PMC:7253482 / 12321-12660
Annnotations
LitCovid-PubTator
Id | Subject | Object | Predicate | Lexical cue | tao:has_database_id |
---|---|---|---|---|---|
394 | 156-160 | Disease | denotes | SARS | MESH:D045169 |
395 | 165-169 | Disease | denotes | MERS | MESH:D018352 |
410 | 204-208 | Disease | denotes | SARS | MESH:D045169 |
411 | 213-217 | Disease | denotes | MERS | MESH:D018352 |
LitCovid-PD-FMA-UBERON
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T74 | 113-123 | Body_part | denotes | Amino-acid | http://purl.org/sig/ont/fma/fma82739 |
T75 | 180-190 | Body_part | denotes | Amino-acid | http://purl.org/sig/ont/fma/fma82739 |
T76 | 220-224 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
LitCovid-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T46 | 156-160 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T47 | 204-208 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-PD-CLO
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T75 | 35-37 | http://purl.obolibrary.org/obo/CLO_0050050 | denotes | S1 |
T76 | 42-44 | http://purl.obolibrary.org/obo/CLO_0008922 | denotes | S2 |
T77 | 42-44 | http://purl.obolibrary.org/obo/CLO_0050052 | denotes | S2 |
T78 | 178-179 | http://purl.obolibrary.org/obo/CLO_0001020 | denotes | a |
T79 | 220-224 | http://purl.obolibrary.org/obo/OGG_0000000002 | denotes | gene |
T80 | 290-291 | http://purl.obolibrary.org/obo/CLO_0001021 | denotes | b |
LitCovid-PD-CHEBI
Id | Subject | Object | Predicate | Lexical cue | chebi_id |
---|---|---|---|---|---|
T140 | 42-44 | Chemical | denotes | S2 | http://purl.obolibrary.org/obo/CHEBI_29387 |
T141 | 119-123 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
T142 | 186-190 | Chemical | denotes | acid | http://purl.obolibrary.org/obo/CHEBI_37527 |
T143 | 306-308 | Chemical | denotes | dN | http://purl.obolibrary.org/obo/CHEBI_33793 |
LitCovid-sample-MedDRA
Id | Subject | Object | Predicate | Lexical cue | meddra_id |
---|---|---|---|---|---|
T3 | 220-234 | http://purl.bioontology.org/ontology/MEDDRA/10022891 | denotes | gene sequences | http://purl.bioontology.org/ontology/MEDDRA/10069604 |
LitCovid-sample-Enju
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T74428 | 218-219 | NN | denotes | S |
T21364 | 220-224 | NN | denotes | gene |
T75679 | 225-234 | NNS | denotes | sequences |
T91293 | 236-244 | JJ | denotes | Averaged |
T25884 | 245-251 | NNS | denotes | values |
T75654 | 252-255 | IN | denotes | for |
T60028 | 256-260 | DT | denotes | each |
T46478 | 261-267 | NN | denotes | domain |
T85913 | 268-271 | VBP | denotes | are |
T30619 | 272-276 | RB | denotes | also |
T89591 | 277-282 | VBN | denotes | shown |
T64910 | 283-289 | IN | denotes | below. |
T95898 | 290-291 | NN | denotes | b |
T29035 | 292-302 | NN | denotes | Comparison |
T92542 | 303-305 | IN | denotes | of |
T58043 | 306-311 | NN | denotes | dN/dS |
T67622 | 312-318 | NNS | denotes | values |
T30617 | 319-326 | IN | denotes | between |
T22042 | 327-333 | VBN | denotes | buried |
T36252 | 334-337 | CC | denotes | and |
T3547 | 0-1 | -COMMA- | denotes | , |
T34630 | 2-5 | VBP | denotes | are |
T48779 | 6-15 | VBN | denotes | indicated |
T50978 | 16-18 | IN | denotes | in |
T62580 | 19-24 | NN | denotes | light |
T99144 | 25-29 | NN | denotes | blue |
T43036 | 31-34 | DT | denotes | The |
T72864 | 35-37 | NN | denotes | S1 |
T60407 | 38-41 | CC | denotes | and |
T63087 | 42-44 | NN | denotes | S2 |
T35349 | 45-53 | NNS | denotes | subunits |
T29813 | 54-57 | VBP | denotes | are |
T72291 | 58-65 | VBN | denotes | colored |
T28888 | 66-71 | JJ | denotes | light |
T2559 | 72-76 | JJ | denotes | grey |
T24147 | 77-80 | CC | denotes | and |
T73178 | 81-85 | JJ | denotes | dark |
T95495 | 86-90 | NN | denotes | grey |
T87030 | 90-91 | -COMMA- | denotes | , |
T42416 | 92-104 | RB | denotes | respectively |
T86019 | 106-110 | NNP | denotes | Fig. |
T3693 | 111-112 | CD | denotes | 4 |
T11619 | 113-123 | JJ | denotes | Amino-acid |
T79527 | 124-132 | NN | denotes | sequence |
T16112 | 133-148 | NN | denotes | diversification |
T17730 | 149-155 | IN | denotes | across |
T51516 | 156-160 | NNS | denotes | SARS |
T64040 | 161-164 | CC | denotes | and |
T54827 | 165-169 | NNS | denotes | MERS |
T40726 | 170-176 | NNS | denotes | spikes |
T4452 | 178-179 | DT | denotes | a |
T8758 | 180-190 | JJ | denotes | Amino-acid |
T82356 | 191-200 | NN | denotes | diversity |
T87134 | 201-203 | IN | denotes | in |
T33615 | 204-208 | NNS | denotes | SARS |
T87940 | 209-212 | CC | denotes | and |
T96992 | 213-217 | NNS | denotes | MERS |
R33721 | T48779 | T3547 | arg1Of | indicated,"," |
R36430 | T48779 | T34630 | arg2Of | indicated,are |
R48801 | T48779 | T50978 | arg1Of | indicated,in |
R99054 | T99144 | T50978 | arg2Of | blue,in |
R9602 | T99144 | T62580 | arg1Of | blue,light |
R40578 | T35349 | T43036 | arg1Of | subunits,The |
R13402 | T35349 | T72864 | arg1Of | subunits,S1 |
R82455 | T72864 | T60407 | arg1Of | S1,and |
R25568 | T63087 | T60407 | arg2Of | S2,and |
R41821 | T35349 | T63087 | arg1Of | subunits,S2 |
R87779 | T35349 | T29813 | arg1Of | subunits,are |
R25857 | T72291 | T29813 | arg2Of | colored,are |
R18448 | T35349 | T72291 | arg2Of | subunits,colored |
R98204 | T95495 | T72291 | arg3Of | grey,colored |
R35270 | T95495 | T28888 | arg1Of | grey,light |
R10534 | T95495 | T2559 | arg1Of | grey,grey |
R4632 | T2559 | T24147 | arg1Of | grey,and |
R22049 | T73178 | T24147 | arg2Of | dark,and |
R15613 | T95495 | T73178 | arg1Of | grey,dark |
R18285 | T72291 | T87030 | arg1Of | colored,"," |
R49825 | T72291 | T42416 | arg1Of | colored,respectively |
R86433 | T16112 | T86019 | arg1Of | diversification,Fig. |
R52294 | T86019 | T3693 | arg1Of | Fig.,4 |
R49617 | T16112 | T11619 | arg1Of | diversification,Amino-acid |
R2996 | T16112 | T79527 | arg1Of | diversification,sequence |
R28693 | T16112 | T17730 | arg1Of | diversification,across |
R87652 | T64040 | T17730 | arg2Of | and,across |
R54886 | T51516 | T64040 | arg1Of | SARS,and |
R47263 | T40726 | T64040 | arg2Of | spikes,and |
R45865 | T40726 | T54827 | arg1Of | spikes,MERS |
R86898 | T82356 | T4452 | arg1Of | diversity,a |
R15307 | T82356 | T8758 | arg1Of | diversity,Amino-acid |
R83368 | T82356 | T87134 | arg1Of | diversity,in |
R36844 | T87940 | T87134 | arg2Of | and,in |
R3781 | T33615 | T87940 | arg1Of | SARS,and |
R86836 | T75679 | T87940 | arg2Of | sequences,and |
R82172 | T75679 | T96992 | arg1Of | sequences,MERS |
R67284 | T75679 | T74428 | arg1Of | sequences,S |
R90505 | T75679 | T21364 | arg1Of | sequences,gene |
R47914 | T25884 | T91293 | arg1Of | values,Averaged |
R92531 | T25884 | T75654 | arg1Of | values,for |
R97660 | T46478 | T75654 | arg2Of | domain,for |
R18524 | T46478 | T60028 | arg1Of | domain,each |
R12507 | T25884 | T85913 | arg1Of | values,are |
R42650 | T89591 | T85913 | arg2Of | shown,are |
R7923 | T89591 | T30619 | arg1Of | shown,also |
R25685 | T25884 | T89591 | arg2Of | values,shown |
R58717 | T89591 | T64910 | arg1Of | shown,below. |
R57807 | T29035 | T64910 | arg2Of | Comparison,below. |
R74950 | T29035 | T95898 | arg1Of | Comparison,b |
R36854 | T29035 | T92542 | arg1Of | Comparison,of |
R99157 | T67622 | T92542 | arg2Of | values,of |
R70962 | T67622 | T58043 | arg1Of | values,dN/dS |
R34151 | T29035 | T30617 | arg1Of | Comparison,between |
LitCovid-sample-PD-FMA
Id | Subject | Object | Predicate | Lexical cue | fma_id |
---|---|---|---|---|---|
T73 | 113-123 | Body_part | denotes | Amino-acid | http://purl.org/sig/ont/fma/fma82739 |
T74 | 180-190 | Body_part | denotes | Amino-acid | http://purl.org/sig/ont/fma/fma82739 |
T75 | 220-224 | Body_part | denotes | gene | http://purl.org/sig/ont/fma/fma74402 |
LitCovid-sample-PD-NCBITaxon
Id | Subject | Object | Predicate | Lexical cue | ncbi_taxonomy_id |
---|---|---|---|---|---|
T84 | 156-160 | Species | denotes | SARS | NCBItxid:694009 |
T85 | 165-169 | Species | denotes | MERS | NCBItxid:1335626 |
T86 | 204-208 | Species | denotes | SARS | NCBItxid:694009 |
T87 | 213-217 | Species | denotes | MERS | NCBItxid:1335626 |
LitCovid-sample-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T74 | 31-105 | Sentence | denotes | The S1 and S2 subunits are colored light grey and dark grey, respectively. |
T75 | 106-177 | Sentence | denotes | Fig. 4 Amino-acid sequence diversification across SARS and MERS spikes. |
T76 | 178-235 | Sentence | denotes | a Amino-acid diversity in SARS and MERS S gene sequences. |
LitCovid-sample-PD-MONDO
Id | Subject | Object | Predicate | Lexical cue | mondo_id |
---|---|---|---|---|---|
T41 | 156-160 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
T42 | 204-208 | Disease | denotes | SARS | http://purl.obolibrary.org/obo/MONDO_0005091 |
LitCovid-sample-Pubtator
Id | Subject | Object | Predicate | Lexical cue | pubann:denotes |
---|---|---|---|---|---|
394 | 156-160 | Disease | denotes | SARS | MESH:D045169 |
395 | 165-169 | Disease | denotes | MERS | MESH:D018352 |
410 | 204-208 | Disease | denotes | SARS | MESH:D045169 |
411 | 213-217 | Disease | denotes | MERS | MESH:D018352 |
LitCovid-sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T74 | 31-105 | Sentence | denotes | The S1 and S2 subunits are colored light grey and dark grey, respectively. |
T75 | 106-177 | Sentence | denotes | Fig. 4 Amino-acid sequence diversification across SARS and MERS spikes. |
T76 | 178-235 | Sentence | denotes | a Amino-acid diversity in SARS and MERS S gene sequences. |