> top > docs > PMC:7253482 > spans > 17556-17810 > annotations

PMC:7253482 / 17556-17810 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
602 3-9 Chemical denotes glycan MESH:D011134
656 35-38 Gene denotes Env Gene:64006
661 29-34 Species denotes HIV-1 Tax:11676
671 157-163 Chemical denotes glycan MESH:D011134

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T100 29-32 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T101 76-83 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T103 42-43 http://purl.obolibrary.org/obo/CLO_0001020 denotes a

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T192 26-28 Chemical denotes EM http://purl.obolibrary.org/obo/CHEBI_73507
T193 76-83 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T49 195-199 http://purl.obolibrary.org/obo/IDO_0000531 denotes host

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T1365 3-9 NN denotes glycan
T1366 10-17 NNS denotes shields
T1367 18-20 IN denotes by
T1368 21-28 NN denotes cryo-EM
T8430 29-34 NN denotes HIV-1
T3174 35-38 NN denotes Env
T27555 39-41 VBZ denotes is
T55541 42-43 DT denotes a
T20248 44-54 JJ denotes prototypic
T67286 55-60 JJ denotes viral
T69498 61-66 NN denotes class
T3932 67-68 CD denotes I
T49427 69-75 NN denotes fusion
T80657 76-83 NN denotes protein
T46816 84-88 WDT denotes that
T99370 89-97 VBZ denotes exhibits
T82158 98-107 JJ denotes extensive
T40184 108-115 NN denotes surface
T83381 116-129 NN denotes glycosylation
T34922 129-130 -COMMA- denotes ,
T41135 131-140 VBG denotes resulting
T52094 141-143 IN denotes in
T41086 144-146 DT denotes an
T24478 147-156 JJ denotes effective
T12116 157-163 NN denotes glycan
T66049 164-170 NN denotes shield
T24089 171-173 TO denotes to
T80516 174-177 VB denotes aid
T40146 178-185 NN denotes evasion
T31245 186-190 IN denotes from
T10149 191-194 DT denotes the
T79574 195-199 NN denotes host
T93688 200-208 JJ denotes adaptive
T94198 209-215 JJ denotes immune
T10989 216-229 NN denotes response21,31
T32196 231-233 IN denotes In
T81817 234-239 NN denotes order
T91723 240-242 TO denotes to
T52822 243-252 VB denotes visualize
R1383 T1366 T1365 arg1Of shields,glycan
R1385 T1368 T1367 arg2Of cryo-EM,by
R40112 T3174 T8430 arg1Of Env,HIV-1
R77404 T3174 T27555 arg1Of Env,is
R67045 T80657 T27555 arg2Of protein,is
R19042 T80657 T55541 arg1Of protein,a
R70679 T80657 T20248 arg1Of protein,prototypic
R98963 T80657 T67286 arg1Of protein,viral
R51375 T80657 T69498 arg1Of protein,class
R65034 T80657 T3932 arg1Of protein,I
R38518 T80657 T49427 arg1Of protein,fusion
R18142 T80657 T46816 arg1Of protein,that
R95989 T80657 T99370 arg1Of protein,exhibits
R21203 T83381 T99370 arg2Of glycosylation,exhibits
R62409 T83381 T82158 arg1Of glycosylation,extensive
R45278 T83381 T40184 arg1Of glycosylation,surface
R36808 T99370 T34922 arg1Of exhibits,","
R25095 T99370 T41135 modOf exhibits,resulting
R66468 T41135 T52094 arg1Of resulting,in
R61128 T66049 T52094 arg2Of shield,in
R69033 T66049 T41086 arg1Of shield,an
R63943 T66049 T24478 arg1Of shield,effective
R16751 T66049 T12116 arg1Of shield,glycan
R91171 T80516 T24089 arg1Of aid,to
R35674 T41135 T24089 modOf resulting,to
R17624 T40146 T80516 arg2Of evasion,aid
R94826 T80516 T31245 arg1Of aid,from
R46405 T10989 T31245 arg2Of "response21,31",from
R49465 T10989 T10149 arg1Of "response21,31",the
R67827 T10989 T79574 arg1Of "response21,31",host
R10702 T10989 T93688 arg1Of "response21,31",adaptive
R76944 T10989 T94198 arg1Of "response21,31",immune
R27221 T81817 T32196 arg2Of order,In
R83664 T52822 T32196 arg3Of visualize,In
R29301 T52822 T91723 arg1Of visualize,to

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T99 29-32 Body_part denotes HIV http://purl.org/sig/ont/fma/fma278683
T100 76-83 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T135 76-83 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T124 29-34 Species denotes HIV-1 NCBItxid:11676

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T103 29-230 Sentence denotes HIV-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31.

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
602 3-9 Chemical denotes glycan MESH:D011134
661 29-34 Species denotes HIV-1 Tax:11676
656 35-38 Gene denotes Env Gene:64006
671 157-163 Chemical denotes glycan MESH:D011134

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T3769 35-38 Protein denotes Env https://www.uniprot.org/uniprot/C1JJY3|https://www.uniprot.org/uniprot/P24123

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T38 116-129 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T35 116-129 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T39 116-129 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T103 29-230 Sentence denotes HIV-1 Env is a prototypic viral class I fusion protein that exhibits extensive surface glycosylation, resulting in an effective glycan shield to aid evasion from the host adaptive immune response21,31.