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PMC:7253482 / 11970-12147 JSONTXT

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LitCovid-PubTator

Id Subject Object Predicate Lexical cue tao:has_database_id
388 113-117 Disease denotes MERS MESH:D018352
389 140-144 Disease denotes SARS MESH:D045169

LitCovid-PD-FMA-UBERON

Id Subject Object Predicate Lexical cue fma_id
T73 163-176 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925

LitCovid-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T44 140-144 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-PD-CLO

Id Subject Object Predicate Lexical cue
T73 133-135 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11
T74 160-162 http://purl.obolibrary.org/obo/CLO_0053733 denotes 11

LitCovid-PD-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T136 125-127 Chemical denotes ID http://purl.obolibrary.org/obo/CHEBI_141439
T137 152-154 Chemical denotes ID http://purl.obolibrary.org/obo/CHEBI_141439
T138 163-176 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-Enju

Id Subject Object Predicate Lexical cue
T58506 0-3 DT denotes The
T30217 4-13 NN denotes modelling
T24446 14-16 IN denotes of
T64701 17-20 DT denotes the
T32032 21-35 RB denotes experimentally
T87865 36-44 VBN denotes observed
T41472 45-58 NN denotes glycosylation
T75169 59-61 VBZ denotes is
T85671 62-73 VBN denotes illustrated
T14723 74-76 IN denotes on
T33006 77-80 DT denotes the
T74197 81-90 NN denotes prefusion
T74594 91-100 NN denotes structure
T32963 101-103 IN denotes of
T41739 104-112 JJ denotes trimeric
T10224 113-117 NNS denotes MERS
T21879 118-119 NN denotes S
T97449 120-121 -LRB- denotes (
T53301 121-124 NN denotes PDB
T9349 125-127 NN denotes ID
T99864 128-132 NN denotes 5X59
T96751 132-133 -RRB- denotes )
T41923 133-135 CD denotes 11
T4404 136-139 CC denotes and
T91868 140-144 NNP denotes SARS
T72317 145-146 NNP denotes S
T2448 147-148 -LRB- denotes (
T71010 148-151 NN denotes PDB
T12743 152-154 NN denotes ID
T88079 155-159 NN denotes 5X58
T86576 159-160 -RRB- denotes )
T3017 160-162 CD denotes 11
T99799 163-176 NNS denotes glycoproteins
R40464 T30217 T58506 arg1Of modelling,The
R8332 T30217 T24446 arg1Of modelling,of
R34633 T41472 T24446 arg2Of glycosylation,of
R65984 T41472 T64701 arg1Of glycosylation,the
R15545 T87865 T32032 arg1Of observed,experimentally
R55106 T41472 T87865 arg1Of glycosylation,observed
R43509 T30217 T75169 arg1Of modelling,is
R61258 T85671 T75169 arg2Of illustrated,is
R50646 T30217 T85671 arg2Of modelling,illustrated
R71664 T85671 T14723 arg1Of illustrated,on
R49912 T74594 T14723 arg2Of structure,on
R42808 T74594 T33006 arg1Of structure,the
R97100 T74594 T74197 arg1Of structure,prefusion
R17970 T74594 T32963 arg1Of structure,of
R69282 T4404 T32963 arg2Of and,of
R76425 T10224 T41739 arg1Of MERS,trimeric
R29816 T4404 T10224 arg1Of and,MERS
R25583 T41923 T21879 arg1Of 11,S
R46556 T21879 T97449 arg1Of S,(
R93979 T99864 T97449 arg2Of 5X59,(
R9284 T96751 T97449 arg3Of ),(
R65072 T99864 T53301 arg1Of 5X59,PDB
R87543 T99864 T9349 arg1Of 5X59,ID
R90800 T41923 T4404 arg1Of 11,and
R85455 T99799 T4404 arg2Of glycoproteins,and
R63130 T72317 T91868 arg1Of S,SARS
R52854 T99799 T72317 arg1Of glycoproteins,S
R70729 T72317 T2448 arg1Of S,(
R17073 T88079 T2448 arg2Of 5X58,(
R90881 T86576 T2448 arg3Of ),(
R91530 T88079 T71010 arg1Of 5X58,PDB
R18293 T88079 T12743 arg1Of 5X58,ID
R83861 T99799 T3017 arg1Of glycoproteins,11

LitCovid-sample-PD-FMA

Id Subject Object Predicate Lexical cue fma_id
T72 163-176 Body_part denotes glycoproteins http://purl.org/sig/ont/fma/fma62925

LitCovid-sample-CHEBI

Id Subject Object Predicate Lexical cue chebi_id
T105 163-176 Chemical denotes glycoproteins http://purl.obolibrary.org/obo/CHEBI_17089

LitCovid-sample-PD-NCBITaxon

Id Subject Object Predicate Lexical cue ncbi_taxonomy_id
T80 113-117 Species denotes MERS NCBItxid:1335626
T81 140-144 Species denotes SARS NCBItxid:694009

LitCovid-sample-sentences

Id Subject Object Predicate Lexical cue
T71 0-177 Sentence denotes The modelling of the experimentally observed glycosylation is illustrated on the prefusion structure of trimeric MERS S (PDB ID 5X59)11 and SARS S (PDB ID 5X58)11 glycoproteins.

LitCovid-sample-PD-MONDO

Id Subject Object Predicate Lexical cue mondo_id
T39 140-144 Disease denotes SARS http://purl.obolibrary.org/obo/MONDO_0005091

LitCovid-sample-Pubtator

Id Subject Object Predicate Lexical cue pubann:denotes
388 113-117 Disease denotes MERS MESH:D018352
389 140-144 Disease denotes SARS MESH:D045169

LitCovid-sample-UniProt

Id Subject Object Predicate Lexical cue uniprot_id
T3516 163-176 Protein denotes glycoproteins https://www.uniprot.org/uniprot/Q9QSP1|https://www.uniprot.org/uniprot/Q9QJT6|https://www.uniprot.org/uniprot/Q9JGT4|https://www.uniprot.org/uniprot/Q9IPJ6|https://www.uniprot.org/uniprot/Q9DIC6|https://www.uniprot.org/uniprot/Q91DS0|https://www.uniprot.org/uniprot/Q91C28|https://www.uniprot.org/uniprot/Q8QQA2|https://www.uniprot.org/uniprot/Q8QPE5|https://www.uniprot.org/uniprot/Q8QPE4|https://www.uniprot.org/uniprot/Q8QPE3|https://www.uniprot.org/uniprot/Q8JTH0|https://www.uniprot.org/uniprot/Q8BDV6|https://www.uniprot.org/uniprot/Q8B6J6|https://www.uniprot.org/uniprot/Q8B0I1|https://www.uniprot.org/uniprot/Q8B0H6|https://www.uniprot.org/uniprot/Q8B0H1|https://www.uniprot.org/uniprot/Q89669|https://www.uniprot.org/uniprot/Q85213|https://www.uniprot.org/uniprot/Q82706|https://www.uniprot.org/uniprot/Q82683|https://www.uniprot.org/uniprot/Q82020|https://www.uniprot.org/uniprot/Q787B5|https://www.uniprot.org/uniprot/Q77SK0|https://www.uniprot.org/uniprot/Q77N36|https://www.uniprot.org/uniprot/Q76G52|https://www.uniprot.org/uniprot/Q75T09|https://www.uniprot.org/uniprot/Q6X1D5|https://www.uniprot.org/uniprot/Q6X1D1|https://www.uniprot.org/uniprot/Q6TYA0|https://www.uniprot.org/uniprot/Q6E0W7|https://www.uniprot.org/uniprot/Q66T62|https://www.uniprot.org/uniprot/Q5VKP3|https://www.uniprot.org/uniprot/Q5VKN9|https://www.uniprot.org/uniprot/Q5K2K4|https://www.uniprot.org/uniprot/Q5IX93|https://www.uniprot.org/uniprot/Q5IX92|https://www.uniprot.org/uniprot/Q5IX91|https://www.uniprot.org/uniprot/Q5IX90|https://www.uniprot.org/uniprot/Q5IX89|https://www.uniprot.org/uniprot/Q5IX88|https://www.uniprot.org/uniprot/Q5IX87|https://www.uniprot.org/uniprot/Q5GA86|https://www.uniprot.org/uniprot/Q58FH1|https://www.uniprot.org/uniprot/Q4VKV3|https://www.uniprot.org/uniprot/Q4F900|https://www.uniprot.org/uniprot/Q49LL3|https://www.uniprot.org/uniprot/Q49IU2|https://www.uniprot.org/uniprot/Q49IU1|https://www.uniprot.org/uniprot/Q49IT9|https://www.uniprot.org/uniprot/Q49IT8|https://www.uniprot.org/uniprot/Q49AV0|https://www.uniprot.org/uniprot/Q0GBY1|https://www.uniprot.org/uniprot/Q0GBX6|https://www.uniprot.org/uniprot/Q08089|https://www.uniprot.org/uniprot/P32595|https://www.uniprot.org/uniprot/P32550|https://www.uniprot.org/uniprot/P19462|https://www.uniprot.org/uniprot/P16288|https://www.uniprot.org/uniprot/P15199|https://www.uniprot.org/uniprot/P13180|https://www.uniprot.org/uniprot/P0C572|https://www.uniprot.org/uniprot/P08667|https://www.uniprot.org/uniprot/P08163|https://www.uniprot.org/uniprot/P07923|https://www.uniprot.org/uniprot/P04884|https://www.uniprot.org/uniprot/P04883|https://www.uniprot.org/uniprot/P04882|https://www.uniprot.org/uniprot/P03524|https://www.uniprot.org/uniprot/P03522|https://www.uniprot.org/uniprot/O92284|https://www.uniprot.org/uniprot/O56677|https://www.uniprot.org/uniprot/O10236|https://www.uniprot.org/uniprot/J7HBH4|https://www.uniprot.org/uniprot/D8V075|https://www.uniprot.org/uniprot/A7WNB3|https://www.uniprot.org/uniprot/A4UHQ6|https://www.uniprot.org/uniprot/A4UHQ1|https://www.uniprot.org/uniprot/A3RM22|https://www.uniprot.org/uniprot/A3F5R8|https://www.uniprot.org/uniprot/A3F5R3|https://www.uniprot.org/uniprot/A3F5Q8|https://www.uniprot.org/uniprot/A3F5N3|https://www.uniprot.org/uniprot/A3F5M3|https://www.uniprot.org/uniprot/A3F5L8

LitCovid-sample-PD-GO-BP-0

Id Subject Object Predicate Lexical cue
T32 45-58 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sample-GO-BP

Id Subject Object Predicate Lexical cue
T29 45-58 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-PD-GO-BP

Id Subject Object Predicate Lexical cue
T33 45-58 http://purl.obolibrary.org/obo/GO_0070085 denotes glycosylation

LitCovid-sentences

Id Subject Object Predicate Lexical cue
T71 0-177 Sentence denotes The modelling of the experimentally observed glycosylation is illustrated on the prefusion structure of trimeric MERS S (PDB ID 5X59)11 and SARS S (PDB ID 5X58)11 glycoproteins.