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PMC:7253482 / 14322-14652 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
533 151-154 Species denotes CoV Tax:11118

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T87 203-213 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T88 228-236 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T85 10-17 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T86 203-222 http://purl.obolibrary.org/obo/CHEBI_33708 denotes amino-acid residues
T87 203-222 http://purl.obolibrary.org/obo/PR_000036907 denotes amino-acid residues

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T164 183-190 Chemical denotes solvent http://purl.obolibrary.org/obo/CHEBI_46787
T165 203-222 Chemical denotes amino-acid residues http://purl.obolibrary.org/obo/CHEBI_33708
T166 203-208 Chemical denotes amino http://purl.obolibrary.org/obo/CHEBI_46882
T167 209-213 Chemical denotes acid http://purl.obolibrary.org/obo/CHEBI_37527
T168 228-236 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-IDO

Id Subject Object Predicate Lexical cue
T37 10-17 http://purl.obolibrary.org/obo/NCBITaxon_10239 denotes viruses
T38 107-120 http://purl.obolibrary.org/obo/BFO_0000034 denotes functionality

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T8489 4-9 JJ denotes other
T86129 10-17 NNS denotes viruses
T10448 18-21 VBP denotes are
T85155 22-26 JJ denotes able
T10897 27-29 TO denotes to
T93372 30-41 VB denotes accommodate
T42685 42-45 DT denotes the
T16612 46-64 JJ denotes post-translational
T29096 65-78 NNS denotes modifications
T68645 78-79 -COMMA- denotes ,
T93438 80-87 IN denotes without
T18466 88-95 RB denotes greatly
T85948 96-106 VBG denotes perturbing
T35584 107-120 NN denotes functionality
T9810 123-131 NN denotes Sequence
T60681 132-147 NN denotes diversification
T14534 148-150 IN denotes of
T70071 151-154 NN denotes CoV
T46208 155-161 NNS denotes spikes
T65633 162-164 PRP denotes We
T71210 165-177 VBD denotes hypothesized
T65773 178-182 IN denotes that
T55109 183-201 JJ denotes solvent-accessible
T1585 201-202 -COMMA- denotes ,
T39672 203-213 JJ denotes amino-acid
T20594 214-222 NNS denotes residues
T55010 223-225 IN denotes on
T92344 226-227 NN denotes S
T27449 228-236 NNS denotes proteins
T7753 237-242 MD denotes would
T87805 243-245 VB denotes be
T76109 246-256 VBG denotes undergoing
T49022 257-263 JJR denotes higher
T38215 264-269 NNS denotes rates
T48007 270-272 IN denotes of
T86087 273-282 NNS denotes mutations
T52952 283-291 VBN denotes compared
T99241 292-296 IN denotes with
T30950 297-303 JJ denotes buried
T25052 304-312 NNS denotes residues
T46492 313-316 CC denotes and
T57528 317-324 NNS denotes regions
T50177 325-329 WDT denotes that
R47162 T86129 T8489 arg1Of viruses,other
R49164 T86129 T10448 arg1Of viruses,are
R94272 T85155 T10448 arg2Of able,are
R79979 T86129 T85155 arg1Of viruses,able
R97251 T93372 T85155 arg2Of accommodate,able
R79103 T93372 T10897 arg1Of accommodate,to
R97857 T86129 T93372 arg1Of viruses,accommodate
R99255 T29096 T93372 arg2Of modifications,accommodate
R1410 T29096 T42685 arg1Of modifications,the
R68581 T29096 T16612 arg1Of modifications,post-translational
R90371 T10448 T68645 arg1Of are,","
R65530 T10448 T93438 arg1Of are,without
R3419 T85948 T93438 arg2Of perturbing,without
R11432 T85948 T18466 arg1Of perturbing,greatly
R44377 T86129 T85948 arg1Of viruses,perturbing
R68677 T35584 T85948 arg2Of functionality,perturbing
R38141 T60681 T9810 arg1Of diversification,Sequence
R72145 T60681 T14534 arg1Of diversification,of
R69926 T46208 T14534 arg2Of spikes,of
R24936 T46208 T70071 arg1Of spikes,CoV
R61681 T65633 T71210 arg1Of We,hypothesized
R96091 T76109 T71210 arg2Of undergoing,hypothesized
R22162 T76109 T65773 arg1Of undergoing,that
R85221 T20594 T55109 arg1Of residues,solvent-accessible
R72861 T55109 T1585 arg1Of solvent-accessible,","
R77034 T39672 T1585 arg2Of amino-acid,","
R36891 T20594 T39672 arg1Of residues,amino-acid
R40189 T20594 T55010 arg1Of residues,on
R95749 T27449 T55010 arg2Of proteins,on
R96156 T27449 T92344 arg1Of proteins,S
R72203 T20594 T7753 arg1Of residues,would
R54302 T76109 T7753 arg2Of undergoing,would
R95941 T20594 T87805 arg1Of residues,be
R17994 T76109 T87805 arg2Of undergoing,be
R16092 T20594 T76109 arg1Of residues,undergoing
R25200 T38215 T76109 arg2Of rates,undergoing
R60609 T38215 T49022 arg1Of rates,higher
R64991 T38215 T48007 arg1Of rates,of
R81741 T86087 T48007 arg2Of mutations,of
R95788 T76109 T52952 arg1Of undergoing,compared
R82820 T99241 T52952 arg2Of with,compared
R28386 T46492 T99241 arg2Of and,with
R5522 T46492 T30950 arg1Of and,buried
R56973 T25052 T46492 arg1Of residues,and
R46016 T57528 T46492 arg2Of regions,and
R56933 T46492 T50177 arg1Of and,that

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T86 203-213 Body_part denotes amino-acid http://purl.org/sig/ont/fma/fma82739
T87 228-236 Body_part denotes proteins http://purl.org/sig/ont/fma/fma67257

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T122 203-222 Chemical denotes amino-acid residues http://purl.obolibrary.org/obo/CHEBI_33708
T123 228-236 Chemical denotes proteins http://purl.obolibrary.org/obo/CHEBI_36080

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T101 10-17 Species denotes viruses NCBItxid:10239

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T86 123-161 Sentence denotes Sequence diversification of CoV spikes

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
533 151-154 Species denotes CoV Tax:11118

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T3670 226-236 Protein denotes S proteins https://www.uniprot.org/uniprot/Q9UIP0|https://www.uniprot.org/uniprot/Q9UIN9|https://www.uniprot.org/uniprot/Q9UIN8|https://www.uniprot.org/uniprot/Q9UIN7|https://www.uniprot.org/uniprot/Q9UIN6|https://www.uniprot.org/uniprot/Q9UBH8|https://www.uniprot.org/uniprot/Q9NRH8|https://www.uniprot.org/uniprot/Q9NRH7|https://www.uniprot.org/uniprot/Q9NRH6|https://www.uniprot.org/uniprot/Q9NRH5|https://www.uniprot.org/uniprot/Q9NRH4|https://www.uniprot.org/uniprot/Q9NPG5|https://www.uniprot.org/uniprot/Q9NPE0|https://www.uniprot.org/uniprot/Q9NP52|https://www.uniprot.org/uniprot/Q95IF9|https://www.uniprot.org/uniprot/Q8N5P3|https://www.uniprot.org/uniprot/Q8IZU6|https://www.uniprot.org/uniprot/Q8IZU5|https://www.uniprot.org/uniprot/Q8IZU4|https://www.uniprot.org/uniprot/Q86Z04|https://www.uniprot.org/uniprot/Q7YR44|https://www.uniprot.org/uniprot/Q7LA71|https://www.uniprot.org/uniprot/Q7LA70|https://www.uniprot.org/uniprot/Q5STD2|https://www.uniprot.org/uniprot/Q5SQ85|https://www.uniprot.org/uniprot/Q1XI16|https://www.uniprot.org/uniprot/Q1XI12|https://www.uniprot.org/uniprot/Q15517|https://www.uniprot.org/uniprot/O43509|https://www.uniprot.org/uniprot/O19084|https://www.uniprot.org/uniprot/B0UYZ7|https://www.uniprot.org/uniprot/B0S7V2|https://www.uniprot.org/uniprot/A5A6L9

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T34 46-78 http://purl.obolibrary.org/obo/GO_0043687 denotes post-translational modifications

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T31 46-78 http://purl.obolibrary.org/obo/GO_0043687 denotes post-translational modifications

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T35 46-78 http://purl.obolibrary.org/obo/GO_0043687 denotes post-translational modifications

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T86 123-161 Sentence denotes Sequence diversification of CoV spikes