PMC:7253482 / 13537-13905
Annnotations
LitCovid-PubTator
{"project":"LitCovid-PubTator","denotations":[{"id":"499","span":{"begin":145,"end":158},"obj":"Species"},{"id":"506","span":{"begin":2,"end":8},"obj":"Chemical"},{"id":"507","span":{"begin":62,"end":74},"obj":"Chemical"},{"id":"508","span":{"begin":80,"end":87},"obj":"Chemical"},{"id":"509","span":{"begin":211,"end":218},"obj":"Chemical"},{"id":"511","span":{"begin":43,"end":47},"obj":"Disease"}],"attributes":[{"id":"A499","pred":"tao:has_database_id","subj":"499","obj":"Tax:11118"},{"id":"A506","pred":"tao:has_database_id","subj":"506","obj":"MESH:D011134"},{"id":"A508","pred":"tao:has_database_id","subj":"508","obj":"MESH:D011134"},{"id":"A509","pred":"tao:has_database_id","subj":"509","obj":"MESH:D011134"},{"id":"A511","pred":"tao:has_database_id","subj":"511","obj":"MESH:D018352"}],"namespaces":[{"prefix":"Tax","uri":"https://www.ncbi.nlm.nih.gov/taxonomy/"},{"prefix":"MESH","uri":"https://id.nlm.nih.gov/mesh/"},{"prefix":"Gene","uri":"https://www.ncbi.nlm.nih.gov/gene/"},{"prefix":"CVCL","uri":"https://web.expasy.org/cellosaurus/CVCL_"}],"text":"e glycan-influenced processing observed on MERS. Importantly, oligomannose-type glycans has also been implicated in innate immune recognition of coronaviruses by lectins47,48 that recognise these underprocessed glycans as pathogen-associated molecular patterns.\nGiven that the receptor-binding domain is the main target of neutralising antibodies8, it is surprising th"}
LitCovid-PD-CLO
{"project":"LitCovid-PD-CLO","denotations":[{"id":"T84","span":{"begin":88,"end":91},"obj":"http://purl.obolibrary.org/obo/CLO_0051582"}],"text":"e glycan-influenced processing observed on MERS. Importantly, oligomannose-type glycans has also been implicated in innate immune recognition of coronaviruses by lectins47,48 that recognise these underprocessed glycans as pathogen-associated molecular patterns.\nGiven that the receptor-binding domain is the main target of neutralising antibodies8, it is surprising th"}
LitCovid-PD-CHEBI
{"project":"LitCovid-PD-CHEBI","denotations":[{"id":"T159","span":{"begin":80,"end":87},"obj":"Chemical"},{"id":"T160","span":{"begin":211,"end":218},"obj":"Chemical"}],"attributes":[{"id":"A159","pred":"chebi_id","subj":"T159","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"id":"A160","pred":"chebi_id","subj":"T160","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"}],"text":"e glycan-influenced processing observed on MERS. Importantly, oligomannose-type glycans has also been implicated in innate immune recognition of coronaviruses by lectins47,48 that recognise these underprocessed glycans as pathogen-associated molecular patterns.\nGiven that the receptor-binding domain is the main target of neutralising antibodies8, it is surprising th"}
LitCovid-sample-PD-IDO
{"project":"LitCovid-sample-PD-IDO","denotations":[{"id":"T33","span":{"begin":222,"end":230},"obj":"http://purl.obolibrary.org/obo/IDO_0000528"}],"text":"e glycan-influenced processing observed on MERS. Importantly, oligomannose-type glycans has also been implicated in innate immune recognition of coronaviruses by lectins47,48 that recognise these underprocessed glycans as pathogen-associated molecular patterns.\nGiven that the receptor-binding domain is the main target of neutralising antibodies8, it is surprising th"}
LitCovid-sample-Enju
{"project":"LitCovid-sample-Enju","denotations":[{"id":"T52429","span":{"begin":2,"end":19},"obj":"JJ"},{"id":"T84994","span":{"begin":20,"end":30},"obj":"NN"},{"id":"T28395","span":{"begin":31,"end":39},"obj":"VBN"},{"id":"T8259","span":{"begin":40,"end":42},"obj":"IN"},{"id":"T19314","span":{"begin":43,"end":47},"obj":"NNS"},{"id":"T3743","span":{"begin":49,"end":60},"obj":"RB"},{"id":"T69555","span":{"begin":60,"end":61},"obj":"-COMMA-"},{"id":"T70877","span":{"begin":62,"end":79},"obj":"JJ"},{"id":"T68539","span":{"begin":80,"end":87},"obj":"NNS"},{"id":"T79414","span":{"begin":88,"end":91},"obj":"VBZ"},{"id":"T32823","span":{"begin":92,"end":96},"obj":"RB"},{"id":"T22023","span":{"begin":97,"end":101},"obj":"VBN"},{"id":"T1963","span":{"begin":102,"end":112},"obj":"VBN"},{"id":"T31422","span":{"begin":113,"end":115},"obj":"IN"},{"id":"T32938","span":{"begin":116,"end":122},"obj":"JJ"},{"id":"T8288","span":{"begin":123,"end":129},"obj":"JJ"},{"id":"T72195","span":{"begin":130,"end":141},"obj":"NN"},{"id":"T78182","span":{"begin":142,"end":144},"obj":"IN"},{"id":"T13186","span":{"begin":145,"end":158},"obj":"NNS"},{"id":"T90164","span":{"begin":159,"end":161},"obj":"IN"},{"id":"T84232","span":{"begin":162,"end":174},"obj":"NN"},{"id":"T65100","span":{"begin":175,"end":179},"obj":"WDT"},{"id":"T10378","span":{"begin":180,"end":189},"obj":"VBP"},{"id":"T13519","span":{"begin":190,"end":195},"obj":"DT"},{"id":"T42882","span":{"begin":196,"end":210},"obj":"VBN"},{"id":"T52825","span":{"begin":211,"end":218},"obj":"NNS"},{"id":"T46370","span":{"begin":219,"end":221},"obj":"IN"},{"id":"T72183","span":{"begin":222,"end":241},"obj":"JJ"},{"id":"T32276","span":{"begin":242,"end":251},"obj":"JJ"},{"id":"T39921","span":{"begin":252,"end":260},"obj":"NNS"},{"id":"T46731","span":{"begin":262,"end":267},"obj":"VBN"},{"id":"T24648","span":{"begin":268,"end":272},"obj":"IN"},{"id":"T45765","span":{"begin":273,"end":276},"obj":"DT"},{"id":"T56881","span":{"begin":277,"end":293},"obj":"JJ"},{"id":"T98112","span":{"begin":294,"end":300},"obj":"NN"},{"id":"T74716","span":{"begin":301,"end":303},"obj":"VBZ"},{"id":"T85598","span":{"begin":304,"end":307},"obj":"DT"},{"id":"T16051","span":{"begin":308,"end":312},"obj":"JJ"},{"id":"T58379","span":{"begin":313,"end":319},"obj":"NN"},{"id":"T53325","span":{"begin":320,"end":322},"obj":"IN"},{"id":"T7859","span":{"begin":323,"end":335},"obj":"VBG"},{"id":"T26958","span":{"begin":336,"end":347},"obj":"NN"},{"id":"T7334","span":{"begin":347,"end":348},"obj":"-COMMA-"},{"id":"T85070","span":{"begin":349,"end":351},"obj":"PRP"},{"id":"T1822","span":{"begin":352,"end":354},"obj":"VBZ"},{"id":"T40337","span":{"begin":355,"end":365},"obj":"JJ"}],"relations":[{"id":"R96677","pred":"arg1Of","subj":"T84994","obj":"T52429"},{"id":"R30561","pred":"arg2Of","subj":"T84994","obj":"T28395"},{"id":"R56810","pred":"arg1Of","subj":"T28395","obj":"T8259"},{"id":"R58705","pred":"arg2Of","subj":"T19314","obj":"T8259"},{"id":"R64614","pred":"arg1Of","subj":"T1963","obj":"T3743"},{"id":"R45481","pred":"arg1Of","subj":"T1963","obj":"T69555"},{"id":"R68327","pred":"arg1Of","subj":"T68539","obj":"T70877"},{"id":"R23849","pred":"arg1Of","subj":"T68539","obj":"T79414"},{"id":"R49756","pred":"arg2Of","subj":"T1963","obj":"T79414"},{"id":"R38082","pred":"arg1Of","subj":"T1963","obj":"T32823"},{"id":"R14674","pred":"arg1Of","subj":"T68539","obj":"T22023"},{"id":"R42646","pred":"arg2Of","subj":"T1963","obj":"T22023"},{"id":"R19684","pred":"arg1Of","subj":"T84232","obj":"T1963"},{"id":"R96045","pred":"arg2Of","subj":"T68539","obj":"T1963"},{"id":"R70110","pred":"arg1Of","subj":"T1963","obj":"T31422"},{"id":"R69140","pred":"arg2Of","subj":"T72195","obj":"T31422"},{"id":"R47847","pred":"arg1Of","subj":"T72195","obj":"T32938"},{"id":"R21261","pred":"arg1Of","subj":"T72195","obj":"T8288"},{"id":"R27517","pred":"arg1Of","subj":"T72195","obj":"T78182"},{"id":"R93623","pred":"arg2Of","subj":"T13186","obj":"T78182"},{"id":"R7917","pred":"arg2Of","subj":"T84232","obj":"T90164"},{"id":"R94251","pred":"arg1Of","subj":"T84232","obj":"T65100"},{"id":"R78991","pred":"arg1Of","subj":"T84232","obj":"T10378"},{"id":"R71368","pred":"arg2Of","subj":"T52825","obj":"T10378"},{"id":"R90040","pred":"arg1Of","subj":"T52825","obj":"T13519"},{"id":"R93032","pred":"arg2Of","subj":"T52825","obj":"T42882"},{"id":"R12169","pred":"arg1Of","subj":"T10378","obj":"T46370"},{"id":"R12669","pred":"arg2Of","subj":"T39921","obj":"T46370"},{"id":"R33706","pred":"arg1Of","subj":"T39921","obj":"T72183"},{"id":"R25166","pred":"arg1Of","subj":"T39921","obj":"T32276"},{"id":"R19912","pred":"arg2Of","subj":"T74716","obj":"T46731"},{"id":"R72618","pred":"modOf","subj":"T1822","obj":"T46731"},{"id":"R28846","pred":"arg1Of","subj":"T74716","obj":"T24648"},{"id":"R73554","pred":"arg1Of","subj":"T98112","obj":"T45765"},{"id":"R85720","pred":"arg1Of","subj":"T98112","obj":"T56881"},{"id":"R85326","pred":"arg1Of","subj":"T98112","obj":"T74716"},{"id":"R10483","pred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glycan-influenced processing observed on MERS. Importantly, oligomannose-type glycans has also been implicated in innate immune recognition of coronaviruses by lectins47,48 that recognise these underprocessed glycans as pathogen-associated molecular patterns.\nGiven that the receptor-binding domain is the main target of neutralising antibodies8, it is surprising th"}
LitCovid-sample-CHEBI
{"project":"LitCovid-sample-CHEBI","denotations":[{"id":"T117","span":{"begin":80,"end":87},"obj":"Chemical"},{"id":"T118","span":{"begin":211,"end":218},"obj":"Chemical"}],"attributes":[{"id":"A117","pred":"chebi_id","subj":"T117","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"},{"id":"A118","pred":"chebi_id","subj":"T118","obj":"http://purl.obolibrary.org/obo/CHEBI_18154"}],"text":"e glycan-influenced processing observed on MERS. Importantly, oligomannose-type glycans has also been implicated in innate immune recognition of coronaviruses by lectins47,48 that recognise these underprocessed glycans as pathogen-associated molecular patterns.\nGiven that the receptor-binding domain is the main target of neutralising antibodies8, it is surprising th"}
LitCovid-sample-PD-NCBITaxon
{"project":"LitCovid-sample-PD-NCBITaxon","denotations":[{"id":"T95","span":{"begin":43,"end":47},"obj":"Species"}],"attributes":[{"id":"A95","pred":"ncbi_taxonomy_id","subj":"T95","obj":"NCBItxid:1335626"}],"namespaces":[{"prefix":"NCBItxid","uri":"http://purl.bioontology.org/ontology/NCBITAXON/"}],"text":"e glycan-influenced processing observed on MERS. Importantly, oligomannose-type glycans has also been implicated in innate immune recognition of coronaviruses by lectins47,48 that recognise these underprocessed glycans as pathogen-associated molecular patterns.\nGiven that the receptor-binding domain is the main target of neutralising antibodies8, it is surprising th"}
LitCovid-sample-sentences
{"project":"LitCovid-sample-sentences","denotations":[{"id":"T83","span":{"begin":49,"end":261},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"e glycan-influenced processing observed on MERS. Importantly, oligomannose-type glycans has also been implicated in innate immune recognition of coronaviruses by lectins47,48 that recognise these underprocessed glycans as pathogen-associated molecular patterns.\nGiven that the receptor-binding domain is the main target of neutralising antibodies8, it is surprising th"}
LitCovid-sample-Pubtator
{"project":"LitCovid-sample-Pubtator","denotations":[{"id":"506","span":{"begin":2,"end":8},"obj":"Chemical"},{"id":"511","span":{"begin":43,"end":47},"obj":"Disease"},{"id":"507","span":{"begin":62,"end":74},"obj":"Chemical"},{"id":"508","span":{"begin":80,"end":87},"obj":"Chemical"},{"id":"499","span":{"begin":145,"end":158},"obj":"Species"},{"id":"509","span":{"begin":211,"end":218},"obj":"Chemical"}],"attributes":[{"id":"A506","pred":"pubann:denotes","subj":"506","obj":"MESH:D011134"},{"id":"A511","pred":"pubann:denotes","subj":"511","obj":"MESH:D018352"},{"id":"A508","pred":"pubann:denotes","subj":"508","obj":"MESH:D011134"},{"id":"A499","pred":"pubann:denotes","subj":"499","obj":"Tax:11118"},{"id":"A509","pred":"pubann:denotes","subj":"509","obj":"MESH:D011134"}],"text":"e glycan-influenced processing observed on MERS. Importantly, oligomannose-type glycans has also been implicated in innate immune recognition of coronaviruses by lectins47,48 that recognise these underprocessed glycans as pathogen-associated molecular patterns.\nGiven that the receptor-binding domain is the main target of neutralising antibodies8, it is surprising th"}
LitCovid-sample-PD-GO-BP-0
{"project":"LitCovid-sample-PD-GO-BP-0","denotations":[{"id":"T33","span":{"begin":116,"end":129},"obj":"http://purl.obolibrary.org/obo/GO_0045087"}],"text":"e glycan-influenced processing observed on MERS. Importantly, oligomannose-type glycans has also been implicated in innate immune recognition of coronaviruses by lectins47,48 that recognise these underprocessed glycans as pathogen-associated molecular patterns.\nGiven that the receptor-binding domain is the main target of neutralising antibodies8, it is surprising th"}
LitCovid-sample-GO-BP
{"project":"LitCovid-sample-GO-BP","denotations":[{"id":"T30","span":{"begin":116,"end":129},"obj":"http://purl.obolibrary.org/obo/GO_0045087"}],"text":"e glycan-influenced processing observed on MERS. Importantly, oligomannose-type glycans has also been implicated in innate immune recognition of coronaviruses by lectins47,48 that recognise these underprocessed glycans as pathogen-associated molecular patterns.\nGiven that the receptor-binding domain is the main target of neutralising antibodies8, it is surprising th"}
LitCovid-PD-GO-BP
{"project":"LitCovid-PD-GO-BP","denotations":[{"id":"T34","span":{"begin":116,"end":129},"obj":"http://purl.obolibrary.org/obo/GO_0045087"}],"text":"e glycan-influenced processing observed on MERS. Importantly, oligomannose-type glycans has also been implicated in innate immune recognition of coronaviruses by lectins47,48 that recognise these underprocessed glycans as pathogen-associated molecular patterns.\nGiven that the receptor-binding domain is the main target of neutralising antibodies8, it is surprising th"}
LitCovid-sentences
{"project":"LitCovid-sentences","denotations":[{"id":"T83","span":{"begin":49,"end":261},"obj":"Sentence"}],"namespaces":[{"prefix":"_base","uri":"http://pubannotation.org/ontology/tao.owl#"}],"text":"e glycan-influenced processing observed on MERS. Importantly, oligomannose-type glycans has also been implicated in innate immune recognition of coronaviruses by lectins47,48 that recognise these underprocessed glycans as pathogen-associated molecular patterns.\nGiven that the receptor-binding domain is the main target of neutralising antibodies8, it is surprising th"}