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PMC:7253482 / 15384-16383 JSONTXT

Annnotations TAB JSON ListView MergeView

LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
556 541-544 Species denotes CoV Tax:11118
557 736-745 Species denotes MERS CoVs Tax:1335626
558 94-96 Chemical denotes dN MESH:C022306
559 97-99 Chemical denotes dS MESH:D003903
560 170-172 Chemical denotes dN MESH:C022306
561 173-175 Chemical denotes dS MESH:D003903
562 227-229 Chemical denotes dN MESH:C022306
563 230-232 Chemical denotes dS MESH:D003903
564 343-345 Chemical denotes dN MESH:C022306
565 346-348 Chemical denotes dS MESH:D003903
566 710-716 Chemical denotes glycan MESH:D011134
567 885-892 Chemical denotes glycans MESH:D011134
568 213-217 Disease denotes SARS MESH:D045169
569 321-325 Disease denotes MERS MESH:D018352
570 727-731 Disease denotes SARS MESH:D045169
571 841-845 Disease denotes MERS MESH:D018352

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T93 63-73 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T94 443-453 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T95 547-555 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T96 613-620 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T97 785-795 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T98 848-856 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T55 213-217 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T56 727-731 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T93 330-331 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T94 399-400 http://purl.obolibrary.org/obo/CLO_0001020 denotes a
T95 562-564 http://purl.obolibrary.org/obo/CLO_0001387 denotes 4c

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T176 63-73 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976
T177 94-96 Chemical denotes dN http://purl.obolibrary.org/obo/CHEBI_33793
T178 170-172 Chemical denotes dN http://purl.obolibrary.org/obo/CHEBI_33793
T179 227-229 Chemical denotes dN http://purl.obolibrary.org/obo/CHEBI_33793
T180 343-345 Chemical denotes dN http://purl.obolibrary.org/obo/CHEBI_33793
T181 443-448 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T182 449-453 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T183 547-555 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T184 613-620 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T185 785-790 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T186 791-795 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T187 848-856 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T188 885-892 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T42 38-48 http://www.geneontology.org/formats/oboInOwl#Synonym denotes synonymous
T43 52-62 http://www.geneontology.org/formats/oboInOwl#Synonym denotes synonymous
T44 438-442 http://purl.obolibrary.org/obo/BFO_0000029 denotes site
T45 968-981 http://purl.obolibrary.org/obo/BFO_0000034 denotes functionality

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T69499 0-8 NN denotes Analysis
T65163 9-11 IN denotes of
T23395 12-15 DT denotes the
T78947 16-24 JJ denotes relative
T61369 25-30 NN denotes ratio
T85886 31-33 IN denotes of
T53309 34-48 JJ denotes non-synonymous
T78726 49-51 TO denotes to
T13118 52-62 JJ denotes synonymous
T63573 63-73 NN denotes nucleotide
T72369 74-87 NNS denotes substitutions
T18378 88-89 -LRB- denotes (
T58404 89-93 FW denotes i.e.
T58779 94-99 NN denotes dN/dS
T10324 100-106 NNS denotes ratios
T30580 106-107 -RRB- denotes )
T83087 108-116 VBD denotes revealed
T2494 117-121 IN denotes that
T4328 122-129 VBN denotes exposed
T12652 130-138 NNS denotes residues
T92287 139-148 VBD denotes exhibited
T88501 149-162 RB denotes significantly
T11718 163-169 JJR denotes higher
T86795 170-175 NN denotes dN/dS
T59603 176-182 NNS denotes values
T7211 183-184 -LRB- denotes (
T4769 184-191 NN denotes Fig. 4b
T47239 191-192 -RRB- denotes )
T90969 194-200 VBN denotes Buried
T92849 201-209 NNS denotes residues
T78244 210-212 IN denotes on
T54331 213-217 NNS denotes SARS
T42940 218-221 VBD denotes had
T56294 222-226 JJ denotes mean
T46802 227-232 NN denotes dN/dS
T64331 233-239 NNS denotes ratios
T35591 240-242 IN denotes of
T4586 243-247 CD denotes 0.31
T68155 248-256 VBN denotes compared
T78948 257-261 IN denotes with
T78585 262-266 CD denotes 2.82
T27968 267-270 IN denotes for
T96310 271-278 VBN denotes exposed
T43288 279-286 NNS denotes resides
T92960 288-296 RB denotes Likewise
T14475 296-297 -COMMA- denotes ,
T32298 298-301 DT denotes the
T12634 302-308 VBN denotes buried
T80500 309-317 NNS denotes residues
T77635 318-320 IN denotes on
T24392 321-325 NNS denotes MERS
T2961 326-329 VBD denotes had
T6521 330-331 DT denotes a
T8471 332-342 VBN denotes calculated
T37460 343-348 NN denotes dN/dS
T55408 349-354 NN denotes ratio
T45120 355-357 IN denotes of
T23381 358-362 CD denotes 0.10
T30445 363-371 VBN denotes compared
T55016 372-376 IN denotes with
T1385 377-384 VBN denotes exposed
T65828 385-393 NNS denotes residues
T35353 394-398 IN denotes with
T91154 399-400 DT denotes a
T26380 401-406 NN denotes value
T92544 407-409 IN denotes of
T79406 410-414 CD denotes 0.45
T92418 416-427 RB denotes Furthermore
T91452 427-428 -COMMA- denotes ,
T84302 429-433 WRB denotes when
T74584 434-442 JJ denotes per-site
T76352 443-453 JJ denotes amino-acid
T98451 454-465 NNS denotes diversities
T72837 466-470 VBD denotes were
T54724 471-477 VBN denotes mapped
T45778 478-482 IN denotes onto
T98923 483-486 DT denotes the
T59533 487-492 RB denotes fully
T25862 493-505 VBN denotes glycosylated
T32515 506-516 JJ denotes structural
T94405 517-522 NN denotes model
T76643 523-525 IN denotes of
T13755 526-529 DT denotes the
T14482 530-540 JJ denotes respective
T65032 541-544 NN denotes CoV
T12704 545-546 NN denotes S
T70323 547-555 NNS denotes proteins
T33888 556-557 -LRB- denotes (
T60190 557-564 NN denotes Fig. 4c
T27628 564-565 -RRB- denotes )
T87038 565-566 -COMMA- denotes ,
T49843 567-575 NNS denotes hotspots
T77547 576-578 IN denotes of
T63244 579-588 NNS denotes mutations
T5765 589-593 VBD denotes were
T8574 594-605 VBN denotes highlighted
T21020 606-608 IN denotes on
T89986 609-612 DT denotes the
T65568 613-620 NN denotes protein
T63130 621-628 NN denotes surface
T96535 629-639 IN denotes throughout
T21467 640-643 DT denotes the
T66745 644-650 NN denotes trimer
T45284 651-660 VBG denotes revealing
T17381 661-670 JJ denotes extensive
T55156 671-686 NNS denotes vulnerabilities
T13067 687-697 VBG denotes permeating
T40910 698-705 IN denotes through
T14483 706-709 DT denotes the
T31354 846-847 NN denotes S
T92070 848-856 NNS denotes proteins
T5507 857-861 WDT denotes that
T19099 862-870 VBP denotes protrude
T77842 871-875 RB denotes away
T99218 876-880 IN denotes from
T68020 881-884 DT denotes the
T87267 885-892 NNS denotes glycans
T55216 894-896 PRP denotes We
T15548 897-902 MD denotes would
T19328 903-910 VB denotes suggest
T29556 710-716 NN denotes glycan
T94871 717-723 NN denotes shield
T71413 724-726 IN denotes of
T81413 727-731 NNS denotes SARS
T68523 732-735 CC denotes and
T70297 736-740 NNP denotes MERS
T12679 741-745 NNP denotes CoVs
T87216 747-749 PRP denotes It
T15902 750-752 VBZ denotes is
T6523 753-764 JJ denotes interesting
T19232 765-767 TO denotes to
T97839 768-772 VB denotes note
T99309 773-776 DT denotes the
T40498 777-781 NN denotes lack
T81866 782-784 IN denotes of
T9331 785-795 JJ denotes amino-acid
T44303 796-805 NN denotes diversity
T83531 806-808 IN denotes on
T76133 809-812 DT denotes the
T29918 813-829 JJ denotes receptor-binding
T15412 830-837 NNS denotes domains
T38048 838-840 IN denotes of
T48648 841-845 NNS denotes MERS
T73414 911-915 IN denotes that
T39503 916-920 DT denotes this
T1176 921-924 MD denotes may
T73192 925-931 VB denotes result
T18164 932-936 IN denotes from
T59646 937-940 DT denotes the
T56626 941-950 JJ denotes intrinsic
T77011 951-967 JJ denotes receptor-binding
T13068 968-981 NN denotes functionality
T25400 982-984 IN denotes of
T95940 985-990 DT denotes these
T4558 991-998 NNS denotes domains
R34568 T69499 T65163 arg1Of Analysis,of
R57790 T61369 T65163 arg2Of ratio,of
R44708 T61369 T23395 arg1Of ratio,the
R35799 T61369 T78947 arg1Of ratio,relative
R71053 T61369 T85886 arg1Of ratio,of
R48201 T72369 T85886 arg2Of substitutions,of
R88738 T13118 T53309 arg1Of synonymous,non-synonymous
R93094 T13118 T78726 arg1Of synonymous,to
R15619 T72369 T13118 arg1Of substitutions,synonymous
R7301 T72369 T63573 arg1Of substitutions,nucleotide
R64002 T72369 T18378 arg1Of substitutions,(
R11093 T10324 T18378 arg2Of ratios,(
R88392 T30580 T18378 arg3Of ),(
R93551 T10324 T58404 arg1Of ratios,i.e.
R6860 T10324 T58779 arg1Of ratios,dN/dS
R16925 T69499 T83087 arg1Of Analysis,revealed
R88573 T92287 T83087 arg2Of exhibited,revealed
R18139 T92287 T2494 arg1Of exhibited,that
R58586 T12652 T4328 arg2Of residues,exposed
R49381 T12652 T92287 arg1Of residues,exhibited
R70296 T59603 T92287 arg2Of values,exhibited
R97765 T11718 T88501 arg1Of higher,significantly
R56320 T59603 T11718 arg1Of values,higher
R34279 T59603 T86795 arg1Of values,dN/dS
R13531 T59603 T7211 arg1Of values,(
R2422 T4769 T7211 arg2Of Fig. 4b,(
R45689 T47239 T7211 arg3Of ),(
R37083 T92849 T90969 arg2Of residues,Buried
R38632 T92849 T78244 arg1Of residues,on
R45550 T54331 T78244 arg2Of SARS,on
R78533 T92849 T42940 arg1Of residues,had
R64905 T64331 T42940 arg2Of ratios,had
R7575 T64331 T56294 arg1Of ratios,mean
R3248 T64331 T46802 arg1Of ratios,dN/dS
R16314 T64331 T35591 arg1Of ratios,of
R34905 T4586 T35591 arg2Of 0.31,of
R48342 T64331 T68155 arg1Of ratios,compared
R50174 T78948 T68155 arg2Of with,compared
R94531 T78585 T78948 arg2Of 2.82,with
R68081 T78585 T27968 arg1Of 2.82,for
R39372 T43288 T27968 arg2Of resides,for
R11468 T43288 T96310 arg2Of resides,exposed
R24616 T2961 T92960 arg1Of had,Likewise
R68851 T2961 T14475 arg1Of had,","
R23393 T80500 T32298 arg1Of residues,the
R73701 T80500 T12634 arg2Of residues,buried
R77783 T80500 T77635 arg1Of residues,on
R5916 T24392 T77635 arg2Of MERS,on
R36158 T80500 T2961 arg1Of residues,had
R40924 T55408 T2961 arg2Of ratio,had
R22467 T55408 T6521 arg1Of ratio,a
R31129 T55408 T8471 arg2Of ratio,calculated
R44924 T55408 T37460 arg1Of ratio,dN/dS
R96796 T55408 T45120 arg1Of ratio,of
R69300 T23381 T45120 arg2Of 0.10,of
R90166 T2961 T30445 arg1Of had,compared
R30304 T55016 T30445 arg2Of with,compared
R12429 T65828 T55016 arg2Of residues,with
R1617 T65828 T1385 arg2Of residues,exposed
R52562 T65828 T35353 arg1Of residues,with
R41359 T26380 T35353 arg2Of value,with
R58840 T26380 T91154 arg1Of value,a
R3337 T26380 T92544 arg1Of value,of
R58419 T79406 T92544 arg2Of 0.45,of
R63445 T8574 T92418 arg1Of highlighted,Furthermore
R94598 T8574 T91452 arg1Of highlighted,","
R44950 T8574 T84302 arg1Of highlighted,when
R49097 T54724 T84302 arg2Of mapped,when
R15450 T98451 T74584 arg1Of diversities,per-site
R66839 T98451 T76352 arg1Of diversities,amino-acid
R15217 T98451 T72837 arg1Of diversities,were
R77763 T54724 T72837 arg2Of mapped,were
R37654 T98451 T54724 arg2Of diversities,mapped
R36115 T54724 T45778 arg1Of mapped,onto
R3433 T94405 T45778 arg2Of model,onto
R53298 T94405 T98923 arg1Of model,the
R43272 T25862 T59533 arg1Of glycosylated,fully
R50247 T94405 T25862 arg1Of model,glycosylated
R26701 T94405 T32515 arg1Of model,structural
R74679 T94405 T76643 arg1Of model,of
R51542 T70323 T76643 arg2Of proteins,of
R2173 T70323 T13755 arg1Of proteins,the
R85398 T70323 T14482 arg1Of proteins,respective
R51942 T70323 T65032 arg1Of proteins,CoV
R5341 T70323 T12704 arg1Of proteins,S
R68632 T70323 T33888 arg1Of proteins,(
R28101 T60190 T33888 arg2Of Fig. 4c,(
R79333 T27628 T33888 arg3Of ),(
R50373 T8574 T87038 arg1Of highlighted,","
R78452 T49843 T77547 arg1Of hotspots,of
R70051 T63244 T77547 arg2Of mutations,of
R86243 T49843 T5765 arg1Of hotspots,were
R62080 T8574 T5765 arg2Of highlighted,were
R36037 T49843 T8574 arg2Of hotspots,highlighted
R69989 T8574 T21020 arg1Of highlighted,on
R21042 T63130 T21020 arg2Of surface,on
R99168 T63130 T89986 arg1Of surface,the
R84573 T63130 T65568 arg1Of surface,protein
R18040 T8574 T96535 arg1Of highlighted,throughout
R83519 T66745 T96535 arg2Of trimer,throughout
R40238 T66745 T21467 arg1Of trimer,the
R11527 T66745 T45284 arg1Of trimer,revealing
R26362 T55156 T45284 arg2Of vulnerabilities,revealing
R13176 T55156 T17381 arg1Of vulnerabilities,extensive
R81127 T55156 T13067 arg1Of vulnerabilities,permeating
R91880 T13067 T40910 arg1Of permeating,through
R25217 T94871 T40910 arg2Of shield,through
R32001 T94871 T14483 arg1Of shield,the
R4994 T94871 T29556 arg1Of shield,glycan
R90788 T94871 T71413 arg1Of shield,of
R72986 T68523 T71413 arg2Of and,of
R8907 T81413 T68523 arg1Of SARS,and
R79279 T12679 T68523 arg2Of CoVs,and
R85917 T12679 T70297 arg1Of CoVs,MERS
R32448 T97839 T87216 arg1Of note,It
R64157 T97839 T15902 arg1Of note,is
R45114 T6523 T15902 arg2Of interesting,is
R15047 T97839 T6523 arg1Of note,interesting
R54914 T97839 T19232 arg1Of note,to
R93413 T40498 T97839 arg2Of lack,note
R52293 T40498 T99309 arg1Of lack,the
R68351 T40498 T81866 arg1Of lack,of
R25896 T44303 T81866 arg2Of diversity,of
R99374 T44303 T9331 arg1Of diversity,amino-acid
R59233 T40498 T83531 arg1Of lack,on
R54761 T15412 T83531 arg2Of domains,on
R30100 T15412 T76133 arg1Of domains,the
R78903 T15412 T29918 arg1Of domains,receptor-binding
R28428 T15412 T38048 arg1Of domains,of
R47308 T92070 T38048 arg2Of proteins,of
R6622 T92070 T48648 arg1Of proteins,MERS
R35155 T92070 T31354 arg1Of proteins,S
R48312 T15412 T5507 arg1Of domains,that
R78066 T15412 T19099 arg1Of domains,protrude
R50475 T19099 T77842 arg1Of protrude,away
R20046 T77842 T99218 arg1Of away,from
R97244 T87267 T99218 arg2Of glycans,from
R41837 T87267 T68020 arg1Of glycans,the
R75268 T55216 T15548 arg1Of We,would
R87991 T19328 T15548 arg2Of suggest,would
R19742 T55216 T19328 arg1Of We,suggest
R78169 T73192 T19328 arg2Of result,suggest
R66651 T73192 T73414 arg1Of result,that
R91245 T39503 T1176 arg1Of this,may
R29477 T73192 T1176 arg2Of result,may
R12670 T39503 T73192 arg1Of this,result
R29370 T73192 T18164 arg1Of result,from
R47689 T13068 T18164 arg2Of functionality,from
R40679 T13068 T59646 arg1Of functionality,the
R43019 T13068 T56626 arg1Of functionality,intrinsic
R94313 T13068 T77011 arg1Of functionality,receptor-binding
R21921 T13068 T25400 arg1Of functionality,of
R46751 T4558 T25400 arg2Of domains,of
R54397 T4558 T95940 arg1Of domains,these

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T92 63-73 Body_part denotes nucleotide http://purl.org/sig/ont/fma/fma82740
T93 443-453 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T94 547-555 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257
T95 613-620 Body_part denotes protein http://purl.org/sig/ont/fma/fma67257
T96 785-795 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T97 848-856 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T128 63-73 Chemical denotes nucleotide http://purl.obolibrary.org/obo/CHEBI_36976
T129 443-448 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T130 547-555 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T131 613-620 Chemical denotes protein http://purl.obolibrary.org/obo/CHEBI_36080
T132 785-790 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T133 848-856 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080
T134 885-892 Chemical denotes glycans http://purl.obolibrary.org/obo/CHEBI_18154

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T104 213-217 Species denotes SARS NCBItxid:694009
T105 321-325 Species denotes MERS NCBItxid:1335626
T106 727-731 Species denotes SARS NCBItxid:694009
T107 736-740 Species denotes MERS NCBItxid:1335626
T108 841-845 Species denotes MERS NCBItxid:1335626

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T90 0-193 Sentence denotes Analysis of the relative ratio of non-synonymous to synonymous nucleotide substitutions (i.e. dN/dS ratios) revealed that exposed residues exhibited significantly higher dN/dS values (Fig. 4b).
T91 194-287 Sentence denotes Buried residues on SARS had mean dN/dS ratios of 0.31 compared with 2.82 for exposed resides.
T92 288-415 Sentence denotes Likewise, the buried residues on MERS had a calculated dN/dS ratio of 0.10 compared with exposed residues with a value of 0.45.
T93 416-746 Sentence denotes Furthermore, when per-site amino-acid diversities were mapped onto the fully glycosylated structural model of the respective CoV S proteins (Fig. 4c), hotspots of mutations were highlighted on the protein surface throughout the trimer revealing extensive vulnerabilities permeating through the glycan shield of SARS and MERS CoVs.
T94 747-893 Sentence denotes It is interesting to note the lack of amino-acid diversity on the receptor-binding domains of MERS S proteins that protrude away from the glycans.
T95 894-999 Sentence denotes We would suggest that this may result from the intrinsic receptor-binding functionality of these domains.

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T50 213-217 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091
T51 727-731 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
558 94-96 Chemical denotes dN MESH:C022306
559 97-99 Chemical denotes dS MESH:D003903
560 170-172 Chemical denotes dN MESH:C022306
561 173-175 Chemical denotes dS MESH:D003903
568 213-217 Disease denotes SARS MESH:D045169
562 227-229 Chemical denotes dN MESH:C022306
563 230-232 Chemical denotes dS MESH:D003903
569 321-325 Disease denotes MERS MESH:D018352
564 343-345 Chemical denotes dN MESH:C022306
565 346-348 Chemical denotes dS MESH:D003903
556 541-544 Species denotes CoV Tax:11118
566 710-716 Chemical denotes glycan MESH:D011134
570 727-731 Disease denotes SARS MESH:D045169
557 736-745 Species denotes MERS CoVs Tax:1335626
571 841-845 Disease denotes MERS MESH:D018352
567 885-892 Chemical denotes glycans MESH:D011134

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T3703 545-555 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9
T3736 846-856 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T90 0-193 Sentence denotes Analysis of the relative ratio of non-synonymous to synonymous nucleotide substitutions (i.e. dN/dS ratios) revealed that exposed residues exhibited significantly higher dN/dS values (Fig. 4b).
T91 194-287 Sentence denotes Buried residues on SARS had mean dN/dS ratios of 0.31 compared with 2.82 for exposed resides.
T92 288-415 Sentence denotes Likewise, the buried residues on MERS had a calculated dN/dS ratio of 0.10 compared with exposed residues with a value of 0.45.
T93 416-746 Sentence denotes Furthermore, when per-site amino-acid diversities were mapped onto the fully glycosylated structural model of the respective CoV S proteins (Fig. 4c), hotspots of mutations were highlighted on the protein surface throughout the trimer revealing extensive vulnerabilities permeating through the glycan shield of SARS and MERS CoVs.
T94 747-893 Sentence denotes It is interesting to note the lack of amino-acid diversity on the receptor-binding domains of MERS S proteins that protrude away from the glycans.
T95 894-999 Sentence denotes We would suggest that this may result from the intrinsic receptor-binding functionality of these domains.