27555"},{"id":"R67045","pred":"arg2Of","subj":"T80657","obj":"T27555"},{"id":"R19042","pred":"arg1Of","subj":"T80657","obj":"T55541"},{"id":"R70679","pred":"arg1Of","subj":"T80657","obj":"T20248"},{"id":"R98963","pred":"arg1Of","subj":"T80657","obj":"T67286"},{"id":"R51375","pred":"arg1Of","subj":"T80657","obj":"T69498"},{"id":"R65034","pred":"arg1Of","subj":"T80657","obj":"T3932"},{"id":"R38518","pred":"arg1Of","subj":"T80657","obj":"T49427"},{"id":"R18142","pred":"arg1Of","subj":"T80657","obj":"T46816"},{"id":"R95989","pred":"arg1Of","subj":"T80657","obj":"T99370"},{"id":"R21203","pred":"arg2Of","subj":"T83381","obj":"T99370"},{"id":"R62409","pred":"arg1Of","subj":"T83381","obj":"T82158"},{"id":"R45278","pred":"arg1Of","subj":"T83381","obj":"T40184"},{"id":"R36808","pred":"arg1Of","subj":"T99370","obj":"T34922"},{"id":"R25095","pred":"modOf","subj":"T99370","obj":"T41135"},{"id":"R66468","pred":"arg1Of","subj":"T41135","obj":"T52094"},{"id":"R61128","pred":"arg2Of","subj":"T66049","obj":"T52094"},{"id":"R69033","pred":"arg1Of","subj":"T66049","obj":"T41086"},{"id":"R63943","pred":"arg1Of","subj":"T66049","obj":"T24478"},{"id":"R16751","pred":"arg1Of","subj":"T66049","obj":"T12116"},{"id":"R91171","pred":"arg1Of","subj":"T80516","obj":"T24089"},{"id":"R35674","pred":"modOf","subj":"T41135","obj":"T24089"},{"id":"R17624","pred":"arg2Of","subj":"T40146","obj":"T80516"},{"id":"R94826","pred":"arg1Of","subj":"T80516","obj":"T31245"},{"id":"R46405","pred":"arg2Of","subj":"T10989","obj":"T31245"},{"id":"R49465","pred":"arg1Of","subj":"T10989","obj":"T10149"},{"id":"R67827","pred":"arg1Of","subj":"T10989","obj":"T79574"},{"id":"R10702","pred":"arg1Of","subj":"T10989","obj":"T93688"},{"id":"R76944","pred":"arg1Of","subj":"T10989","obj":"T94198"},{"id":"R87495","pred":"arg1Of","subj":"T89403","obj":"T32196"},{"id":"R27221","pred":"arg2Of","subj":"T81817","obj":"T32196"},{"id":"R83664","pred":"arg3Of","subj":"T52822","obj":"T32196"},{"id":"R29301","pred":"arg1Of","subj":"T52822","obj":"T91723"},{"id":"R70687","pred":"arg1Of","subj":"T26306","obj":"T52822"},{"id":"R22808","pred":"arg2Of","subj":"T38040","obj":"T52822"},{"id":"R29213","pred":"arg1Of","subj":"T38040","obj":"T6796"},{"id":"R33103","pred":"arg1Of","subj":"T38040","obj":"T51236"},{"id":"R62729","pred":"arg2Of","subj":"T39465","obj":"T51236"},{"id":"R18785","pred":"arg1Of","subj":"T39465","obj":"T17574"},{"id":"R96799","pred":"arg1Of","subj":"T39465","obj":"T94895"},{"id":"R10078","pred":"arg1Of","subj":"T39465","obj":"T2313"},{"id":"R37534","pred":"arg1Of","subj":"T39465","obj":"T63649"},{"id":"R43507","pred":"arg2Of","subj":"T65533","obj":"T63649"},{"id":"R52525","pred":"arg1Of","subj":"T65533","obj":"T97323"},{"id":"R22163","pred":"arg1Of","subj":"T97323","obj":"T48816"},{"id":"R63270","pred":"arg2Of","subj":"T59243","obj":"T48816"},{"id":"R44071","pred":"arg1Of","subj":"T65533","obj":"T59243"},{"id":"R33310","pred":"arg1Of","subj":"T26306","obj":"T89403"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}

    LitCovid-sample-PD-FMA

    {"project":"LitCovid-sample-PD-FMA","denotations":[{"id":"T100","span":{"begin":45,"end":52},"obj":"Body_part"},{"id":"T101","span":{"begin":274,"end":277},"obj":"Body_part"}],"attributes":[{"id":"A100","pred":"fma_id","subj":"T100","obj":"http://purl.org/sig/ont/fma/fma67257"},{"id":"A101","pred":"fma_id","subj":"T101","obj":"http://purl.org/sig/ont/fma/fma278683"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}

    LitCovid-sample-CHEBI

    {"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T135","span":{"begin":45,"end":52},"obj":"Chemical"}],"attributes":[{"id":"A135","pred":"chebi_id","subj":"T135","obj":"http://purl.obolibrary.org/obo/CHEBI_36080"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}

    LitCovid-sample-PD-NCBITaxon

    {"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T125","span":{"begin":274,"end":279},"obj":"Species"},{"id":"T126","span":{"begin":284,"end":300},"obj":"Species"},{"id":"T127","span":{"begin":284,"end":288},"obj":"Species"}],"attributes":[{"id":"A125","pred":"ncbi_taxonomy_id","subj":"T125","obj":"NCBItxid:11676"},{"id":"A126","pred":"ncbi_taxonomy_id","subj":"T126","obj":"NCBItxid:694009"},{"id":"A127","pred":"ncbi_taxonomy_id","subj":"T127","obj":"NCBItxid:694009"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}

    LitCovid-sample-PD-MONDO

    {"project":"LitCovid-sample-PD-MONDO","denotations":[{"id":"T60","span":{"begin":284,"end":288},"obj":"Disease"}],"attributes":[{"id":"A60","pred":"mondo_id","subj":"T60","obj":"http://purl.obolibrary.org/obo/MONDO_0005091"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}

    LitCovid-sample-Pubtator

    {"project":"LitCovid-sample-Pubtator","denotations":[{"id":"656","span":{"begin":4,"end":7},"obj":"Gene"},{"id":"671","span":{"begin":126,"end":132},"obj":"Chemical"},{"id":"672","span":{"begin":254,"end":260},"obj":"Chemical"},{"id":"662","span":{"begin":274,"end":279},"obj":"Species"},{"id":"663","span":{"begin":284,"end":300},"obj":"Species"}],"attributes":[{"id":"A656","pred":"pubann:denotes","subj":"656","obj":"Gene:64006"},{"id":"A671","pred":"pubann:denotes","subj":"671","obj":"MESH:D011134"},{"id":"A672","pred":"pubann:denotes","subj":"672","obj":"MESH:D011134"},{"id":"A662","pred":"pubann:denotes","subj":"662","obj":"Tax:11676"},{"id":"A663","pred":"pubann:denotes","subj":"663","obj":"Tax:694009"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}

    LitCovid-sample-UniProt

    {"project":"LitCovid-sample-UniProt","denotations":[{"id":"T3769","span":{"begin":4,"end":7},"obj":"Protein"}],"attributes":[{"id":"A3769","pred":"uniprot_id","subj":"T3769","obj":"https://www.uniprot.org/uniprot/C1JJY3"},{"id":"A3770","pred":"uniprot_id","subj":"T3769","obj":"https://www.uniprot.org/uniprot/P24123"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}

    LitCovid-sample-PD-GO-BP-0

    {"project":"LitCovid-sample-PD-GO-BP-0","denotations":[{"id":"T38","span":{"begin":85,"end":98},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}

    LitCovid-sample-GO-BP

    {"project":"LitCovid-sample-GO-BP","denotations":[{"id":"T35","span":{"begin":85,"end":98},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}

    LitCovid-PD-GO-BP

    {"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T39","span":{"begin":85,"end":98},"obj":"http://purl.obolibrary.org/obo/GO_0070085"}],"text":"V-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31. In order to visualize the structure of the respective glycan “shields” of HIV-1 and SARS coronavirus we used single-pa"}