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PMC:7253482 / 15744-16048 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
556 181-184 Species denotes CoV Tax:11118

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T94 83-93 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T95 187-195 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T96 253-260 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T94 39-40 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T95 202-204 http://purl.obolibrary.org/obo/CLO_0001387 denotes 4c

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T181 83-88 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T182 89-93 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T183 187-195 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T184 253-260 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T44 78-82 http://purl.obolibrary.org/obo/BFO_0000029 denotes site

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T30445 3-11 VBN denotes compared
T55016 12-16 IN denotes with
T1385 17-24 VBN denotes exposed
T65828 25-33 NNS denotes residues
T35353 34-38 IN denotes with
T91154 39-40 DT denotes a
T26380 41-46 NN denotes value
T92544 47-49 IN denotes of
T79406 50-54 CD denotes 0.45
T92418 56-67 RB denotes Furthermore
T91452 67-68 -COMMA- denotes ,
T84302 69-73 WRB denotes when
T74584 74-82 JJ denotes per-site
T76352 83-93 JJ denotes amino-acid
T98451 94-105 NNS denotes diversities
T72837 106-110 VBD denotes were
T54724 111-117 VBN denotes mapped
T45778 118-122 IN denotes onto
T98923 123-126 DT denotes the
T59533 127-132 RB denotes fully
T25862 133-145 VBN denotes glycosylated
T32515 146-156 JJ denotes structural
T94405 157-162 NN denotes model
T76643 163-165 IN denotes of
T13755 166-169 DT denotes the
T14482 170-180 JJ denotes respective
T65032 181-184 NN denotes CoV
T12704 185-186 NN denotes S
T70323 187-195 NNS denotes proteins
T33888 196-197 -LRB- denotes (
T60190 197-204 NN denotes Fig. 4c
T27628 204-205 -RRB- denotes )
T87038 205-206 -COMMA- denotes ,
T49843 207-215 NNS denotes hotspots
T77547 216-218 IN denotes of
T63244 219-228 NNS denotes mutations
T5765 229-233 VBD denotes were
T8574 234-245 VBN denotes highlighted
T21020 246-248 IN denotes on
T89986 249-252 DT denotes the
T65568 253-260 NN denotes protein
T63130 261-268 NN denotes surface
T96535 269-279 IN denotes throughout
T21467 280-283 DT denotes the
T66745 284-290 NN denotes trimer
T45284 291-300 VBG denotes revealing
R30304 T55016 T30445 arg2Of with,compared
R12429 T65828 T55016 arg2Of residues,with
R1617 T65828 T1385 arg2Of residues,exposed
R52562 T65828 T35353 arg1Of residues,with
R41359 T26380 T35353 arg2Of value,with
R58840 T26380 T91154 arg1Of value,a
R3337 T26380 T92544 arg1Of value,of
R58419 T79406 T92544 arg2Of 0.45,of
R63445 T8574 T92418 arg1Of highlighted,Furthermore
R94598 T8574 T91452 arg1Of highlighted,","
R44950 T8574 T84302 arg1Of highlighted,when
R49097 T54724 T84302 arg2Of mapped,when
R15450 T98451 T74584 arg1Of diversities,per-site
R66839 T98451 T76352 arg1Of diversities,amino-acid
R15217 T98451 T72837 arg1Of diversities,were
R77763 T54724 T72837 arg2Of mapped,were
R37654 T98451 T54724 arg2Of diversities,mapped
R36115 T54724 T45778 arg1Of mapped,onto
R3433 T94405 T45778 arg2Of model,onto
R53298 T94405 T98923 arg1Of model,the
R43272 T25862 T59533 arg1Of glycosylated,fully
R50247 T94405 T25862 arg1Of model,glycosylated
R26701 T94405 T32515 arg1Of model,structural
R74679 T94405 T76643 arg1Of model,of
R51542 T70323 T76643 arg2Of proteins,of
R2173 T70323 T13755 arg1Of proteins,the
R85398 T70323 T14482 arg1Of proteins,respective
R51942 T70323 T65032 arg1Of proteins,CoV
R5341 T70323 T12704 arg1Of proteins,S
R68632 T70323 T33888 arg1Of proteins,(
R28101 T60190 T33888 arg2Of Fig. 4c,(
R79333 T27628 T33888 arg3Of ),(
R50373 T8574 T87038 arg1Of highlighted,","
R78452 T49843 T77547 arg1Of hotspots,of
R70051 T63244 T77547 arg2Of mutations,of
R86243 T49843 T5765 arg1Of hotspots,were
R62080 T8574 T5765 arg2Of highlighted,were
R36037 T49843 T8574 arg2Of hotspots,highlighted
R69989 T8574 T21020 arg1Of highlighted,on
R21042 T63130 T21020 arg2Of surface,on
R99168 T63130 T89986 arg1Of surface,the
R84573 T63130 T65568 arg1Of surface,protein
R18040 T8574 T96535 arg1Of highlighted,throughout
R83519 T66745 T96535 arg2Of trimer,throughout
R40238 T66745 T21467 arg1Of trimer,the
R11527 T66745 T45284 arg1Of trimer,revealing

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T93 83-93 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T94 187-195 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T95 253-260 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T129 83-88 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T130 187-195 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T131 253-260 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
556 181-184 Species denotes CoV Tax:11118

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T3703 185-195 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9